RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 D830030K20RikE9PYQ5 218 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gm3043K7N693 218 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gm16440K7N6G6 218 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gm2244L7N2A3 218 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gm3278L7N2D2 218 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gm8271L7N2E2 218 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Nom1Q3UFM5 854 aaKnown RBP13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Adgrg6Q6F3F9 1165 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 WdpcpQ8C456 722 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 CtsqQ91ZF4 343 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Thap12Q9CUX1 758 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Bcs1lQ9CZP5 418 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ubr1O70481 1757 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Tnnc2P20801 160 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gna14P30677 355 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Nr5a1P33242 462 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Mtx1P47802 317 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Pla2g4eQ50L42 875 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Specc1Q5SXY1 1067 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Cyp4x1Q6A152 507 aa13.06□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Frmd7A2AD83 703 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Psmd14O35593 310 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Nr2f2P43135 414 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Tmod1P49813 359 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Tfdp1Q08639 410 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ctdnep1Q3TP92 244 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Slc9c1Q6UJY2 1175 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Lrrc8aQ80WG5 810 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Scfd2Q8BTY8 684 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gramd4Q8CB44 633 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ccdc83Q9D4V3 305 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Pdzd4Q9QY39 772 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Zfp804bA0A0G2JGH6 1343 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Cyp11b2P15539 500 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Aco1P28271 889 aaKnown RBP13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ovgp1Q62010 721 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Arhgap10Q6Y5D8 786 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Tex2Q6ZPJ0 1128 aaKnown RBP13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Cnksr2Q80YA9 1032 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Osbpl2Q8BX94 484 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ulk4Q3V129 1303 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ric8aQ3TIR3 530 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Trim6Q8BGE7 488 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ehd2Q8BH64 543 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Adgra1Q8C4G9 578 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 C8aQ8K182 587 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 NktrP30415 1453 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gm4297D3YWB7 211 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 OatP29758 439 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 YwhaeP62259 255 aaKnown RBP13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gm3414Q3TNU4 584 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Skiv2lQ6NZR5 1244 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 GypcQ78HU7 95 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Akt3Q9WUA6 479 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Cnbd1B1AWM0 430 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Pcdhb14Q6PB90 796 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Fez2Q6TYB5 348 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gprasp2Q8BUY8 826 aa13.05□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Adcy7P51829 1099 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Q3TTJ4 293 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 HarsQ61035 509 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ezh2Q61188 746 aaKnown RBP13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Atp1a2Q6PIE5 1020 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Trex1Q91XB0 314 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Eif4enif1Q9EST3 983 aaKnown RBP13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Itsn1Q9Z0R4 1714 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Serpinb8O08800 374 aaKnown RBP13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gna15P30678 374 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ppp2r5aQ6PD03 486 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Krt7Q9DCV7 457 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Serpinb6bO08804 377 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Krt19P19001 403 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Hoxc10P31257 342 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Tubb2aQ7TMM9 445 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 RalylQ8BTF8 293 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Trim59Q922Y2 403 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Tubb2bQ9CWF2 445 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Dctpp1Q9QY93 170 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gm42641I6L9G2 585 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 CtshP49935 333 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 AtripQ8BMG1 785 aa13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Eef1gQ9D8N0 437 aaKnown RBP13.04□□□□□ -0.32
Pcif1-201ENSMUST00000041643 C87977A2A958 498 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gm9992B2RWK3 458 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 SfnO70456 248 aaKnown RBP13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Cap1P40124 474 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 SbdsP70122 250 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Unc93aQ710D3 458 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Cnot7Q60809 285 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Nrbp1Q99J45 535 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Gm7356A0A087WSA6 508 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 1700003F12RikA2AKE5 210 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Usp17lbE9Q9U0 468 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Calb1P12658 261 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Zdhhc9P59268 364 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Avpr1aQ62463 423 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Ppp2r2cQ8BG02 447 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 AsphQ8BSY0 741 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 Fbxo18Q8K2I9 1042 aa13.03□□□□□ -0.32
Pcif1-201ENSMUST00000041643 CpzQ8R4V4 654 aa13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms