RNA–Protein interactions for RNA: ENSMUST00000096127.10

Ccdc50-202, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 1,096 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-202ENSMUST00000096127 Kiaa0100Q5SYL3 2234 aa27.66■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Smarce1O54941 411 aaKnown RBP27.66■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Lnx1O70263 728 aa27.66■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Pik3r1P26450 724 aa27.66■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Irs1P35569 1233 aa27.66■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Lpar1P61793 364 aa27.66■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Meis2P97367 477 aa27.66■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Nlrx1Q3TL44 975 aa27.66■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Hoxa13Q62424 386 aa27.66■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Nxf7Q80SZ6 620 aaKnown RBP27.66■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Usp6nlQ80XC3 819 aa27.66■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 KinQ8K339 391 aa27.66■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Htra3Q9D236 459 aa27.66■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Fyb2A2A995 729 aa27.65■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Rbp3P49194 1234 aa27.65■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Btbd1P58544 488 aa27.65■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Stk11ipQ3TAA7 1072 aa27.65■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Smarcc2Q6PDG5 1213 aa27.65■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Slitrk3Q810B9 980 aa27.65■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 PdgfcQ8CI19 345 aa27.65■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Fubp1Q91WJ8 651 aaKnown RBP27.65■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Gpr37l1Q99JG2 481 aa27.65■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Tob2Q9JM55 345 aa27.65■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Sall1Q9ER74 1322 aa27.65■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Ctdnep1Q3TP92 244 aa27.64■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Limch1Q3UH68 1057 aa27.64■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 Msgn1Q9JK54 188 aa27.64■■■□□ 2.02
Ccdc50-202ENSMUST00000096127 SfnO70456 248 aaKnown RBP27.63■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 RarbP22605 482 aa27.63■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Cep126Q0VBV7 1103 aa27.63■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Spata7Q80VP2 582 aa27.63■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Pramel7Q810Y8 479 aa27.63■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Vmn1r203Q8R273 311 aa27.63■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Rassf3Q99P51 232 aa27.63■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Ubxn8Q9QZ49 277 aa27.63■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Dhx8A2A4P0 1244 aaKnown RBP27.62■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Btnl4A2CG29 586 aa27.62■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 E030030I06RikJ3QML9 246 aa27.62■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Aco1P28271 889 aaKnown RBP27.62■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Ptpn18Q61152 453 aa27.62■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Fam126bQ8C729 530 aa27.62■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 CerkQ8K4Q7 531 aa27.62■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Acat1Q8QZT1 424 aa27.62■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Iffo2Q8R2V2 512 aa27.62■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Plxnb3Q9QY40 1902 aa27.61■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Rnf19bA2A7Q9 732 aa27.61■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Arhgap4B1AUY3 965 aa27.61■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Samd11Q1RNF8 542 aa27.61■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Prmt6Q6NZB1 378 aa27.61■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Tmc1Q8R4P5 757 aa27.61■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Bhmt2Q91WS4 363 aa27.61■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Q9DAQ4 598 aa27.61■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Plod3Q9R0E1 741 aa27.61■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Ttc6G3UYY4 1857 aa27.61■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Pgap3A2A559 320 aa27.6■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 FosP01101 380 aa27.6■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Gna11P21278 359 aa27.6■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Pla2g4eQ50L42 875 aa27.6■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Mybpc2Q5XKE0 1136 aa27.6■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Cyp2c29Q64458 490 aa27.6■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Mcph1Q7TT79 822 aa27.6■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Phtf2Q8CB19 747 aa27.6■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Vwa5aQ99KC8 793 aaKnown RBP27.6■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Chmp4cQ9D7F7 232 aa27.6■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Hic1Q9R1Y5 733 aa27.6■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Ep400Q8CHI8 3072 aaKnown RBP27.59■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Syt1P46096 421 aa27.59■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 A1cfQ5YD48 595 aa27.59■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Hdhd5Q91WM2 419 aa27.59■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Rgs19Q9CX84 216 aa27.59■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Adgrf4Q9D2L6 698 aa27.59■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Cyp27a1Q9DBG1 533 aa27.59■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Oip5A2AQ14 241 aa27.58■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Tmem265E9Q8G3 109 aa27.58■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Kcna2P63141 499 aa27.58■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Mars2Q499X9 586 aaKnown RBP27.58■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Ece1Q4PZA2 769 aa27.58■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Rusc1Q8BG26 893 aa27.58■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 NkrfQ8BY02 690 aaKnown RBP27.58■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Wasf1Q8R5H6 559 aa27.58■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Lrrc2Q8VDB8 371 aa27.58■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Bicd2Q921C5 820 aa27.58■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Npm3Q9CPP0 175 aaKnown RBP27.58■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 Ggps1Q9WTN0 300 aa27.58■■■□□ 2.01
Ccdc50-202ENSMUST00000096127 StamP70297 548 aa27.57■■■□□ 2
Ccdc50-202ENSMUST00000096127 Xxylt1Q3U4G3 392 aa27.57■■■□□ 2
Ccdc50-202ENSMUST00000096127 Kctd3Q8BFX3 815 aa27.57■■■□□ 2
Ccdc50-202ENSMUST00000096127 Gpc2Q8BKV1 579 aa27.57■■■□□ 2
Ccdc50-202ENSMUST00000096127 Lrch3Q8BVU0 778 aa27.57■■■□□ 2
Ccdc50-202ENSMUST00000096127 Yars2Q8BYL4 472 aaKnown RBP27.57■■■□□ 2
Ccdc50-202ENSMUST00000096127 GneQ91WG8 722 aaKnown RBP27.57■■■□□ 2
Ccdc50-202ENSMUST00000096127 PolkQ9QUG2 852 aa27.57■■■□□ 2
Ccdc50-202ENSMUST00000096127 Gm42715A0A087WP63 3095 aaKnown RBP27.56■■■□□ 2
Ccdc50-202ENSMUST00000096127 Zc3h7bF8VPP8 982 aaKnown RBP27.56■■■□□ 2
Ccdc50-202ENSMUST00000096127 Mt-CybP00158 381 aa27.56■■■□□ 2
Ccdc50-202ENSMUST00000096127 Ppfia3P60469 1194 aa27.56■■■□□ 2
Ccdc50-202ENSMUST00000096127 Samhd1Q60710 627 aa27.56■■■□□ 2
Ccdc50-202ENSMUST00000096127 Zbtb9Q8CDC7 459 aa27.56■■■□□ 2
Ccdc50-202ENSMUST00000096127 Btbd7Q8CFE5 1130 aa27.56■■■□□ 2
Ccdc50-202ENSMUST00000096127 GraspQ9JJA9 392 aa27.56■■■□□ 2
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms