RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Scgb2b12S4R2L0 112 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Cacna2d1O08532 1103 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Nrg3O35181 713 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Nmt2O70311 529 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 MycnP03966 462 aaKnown RBP16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Snrpa1P57784 255 aaKnown RBP16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Lrrc55Q3UY51 311 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Ccp110Q7TSH4 1004 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 H6pdQ8CFX1 789 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Alpk1Q9CXB8 1231 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Sh2b2Q9JID9 621 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Pkd2l2Q9JLG4 621 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Git2Q9JLQ2 708 aa16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 VirmaA2AIV2 1811 aaKnown RBP16.38■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Pkn1P70268 946 aa16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Lrrfip1Q3UZ39 729 aaKnown RBP16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Mcm7Q61881 719 aaKnown RBP16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 EhhadhQ9DBM2 718 aa16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Sipa1l3G3X9J0 1776 aa16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Gap43P06837 227 aa16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Pde4dQ01063 747 aa16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Fkbp3Q62446 224 aaKnown RBP16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Ces1eQ64176 562 aa16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Asic1Q6NXK8 526 aa16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Usp17leQ7M764 540 aa16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Naa15Q80UM3 865 aaKnown RBP16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Gimap7Q8R379 293 aa16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Ube2sQ921J4 223 aa16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Arl2bpQ9D385 163 aa16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Capn9Q9D805 690 aa16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Ndst4Q9EQW8 872 aa16.37■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Bpifb4A2BGH0 617 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Tex13cD3YU32 604 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Clcn6O35454 870 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Ehmt1Q5DW34 1296 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Trim9Q8C7M3 817 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Cep83Q9D5R3 692 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Entpd5Q9WUZ9 427 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Slc39a2G3X943 309 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Vmn2r71L7N2D8 855 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Dynll1P63168 89 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Cracr2aQ3UP38 310 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 VeztQ3ZK22 780 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Cyfip2Q5SQX6 1253 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Mapk6Q61532 720 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Znf280dQ68FE8 974 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Ttc22Q8C159 568 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Lrrc45Q8CIM1 670 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Rhobtb3Q9CTN4 611 aa16.36■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 XlrP05531 208 aa16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Ccnl1Q52KE7 532 aaKnown RBP16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Rhpn1Q61085 643 aa16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Rcor2Q8C796 523 aa16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Tor1aip1Q921T2 595 aaKnown RBP16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Cxcl11Q9JHH5 100 aa16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Arl6ip4Q9JM93 229 aa16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 ChkbO55229 394 aa16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Nol4P60954 483 aa16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Shc3Q61120 474 aa16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Cep131Q62036 1060 aa16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Zic5Q7TQ40 622 aa16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Snip1Q8BIZ6 383 aaKnown RBP16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Slf1Q8R3P9 1054 aa16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Cabp7Q91ZM8 215 aa16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 March8Q9DBD2 286 aa16.35■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Ssc5dQ8BV57 1371 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Apol6B7ZC55 329 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Tmem132bF7BAB2 1078 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Exoc4O35382 975 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Stx8O88983 236 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Tnnc1P19123 161 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Nf2P46662 596 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Mtss1lQ6P9S0 715 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Haus4Q8BFT2 363 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Tmem143Q8VD26 458 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Arfgap2Q99K28 520 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Lrrc57Q9D1G5 239 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Greb1lB9EJV3 1913 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Kiaa1522A2A7S8 1013 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Akr1c19G3X9Y6 323 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Prl2c2P04095 224 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 GclcP97494 637 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Acot10Q32MW3 439 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Specc1Q5SXY1 1067 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Foxd1Q61345 456 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Myo6Q64331 1265 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 GlyctkQ8QZY2 523 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 MlphQ91V27 590 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 Trub2Q91WG3 331 aaKnown RBP16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 MefvQ9JJ26 767 aa16.34■□□□□ 0.21
Ushbp1-201ENSMUST00000049184 GakQ99KY4 1305 aa16.33■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Prl7d1P04769 244 aa16.33■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Hspa9P38647 679 aaKnown RBP16.33■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Pdrg1P59048 133 aa16.33■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Slc7a3P70423 618 aa16.33■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Tbc1d2bQ3U0J8 965 aa16.33■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Sh3gl1Q62419 368 aa16.33■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Tlr13Q6R5N8 991 aa16.33■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Ublcp1Q8BGR9 318 aa16.33■□□□□ 0.2
Ushbp1-201ENSMUST00000049184 Rbm19Q8R3C6 952 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms