RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Vti1aO89116 217 aa13.27□□□□□ -0.28
Ctr9-201ENSMUST00000005749 Mtx1P47802 317 aa13.27□□□□□ -0.28
Ctr9-201ENSMUST00000005749 Atp1a2Q6PIE5 1020 aa13.27□□□□□ -0.28
Ctr9-201ENSMUST00000005749 Phf20Q8BLG0 1010 aaKnown RBP13.27□□□□□ -0.28
Ctr9-201ENSMUST00000005749 Prpf6Q91YR7 941 aaKnown RBP13.27□□□□□ -0.28
Ctr9-201ENSMUST00000005749 PycardQ9EPB4 193 aa13.27□□□□□ -0.28
Ctr9-201ENSMUST00000005749 B3galt4Q9Z0F0 371 aa13.27□□□□□ -0.28
Ctr9-201ENSMUST00000005749 Lgr5Q9Z1P4 907 aa13.27□□□□□ -0.28
Ctr9-201ENSMUST00000005749 Pnpla7A2AJ88 1352 aa13.27□□□□□ -0.28
Ctr9-201ENSMUST00000005749 Tex13cD3YU32 604 aa13.27□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Gm10110D3Z5M2 615 aa13.27□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Scnn1aQ61180 699 aa13.27□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Nucks1Q80XU3 234 aaKnown RBP13.27□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Ankk1Q8BZ25 745 aa13.27□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Gpsm2Q8VDU0 679 aa13.27□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Cbx6Q9DBY5 414 aa13.27□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Tmod3Q9JHJ0 352 aa13.27□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Lztfl1Q9JHQ5 299 aa13.27□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Top1Q04750 767 aaKnown RBP13.27□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Haus1Q8BHX1 278 aa13.27□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Col23a1Q8K4G2 532 aa13.27□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Tspyl4Q8VD63 406 aa13.27□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Fgl2P12804 432 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Ptgs1P22437 602 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Lins1Q3U1D0 764 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 RalylQ8BTF8 293 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 ErmardE9Q048 622 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Cpsf2O35218 782 aaKnown RBP13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Surf1P09925 306 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Tmod1P49813 359 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Rhbdl3P58873 404 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Ubn1Q4G0F8 1135 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Slc9c1Q6UJY2 1175 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Mrgprx1Q8CIP3 322 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Atp1a1Q8VDN2 1023 aaKnown RBP13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 YarsQ91WQ3 528 aaKnown RBP13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Dph5Q9CWQ0 281 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Mad2l2Q9D752 211 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Zfyve19Q9DAZ9 389 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Mroh9G5E8L9 891 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Hoxc10P31257 342 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Bbof1Q3V079 533 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Akap4Q60662 849 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Vps52Q8C754 723 aaKnown RBP13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Glis2Q8VDL9 521 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Plcg1Q62077 1302 aa13.26□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Peg10Q7TN75 958 aaKnown RBP13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Fam204aQ8C6C7 236 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Vmn1r191Q8K4D0 298 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Gtf3c5Q8R2T8 520 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Smc1bQ920F6 1248 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Rtkn2Q14B46 604 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Nsun2Q1HFZ0 757 aaKnown RBP13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Gzf1Q4VBD9 706 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Usp49Q6P9L4 685 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 ClasrpQ8CFC7 668 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Tsnaxip1Q99P25 704 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 CoasyQ9DBL7 563 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Pdzd4Q9QY39 772 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Camta1A2A891 1682 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Krt19P19001 403 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Pik3r1P26450 724 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Cdh15P33146 784 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Ccdc148Q6P5U8 527 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Snd1Q78PY7 910 aaKnown RBP13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Haus7Q8BKT8 364 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Gjd4Q8BSD4 364 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Zhx2Q8C0C0 836 aaKnown RBP13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Tor1aip1Q921T2 595 aaKnown RBP13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Elf2Q9JHC9 593 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Cd2apQ9JLQ0 637 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Magi2Q9WVQ1 1275 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Q3TTJ4 293 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Elp3Q9CZX0 547 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Mms19Q9D071 1031 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Cyp2s1Q9DBX6 501 aa13.25□□□□□ -0.29
Ctr9-201ENSMUST00000005749 CnpP16330 420 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Lmntd2Q0VET5 664 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Rbm41Q8JZV4 413 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 1700020D05RikQ99PB1 294 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Serpinb12Q9D7P9 423 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Rbm6S4R1W5 1118 aaKnown RBP13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Usp32F8VPZ3 1604 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Map1bP14873 2464 aaKnown RBP13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 DgkiD3YWQ0 1071 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Gm2030D3Z7C4 212 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Zfp408H7BX78 710 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Zfpm1O35615 995 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Trip13Q3UA06 432 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Myo19Q5SV80 963 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Dpp9Q8BVG4 862 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Tmx4Q8C0L0 335 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 CtsqQ91ZF4 343 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Serpinb3bQ9D1Q5 387 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 1700016D06RikQ9DAA5 166 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Kiaa1468Q148V7 1216 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Samhd1Q60710 627 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Mysm1Q69Z66 819 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Ushbp1Q8R370 680 aa13.24□□□□□ -0.29
Ctr9-201ENSMUST00000005749 Flvcr1B2RXV4 560 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms