RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gm28919A0A087WP35 240 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Vmn2r71L7N2D8 855 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Armc2Q3URY6 854 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ccdc157Q5SPX1 718 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Exoc3Q6KAR6 755 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Phf8Q80TJ7 1023 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 LRWD1Q8BUI3 648 aaKnown RBP14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Cgref1Q8R1U2 281 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Msantd4Q91YU3 345 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Lztr1Q9CQ33 837 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ndst4Q9EQW8 872 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Pkd2l2Q9JLG4 621 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Zc3h12cQ5DTV4 884 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ddx3xQ62167 662 aaKnown RBP14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Zrsr2Q62377 462 aaKnown RBP14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Zkscan3Q91VW9 553 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Alpk1Q9CXB8 1231 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Efhd1Q9D4J1 240 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Myh15E9Q264 1925 aa14.91□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ankrd35E9Q9D8 996 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ces1eQ64176 562 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Dlg1Q811D0 905 aaKnown RBP14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Rab11fip4Q8BQP8 635 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Tut1Q8R3F9 869 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 VillQ91YD6 859 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 4930550L24RikQ99PA7 320 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Six6os1Q9CTN5 574 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Arl6ip4Q9JM93 229 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Mtmr9Q9Z2D0 545 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Hnrnph3D3Z3N4 346 aaKnown RBP14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ighmbp2P40694 993 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Scg2Q03517 617 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 EregQ61521 162 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Traf3ip3Q8C0G2 513 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 GlyctkQ8QZY2 523 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 HyiQ8R1F5 277 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Ppp2r5dQ91V89 594 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Rhobtb3Q9CTN4 611 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Angptl3Q9R182 455 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Gja10Q9WUS4 505 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Homer1Q9Z2Y3 366 aa14.9□□□□□ -0.02
Nup88-201ENSMUST00000035283 Myh8P13542 1937 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Bpifb4A2BGH0 617 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 CltaO08585 235 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Men1O88559 611 aaKnown RBP14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Acot10Q32MW3 439 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Trim43aQ3TL54 445 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Lrrc41Q8K1C9 807 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Acot3Q9QYR7 432 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Psmd10Q9Z2X2 231 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Gm7356A0A087WSA6 508 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Bicdl1A0JNT9 577 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Tcp1P11983 556 aaKnown RBP14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Znf827Q505G8 1078 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Islr2Q5RKR3 745 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Slc13a4Q8BZ82 625 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Rcor2Q8C796 523 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Glrx3Q9CQM9 337 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Cmtr1Q9DBC3 837 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Myh4Q5SX39 1939 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Frmpd4A2AFR3 1320 aa14.89□□□□□ -0.03
Nup88-201ENSMUST00000035283 Stox1B2RQL2 990 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Cd44P15379 778 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Lig1P37913 916 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Hsd17b1P51656 344 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Pdrg1P59048 133 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 HmmrQ00547 794 aaKnown RBP14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Mapk6Q61532 720 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Rufy1Q8BIJ7 712 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Spats2Q8K1N4 545 aaKnown RBP14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Ube2sQ921J4 223 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Ddx47Q9CWX9 455 aaKnown RBP14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Ascc1Q9D8Z1 356 aaKnown RBP14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Sel1lQ9Z2G6 790 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Rasa2P58069 847 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Hmgb1P63158 215 aaKnown RBP14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Hdhd2Q3UGR5 259 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Ankrd24Q80VM7 985 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Ndufab1Q9CR21 156 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Ppp1r3gQ9CW07 347 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Lrrc57Q9D1G5 239 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Eef1gQ9D8N0 437 aaKnown RBP14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Plcb1Q9Z1B3 1216 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Zmym2Q9CU65 1376 aa14.88□□□□□ -0.03
Nup88-201ENSMUST00000035283 Nup98Q6PFD9 1816 aaKnown RBP14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 ChkbO55229 394 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Acsbg2Q2XU92 667 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Nlrx1Q3TL44 975 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Rnpc3Q3UZ01 514 aaKnown RBP14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Foxd1Q61345 456 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Krt74Q6IFZ9 495 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Tlr13Q6R5N8 991 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Ppm1eQ80TL0 749 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Igdcc3Q8BQC3 813 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 NkrfQ8BY02 690 aaKnown RBP14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Rab3il1Q8VDV3 383 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Alg1Q921Q3 482 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Pla2g12bQ99P27 195 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Cd274Q9EP73 290 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Pabpc1lA2A5N3 607 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms