RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Cplx3Q8R1B5 158 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Q922C1 641 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Stag1Q9D3E6 1258 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 3830403N18RikQ9D6C3 208 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ascc1Q9D8Z1 356 aaKnown RBP12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Rims2Q9EQZ7 1530 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 1700029H14RikE9PY36 240 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ca8P28651 291 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Krt42Q6IFX2 452 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Rbm26Q6NZN0 1012 aaKnown RBP12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Lrrc45Q8CIM1 670 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Sirt2Q8VDQ8 389 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Scrn1Q9CZC8 414 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Git2Q9JLQ2 708 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Igsf9bE9PZ19 1328 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Stag2O35638 1231 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Tal1P22091 329 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Dhx37Q6NZL1 1150 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Rbm15bQ6PHZ5 887 aaKnown RBP12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Slfnl1Q8BHW9 410 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Fam228aQ8CDW1 299 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ctnnbl1Q9CWL8 563 aaKnown RBP12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Adgrb1Q3UHD1 1582 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Gap43P06837 227 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ppp2r5bQ6PD28 497 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Bicd1Q8BR07 835 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Lgi2Q8K4Z0 550 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Psma8Q9CWH6 250 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Capn9Q9D805 690 aa12.48□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Tuft1O08970 390 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Acot10Q32MW3 439 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Lrrc36Q3V0M2 755 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Fnbp1Q80TY0 616 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Iws1Q8C1D8 766 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ints5Q8CHT3 1018 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Parp10Q8CIE4 960 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 SarnpQ9D1J3 210 aaKnown RBP12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Simc1E9Q6E9 1354 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Tdo2P48776 406 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Slc9a2Q3ZAS0 814 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Map7d1A2AJI0 846 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ccdc152E9PX14 254 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Nr1i2O54915 431 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 XlrP05531 208 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Csgalnact2Q8C1F4 542 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Olfr805Q8VFI4 319 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Q3TYL0 343 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Fgd5Q80UZ0 1219 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Kif17Q99PW8 1038 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 IqcdQ9D3V1 458 aa12.47□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Stat5bP42232 786 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Krt15Q61414 452 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Lmbrd1Q8K0B2 537 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ifih1Q8R5F7 1025 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Dr1Q91WV0 176 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 AacsQ9D2R0 672 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Slc40a1Q9JHI9 570 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Kcnq5Q9JK45 933 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Klra17Q9JMA4 273 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ccnt1Q9QWV9 724 aaKnown RBP12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 GgcxQ9QYC7 757 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Ankrd2Q9WV06 328 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Adamts7Q68SA9 1657 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Scgb2b19J3QM75 112 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 GnaqP21279 359 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Mum1l1Q4VA55 681 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 AopepQ8BXQ6 817 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Smc6Q924W5 1097 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Haus4Q8BFT2 363 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Mtfr1lQ9CWE0 289 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Snrnp35Q9D384 244 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 NapaQ9DB05 295 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Klf15Q9EPW2 415 aa12.46□□□□□ -0.41
Topbp1-201ENSMUST00000035164 Men1O88559 611 aaKnown RBP12.46□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Tbc1d1Q60949 1255 aa12.46□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Lrrn2Q6PHP6 730 aa12.46□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Rexo1Q7TT28 1213 aa12.46□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Stkld1Q80YS9 662 aa12.46□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Fbxo18Q8K2I9 1042 aa12.46□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Arl2bpQ9D385 163 aa12.46□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Nme9A0A1L1SUL6 329 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Akr1b10G5E895 316 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Arhgap6O54834 987 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Igf2bp2Q5SF07 592 aaKnown RBP12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 GlyctkQ8QZY2 523 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Eps8l1Q8R5F8 716 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Usp11Q99K46 921 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Cyp2c23E9Q5K4 494 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Gna11P21278 359 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 MagohP61327 146 aaKnown RBP12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Sh3gl1Q62419 368 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Ube3cQ80U95 1083 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Setdb2Q8C267 713 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 MagohbQ9CQL1 146 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Angptl3Q9R182 455 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Tmem132bF7BAB2 1078 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Kif5cP28738 956 aaKnown RBP12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Tmprss11aQ3UQ41 389 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Papd7Q6PB75 542 aa12.45□□□□□ -0.42
Topbp1-201ENSMUST00000035164 Znf526Q8BI66 675 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms