RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Galntl5Q9D4M9 431 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Peg12Q9WVA7 283 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Psma7Q9Z2U0 248 aa10.89□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Chrna9G3X8Z7 479 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Vmn2r71L7N2D8 855 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Npy5rO70342 466 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 GnaqP21279 359 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Actn4P57780 912 aaKnown RBP10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Pdrg1P59048 133 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Rpusd2Q149F1 553 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Acot10Q32MW3 439 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Bbof1Q3V079 533 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ccdc148Q6P5U8 527 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Mettl5Q8K1A0 209 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Rbm5Q91YE7 815 aaKnown RBP10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ndst4Q9EQW8 872 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Arl6ip4Q9JM93 229 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Mtmr9Q9Z2D0 545 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Map3k15A2AQW0 1331 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Plekhg2Q6KAU7 1340 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Gm13023A2A8N2 498 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Bpifb4A2BGH0 617 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 A430078G23RikE9Q7Y4 484 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Sec24cG3X972 1096 aaKnown RBP10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Abcb4P21440 1276 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Wee1P47810 646 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 VrtnQ3SYK4 740 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Cct8l1Q80YT3 562 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ccdc181Q80ZU5 509 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ccdc96Q9CR92 584 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Alpk1Q9CXB8 1231 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ribc1Q9D0B8 379 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ccdc105Q9D4K7 499 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Arid4aF8VPQ2 1261 aaKnown RBP10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Men1O88559 611 aaKnown RBP10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Slurp2P0DP59 97 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 EregQ61521 162 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Cc2d1bQ8BRN9 848 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Glrx3Q9CQM9 337 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ltbp4Q8K4G1 1666 aa10.88□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Mboat4P0C7A3 435 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Eya3P97480 510 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Prpf38aQ4FK66 312 aaKnown RBP10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Tnni3kQ5GIG6 834 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Hook2Q7TMK6 716 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Vipas39Q8BGQ1 491 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 F13a1Q8BH61 732 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Maip1Q8BHE8 291 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Gimap5Q8BWF2 308 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 HibadhQ99L13 335 aaKnown RBP10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Tmem192Q9CXT7 266 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Frmpd4A2AFR3 1320 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Gm7168A0AUV4 508 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Gm3893E9Q1I1 302 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Gjc1P28229 396 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Wdr70Q3TWF6 657 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Kdm7aQ3UWM4 940 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Lrrfip1Q3UZ39 729 aaKnown RBP10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 PnocQ64387 187 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Rpf2Q9JJ80 306 aaKnown RBP10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Tacc2Q9JJG0 1149 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Myh8P13542 1937 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Gucy1b3O54865 620 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 ChkbO55229 394 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ighmbp2P40694 993 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Hmgb1P63158 215 aaKnown RBP10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Oxr1Q4KMM3 866 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Cacnb1Q8R3Z5 597 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Erlin1Q91X78 346 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ubxn1Q922Y1 297 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Plagl2Q925T4 496 aa10.87□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Kndc1Q0KK55 1742 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Folh1O35409 752 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 NfixP70257 488 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Mettl25Q6NXH8 597 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Trim6Q8BGE7 488 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Hirip3Q8BLH7 601 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Fam177a1Q8BR63 207 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Spata16Q8C636 571 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Parp10Q8CIE4 960 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Rhobtb3Q9CTN4 611 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 AacsQ9D2R0 672 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Lrrc32G3XA59 663 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Hps5P59438 1126 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 BcrQ6PAJ1 1270 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 WhrnQ80VW5 918 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ccdc172Q810N9 267 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Igdcc3Q8BQC3 813 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Eno4Q8C042 619 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Rcor2Q8C796 523 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Lmbrd1Q8K0B2 537 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Olfr805Q8VFI4 319 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 VillQ91YD6 859 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Serpinb12Q9D7P9 423 aa10.86□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Gm28919A0A087WP35 240 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ankrd35E9Q9D8 996 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Nlrx1Q3TL44 975 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Esyt2Q3TZZ7 845 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Tmtc1Q3UV71 942 aa10.85□□□□□ -0.67
Ccdc40-202ENSMUST00000053440 Ncapg2Q6DFV1 1138 aa10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms