RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Il21rQ9JHX3 529 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Abt1Q9QYL7 269 aaKnown RBP13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Uts2Q9QZQ3 123 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Fam205a1D3YZF6 1314 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Ccdc88aQ5SNZ0 1873 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 A0A1W2P6Q8 802 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Gm9048A0A1W2P7H4 802 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 A0A1W2P7Z8 802 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Gm9046A0A1W2P855 802 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Kif1cO35071 1100 aaKnown RBP13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Klra7Q60654 280 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Retreg2Q6NS82 541 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Rasa4Q6PFQ7 802 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Ttll4Q80UG8 1193 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Bicd1Q8BR07 835 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Lmbrd2Q8C561 694 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Pcdhga10Q91XY9 930 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Mmtag2Q99LX5 260 aaKnown RBP13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Akap4Q60662 849 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Ankrd13aQ80UP5 588 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Trappc12Q8K2L8 797 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Lrrc42Q8R2U7 421 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Yipf1Q91VU1 306 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Myh14Q6URW6 2000 aa13.38□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Vmn2r68L7N2B3 851 aa13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Sema3eP70275 775 aa13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Usp27Q8CEG8 438 aa13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Glis2Q8VDL9 521 aa13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Xpo4Q9ESJ0 1151 aa13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Znf638Q61464 1960 aaKnown RBP13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Gm21969J3QJZ1 289 aa13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 D1Pas1P16381 660 aa13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Exosc10P56960 887 aaKnown RBP13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Cdcp1Q5U462 833 aa13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Trim25Q61510 634 aaKnown RBP13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Arl13bQ640N2 427 aa13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Ift122Q6NWV3 1182 aa13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Sp8Q8BMJ8 486 aa13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 VmacQ8BP01 174 aa13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Mrfap1Q9CQL7 125 aa13.37□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Proca1B0QZF7 307 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Nova2D3YVV7 556 aaKnown RBP13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Scgb2b7D3YYY1 112 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Trpa1Q8BLA8 1125 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 PawrQ925B0 333 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Psmd6Q99JI4 389 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Wdr19Q3UGF1 1341 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Ccdc152E9PX14 254 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Rpl13P47963 211 aaKnown RBP13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Rrp1P56183 494 aaKnown RBP13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Eef2P58252 858 aaKnown RBP13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Ccdc138Q0VF22 680 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Ehmt1Q5DW34 1296 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Islr2Q5RKR3 745 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 E2f5Q61502 335 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Ncoa7Q6DFV7 943 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Ipo5Q8BKC5 1097 aaKnown RBP13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Me3Q8BMF3 604 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Golph3lQ8R088 285 aaKnown RBP13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Snapc2Q91XA5 359 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Tubb6Q922F4 447 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 HibadhQ99L13 335 aaKnown RBP13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 CrcpO35427 148 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 NapbP28663 298 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 FanccP50652 591 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Fam178bQ24JP3 464 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Hspa4Q61316 841 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Gle1Q8R322 699 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Gpsm2Q8VDU0 679 aa13.36□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Ano3A2AHL1 981 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Ugt1a5B2RT14 529 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Rgl2Q61193 778 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Utp14bQ6EJB6 756 aaKnown RBP13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Ncaph2Q8BSP2 607 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Triml1Q8BVP1 470 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Syap1Q9D5V6 365 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Akap8Q9DBR0 687 aaKnown RBP13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Psma5Q9Z2U1 241 aaKnown RBP13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Gm4985A2ALC6 410 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Akap2O54931 893 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Cct5P80316 541 aaKnown RBP13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Usp28Q5I043 1051 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Cdc37Q61081 379 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 HrQ61645 1182 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Anapc5Q8BTZ4 740 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Agap3Q8VHH5 910 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Abcb6Q9DC29 842 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Jph2Q9ET78 696 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Mtmr7Q9Z2C9 660 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Flvcr1B2RXV4 560 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Zscan18E9PUD6 809 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Rrm1P07742 792 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Myo1fP70248 1099 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Cyb5d1Q5NCY3 228 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 CntrobQ8CB62 887 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 BlmhQ8R016 455 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 ZwintQ9CQU5 252 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 MicalclQ9D5U9 680 aa13.35□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Pdia2D3Z6P0 527 aa13.34□□□□□ -0.27
Upk3b-201ENSMUST00000062606 Stag2O35638 1231 aa13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms