RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 RilpQ5ND29 369 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 NfkbibQ60778 359 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Cyp7b1Q60991 507 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 SpopQ6ZWS8 374 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Miga2Q8BK03 593 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Usp15Q8R5H1 981 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 CalcbQ99MP3 130 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Sept12Q9D451 317 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 3830403N18RikQ9D6C3 208 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Phkg2Q9DB30 406 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 1700122O11RikJ3QPW6 241 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Trove2O08848 538 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Lrrc4bP0C192 709 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Gpr182P43142 395 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Dynll1P63168 89 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Fmnl3Q6ZPF4 1028 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Lgi2Q8K4Z0 550 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Calml4Q91WQ9 153 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Entpd5Q9WUZ9 427 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Pacsin2Q9WVE8 486 aaKnown RBP11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Plcb1Q9Z1B3 1216 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Mapk6Q61532 720 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Birc2Q62210 612 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Pabpc4Q6PHQ9 660 aaKnown RBP11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Slx1bQ8BX32 270 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Klhl20Q8VCK5 604 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Apopt1Q9CQW7 192 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Cib2Q9Z309 187 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Myo5bP21271 1818 aa11.74□□□□□ -0.53
Rnf40-201ENSMUST00000033088 RaraP11416 462 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Asic4Q7TNS7 539 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Vat1lQ80TB8 417 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Anks1bQ8BIZ1 1259 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Cep95Q8BVV7 827 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Pde3aQ9Z0X4 1141 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Chmp6P0C0A3 200 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 BC051142Q3V0M8 400 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Sestd1Q80UK0 696 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Ldlrap1Q8C142 308 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Csgalnact2Q8C1F4 542 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Ccnt1Q9QWV9 724 aaKnown RBP11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Ccdc174Q3U155 467 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 FntaQ61239 377 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Fchsd1Q6PFY1 688 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Tas2r124Q7M718 309 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Smim5Q8BT42 78 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Krt79Q8VED5 531 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Ccdc97Q9DBT3 340 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Zranb2Q9R020 330 aaKnown RBP11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Pard3Q99NH2 1333 aa11.73□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Foxn2E9Q7L6 429 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Casp8O89110 480 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Gap43P06837 227 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Nkx2-5P42582 318 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Igfbp6P47880 238 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Fhdc1Q3ULZ2 1149 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Rnpc3Q3UZ01 514 aaKnown RBP11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 HelbQ6NVF4 1074 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Spata24Q6P926 205 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Sp8Q8BMJ8 486 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Znf76Q8BMU0 568 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Arhgef6Q8K4I3 771 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 ArpinQ9D0A3 226 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Lrp2bpQ9D4C6 346 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Ascc1Q9D8Z1 356 aaKnown RBP11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Col1a2Q01149 1372 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Olfr310B2RVZ1 332 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Zfand4D3Z3C6 739 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Cyp2d34L7N463 504 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Tcp1P11983 556 aaKnown RBP11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Hcls1P49710 486 aaKnown RBP11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Actn4P57780 912 aaKnown RBP11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Gbp1Q01514 589 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Znf827Q505G8 1078 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Adcy2Q80TL1 1090 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Iws1Q8C1D8 766 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Q8C1R3 189 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Snx24Q9CRB0 169 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Krt24A1L317 512 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Tubb4bP68372 445 aaKnown RBP11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Sco1Q5SUC9 284 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Apbb1ipQ8R5A3 670 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Uap1Q91YN5 522 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 EpgnQ924X1 152 aa11.72□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Parp1P11103 1013 aaKnown RBP11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Cracr2aQ3UP38 310 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Cct6bQ61390 531 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Foxo6Q70KY4 559 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Daam2Q80U19 1115 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 AsphQ8BSY0 741 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Gpcpd1Q8C0L9 675 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Taf6lQ8R2K4 616 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Rev1Q920Q2 1249 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Gucy1a2F8VQK3 730 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Prl2c3P04768 224 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Cep126Q0VBV7 1103 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Psmd1Q3TXS7 953 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Micall1Q8BGT6 870 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Armcx3Q8BHS6 379 aa11.71□□□□□ -0.53
Rnf40-201ENSMUST00000033088 Kcns3Q8BQZ8 491 aa11.71□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms