RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Usp50Q6P8X6 390 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 SkiQ60698 725 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Cfap36Q8C6E0 343 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 CerkQ8K4Q7 531 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Erp44Q9D1Q6 406 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Robo2Q7TPD3 1470 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Kiaa1211Q5PR69 1207 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Slc9a1Q61165 820 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Usp33Q8R5K2 909 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Pde6cQ91ZQ1 861 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 RabggtaQ9JHK4 567 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Gad1P48318 593 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Fam207aP58468 219 aaKnown RBP13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Atp8a1P70704 1164 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Haus4Q8BFT2 363 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ppp2r5dQ91V89 594 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Sh2b1Q91ZM2 756 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Tom1l1Q923U0 474 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Zcchc8Q9CYA6 709 aaKnown RBP13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Sdr42e1Q9D665 394 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 CoasyQ9DBL7 563 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 H2-OaQ9QWV1 250 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Klhl34A2AI76 644 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Acad12D3Z7X0 555 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 XlrP05531 208 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Psmc4P54775 418 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Gm5168Q4KL04 211 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Glra4Q61603 456 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Pabpc4Q6PHQ9 660 aaKnown RBP13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 IarsQ8BU30 1262 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Tbc1d23Q8K0F1 684 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 AticQ9CWJ9 592 aaKnown RBP13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ccdc124Q9D8X2 217 aaKnown RBP13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Nlrp9bQ66X22 1003 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Scyl1Q9EQC5 806 aaKnown RBP13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ercc4Q9QZD4 917 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Grin2dQ03391 1323 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 CemipQ8BI06 1361 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Gm11549A0A286YD83 63 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ccdc85cE9Q6B2 420 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Tnni3P48787 211 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ric8aQ3TIR3 530 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Carmil2Q3V3V9 1296 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 AsnsQ61024 561 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 F13a1Q8BH61 732 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Trerf1Q8BXJ2 1205 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Fam161bQ8CB59 589 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Gtf3c5Q8R2T8 520 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ndufb9Q9CQJ8 179 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Filip1Q9CS72 1211 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 MefvQ9JJ26 767 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Serpinb6eI7HJI3 429 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Pgrmc1O55022 195 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Calb1P12658 261 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Gm10488Q4KL05 212 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Gm14819Q62478 212 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Krt34Q9D646 392 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Tulp1Q9Z273 543 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Cdhr2E9Q7P9 1308 aa13.66□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Gm14525B1AZA0 212 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Gm2012B1B0R1 212 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 GartQ64737 1010 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 GypcQ78HU7 95 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Cdr1E9Q0B4 517 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Srp68Q8BMA6 625 aaKnown RBP13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ccdc87Q8CDL9 855 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 TbcbQ9D1E6 244 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Gfpt2Q9Z2Z9 682 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Tex13cD3YU32 604 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Rad51bO35719 350 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Nr1d1Q3UV55 615 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Exosc10P56960 887 aaKnown RBP13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Irx2P81066 474 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 GabpaQ00422 454 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Trim80Q3V061 624 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Daam2Q80U19 1115 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Sec63Q8VHE0 760 aaKnown RBP13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ankrd2Q9WV06 328 aa13.65□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Mroh8E9PYI4 1049 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Alppl2P24823 529 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Tmem179Q8BHH9 233 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Dhx58Q99J87 678 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Tex21Q9R0U9 575 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Rgs12Q8CGE9 1381 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 LdhbP16125 334 aaKnown RBP13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Nr5a1P33242 462 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 LbrQ3U9G9 626 aaKnown RBP13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Atg9aQ68FE2 551 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Sept9Q80UG5 583 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Mis18aQ9CZJ6 204 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 4930449I24RikQ9D5E3 319 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Sik3Q6P4S6 1311 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Olfr247E9PVJ7 320 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Olfr819K7N727 320 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Sept7O55131 436 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Ap1m1P35585 423 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Ppp2r5eQ61151 467 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Ttll1Q91V51 423 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Pcdhb2Q91Y00 799 aa13.64□□□□□ -0.23
Sdf4-201ENSMUST00000050078 Simc1E9Q6E9 1354 aa13.64□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms