RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Calhm6Q8C9E8 313 aa12.8□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Defb36Q8K3U4 67 aa12.8□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Lnx1O70263 728 aa12.8□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Pde11aP0C1Q2 933 aa12.8□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Ftl1P29391 183 aa12.8□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Kctd1Q5M956 257 aa12.8□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Crtc1Q68ED7 630 aa12.8□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Tmc8Q7TN58 722 aa12.8□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Zbed4Q80WQ9 1168 aa12.8□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Ccdc15Q8C9M2 810 aa12.8□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Oaz3Q9R109 243 aa12.8□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Cep290Q6A078 2472 aa12.8□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Gm20425E9Q035 978 aaKnown RBP12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 AlyrefO08583 255 aaKnown RBP12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Prom1O54990 867 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Usp5P56399 858 aaKnown RBP12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Il1rapl1P59823 695 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 GmipQ6PGG2 971 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Brd2Q7JJ13 798 aaKnown RBP12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Znf618Q80YY7 953 aaKnown RBP12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Ece2Q80Z60 881 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 NcaphQ8C156 731 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Alx1Q8C8B0 326 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Bmp2kQ91Z96 1138 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Vwa5aQ99KC8 793 aaKnown RBP12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 JcadQ5DTX6 1320 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Atg4a-psA0A0G2JFS9 396 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 P04214 136 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Lrrc14bQ3UJB3 510 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Grxcr1Q50H32 290 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Vmn1r209Q5NC97 312 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Peg10Q7TN75 958 aaKnown RBP12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Mcph1Q7TT79 822 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Atg4aQ8C9S8 396 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Kcnq3Q8K3F6 873 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Grin3bQ91ZU9 1003 aa12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Smarca5Q91ZW3 1051 aaKnown RBP12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Rbm10Q99KG3 930 aaKnown RBP12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 NkapQ9D0F4 415 aaKnown RBP12.79□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Sbf2E9PXF8 1872 aa12.78□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Ca3P16015 260 aa12.78□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Ccdc85bQ6PDY0 202 aa12.78□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Lmbrd2Q8C561 694 aa12.78□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Kctd12bQ8C7J6 292 aa12.78□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Trpv6Q91WD2 767 aa12.78□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 VillQ91YD6 859 aa12.78□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Mrpl11Q9CQF0 192 aaKnown RBP12.78□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Ggps1Q9WTN0 300 aa12.78□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Mbtps1Q9WTZ2 1052 aa12.78□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Jbts17Q8CE72 3214 aa12.77□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Dock3Q8CIQ7 2027 aa12.77□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Gm13941A2AJ38 245 aa12.77□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 CatspereP0DP43 985 aa12.77□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Ptpn12P35831 775 aa12.77□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Q3TYL0 343 aa12.77□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Fam189a2Q4FZH1 290 aa12.77□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 SdhbQ9CQA3 282 aa12.77□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Pramef12Q9D2F1 463 aa12.77□□□□□ -0.36
Ccdc60-202ENSMUST00000086483 Vwa3bJ9JI28 736 aa12.77□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Il13ra2O88786 383 aa12.77□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Hoxa7P02830 229 aa12.77□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 PtprcP06800 1291 aa12.77□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 A1cfQ5YD48 595 aa12.77□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 DlatQ8BMF4 642 aa12.77□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Erc1Q99MI1 1120 aa12.77□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Themis3Q9CU24 569 aa12.77□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Rnf186Q9D241 226 aa12.77□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Fem1bQ9Z2G0 627 aa12.77□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Col4a4Q9QZR9 1682 aa12.77□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Phlpp2Q8BXA7 1320 aa12.77□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 TriobpQ99KW3 2014 aa12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 P01644 108 aa12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 P01645 108 aa12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 P01646 108 aa12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 P01647 108 aa12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Defa-rs12P50716 91 aa12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 NfibP97863 570 aaKnown RBP12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Esyt1Q3U7R1 1092 aaKnown RBP12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Cnnm4Q69ZF7 771 aa12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Churc1Q6DG52 112 aa12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Tcaf3Q6QR59 914 aa12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Dmtf1Q8CE22 761 aa12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 ChgaP26339 463 aaKnown RBP12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Wdr5P61965 334 aa12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Fbxo10Q7TQF2 950 aa12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 PisdQ8BSF4 406 aa12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Trpm5Q9JJH7 1158 aa12.76□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Gm4924A0A1B0GR71 966 aa12.75□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Tbkbp1A2A9T0 611 aa12.75□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Gcnt4E9Q649 455 aa12.75□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Rps6P62754 249 aaKnown RBP12.75□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Znf865Q3U3I9 1058 aa12.75□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Rnf41Q8BH75 317 aa12.75□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 MslnlQ8C160 685 aa12.75□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Pkp2Q9CQ73 795 aaKnown RBP12.75□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Wfdc11A2A5H7 82 aa12.74□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Cd3dP04235 173 aa12.74□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Eepd1Q3TGW2 569 aa12.74□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 Ccdc82Q6PG04 518 aa12.74□□□□□ -0.37
Ccdc60-202ENSMUST00000086483 BC048507Q80ZS7 89 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms