RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 ESA1Q08649 445 aa1.38□□□□□ -2.19
snR49snR49 MPD2Q99316 277 aa1.38□□□□□ -2.19
snR49snR49 VCX1Q99385 411 aa1.38□□□□□ -2.19
snR49snR49 HIP1P06775 603 aa1.37□□□□□ -2.19
snR49snR49 PIM1P36775 1133 aa1.37□□□□□ -2.19
snR49snR49 SEC24P40482 926 aaKnown RBP1.37□□□□□ -2.19
snR49snR49 ALT2P52892 507 aa1.37□□□□□ -2.19
snR49snR49 BUD32P53323 261 aa1.37□□□□□ -2.19
snR49snR49 SLD5Q03406 294 aa1.37□□□□□ -2.19
snR49snR49 VPS74Q06385 345 aa1.37□□□□□ -2.19
snR49snR49 WTM1Q12363 437 aaKnown RBP1.37□□□□□ -2.19
snR49snR49 TPK1P06244 397 aa1.36□□□□□ -2.19
snR49snR49 ERG8P24521 451 aa1.36□□□□□ -2.19
snR49snR49 CPR4P25334 318 aa1.36□□□□□ -2.19
snR49snR49 DIA4P38705 446 aaPredicted RBP1.36□□□□□ -2.19
snR49snR49 NPR3P38742 1146 aa1.36□□□□□ -2.19
snR49snR49 ELO1P39540 310 aa1.36□□□□□ -2.19
snR49snR49 BUR6P40096 142 aa1.36□□□□□ -2.19
snR49snR49 TMA108P40462 946 aa1.36□□□□□ -2.19
snR49snR49 IME4P41833 600 aa1.36□□□□□ -2.19
snR49snR49 YFL067WP43537 175 aa1.36□□□□□ -2.19
snR49snR49 IRC15Q02733 499 aa1.36□□□□□ -2.19
snR49snR49 RTT109Q07794 436 aa1.36□□□□□ -2.19
snR49snR49 PSK2Q08217 1101 aa1.36□□□□□ -2.19
snR49snR49 BI3Q9ZZW7 517 aa1.36□□□□□ -2.19
snR49snR49 YBR085C-AO43137 85 aa1.35□□□□□ -2.19
snR49snR49 PEP5P12868 1029 aa1.35□□□□□ -2.19
snR49snR49 VPS27P40343 622 aaKnown RBP1.35□□□□□ -2.19
snR49snR49 HIS6P40545 261 aa1.35□□□□□ -2.19
snR49snR49 DUG3P53871 357 aa1.35□□□□□ -2.19
snR49snR49 SHR3Q02774 210 aa1.35□□□□□ -2.19
snR49snR49 TSR1Q07381 788 aaKnown RBP1.35□□□□□ -2.19
snR49snR49 HSP26P15992 214 aaKnown RBP RIP-Chip data1.34□□□□□ -2.19not detected
snR49snR49 YCR007CP25354 239 aa1.34□□□□□ -2.19
snR49snR49 YKL133CP36066 463 aa1.34□□□□□ -2.19
snR49snR49 BMT2P38278 337 aa1.34□□□□□ -2.19
snR49snR49 PSD1P39006 500 aa1.34□□□□□ -2.19
snR49snR49 IST3P40565 148 aaPredicted RBP1.34□□□□□ -2.19
snR49snR49 GWT1P47026 490 aa1.34□□□□□ -2.19
snR49snR49 TOF1P53840 1238 aa1.34□□□□□ -2.19
snR49snR49 REG1Q00816 1014 aa1.34□□□□□ -2.19
snR49snR49 PIR3Q03180 325 aa1.34□□□□□ -2.19
snR49snR49 YBL111CQ3E7Y5 667 aa1.34□□□□□ -2.19
snR49snR49 PET123P17558 318 aa1.33□□□□□ -2.2
snR49snR49 SDH3P33421 198 aa1.33□□□□□ -2.2
snR49snR49 PSF2P40359 213 aa1.33□□□□□ -2.2
snR49snR49 INA17Q02888 182 aa1.33□□□□□ -2.2
snR49snR49 HRI1Q05905 244 aaKnown RBP1.33□□□□□ -2.2
snR49snR49 TEN1Q07921 160 aa1.33□□□□□ -2.2
snR49snR49 THP3Q12049 470 aaKnown RBP1.33□□□□□ -2.2
snR49snR49 BUD5P25300 642 aaPredicted RBP1.32□□□□□ -2.2
snR49snR49 MRPL36P36531 177 aa1.32□□□□□ -2.2
snR49snR49 VPS4P52917 437 aa1.32□□□□□ -2.2
snR49snR49 DRN1P53255 507 aaKnown RBP1.32□□□□□ -2.2
snR49snR49 CAF40P53829 373 aa1.32□□□□□ -2.2
snR49snR49 IVY1Q04934 453 aa1.32□□□□□ -2.2
snR49snR49 LEU9Q12166 604 aaKnown RBP1.32□□□□□ -2.2
snR49snR49 LSP1Q12230 341 aaKnown RBP1.32□□□□□ -2.2
snR49snR49 GAL1P04385 528 aa1.31□□□□□ -2.2
snR49snR49 YCL049CP25577 312 aa1.31□□□□□ -2.2
snR49snR49 YKL097CP34245 136 aa1.31□□□□□ -2.2
snR49snR49 YKL023WP36103 277 aaKnown RBP1.31□□□□□ -2.2
snR49snR49 PAN6P40459 309 aa1.31□□□□□ -2.2
snR49snR49 YJR154WP47181 346 aa1.31□□□□□ -2.2
snR49snR49 RPS7BP48164 190 aaKnown RBP1.31□□□□□ -2.2
snR49snR49 DSD1P53095 428 aa1.31□□□□□ -2.2
snR49snR49 MET14Q02196 202 aa1.31□□□□□ -2.2
snR49snR49 NCE102Q12207 173 aaRIP-Chip data1.31□□□□□ -2.2not detected
snR49snR49 SUC2P00724 532 aa1.3□□□□□ -2.2
snR49snR49 RAD16P31244 790 aa1.3□□□□□ -2.2
snR49snR49 YKL100CP34248 587 aa1.3□□□□□ -2.2
snR49snR49 NAT2P37293 288 aa1.3□□□□□ -2.2
snR49snR49 KTR3P38130 404 aaPredicted RBP1.3□□□□□ -2.2
snR49snR49 IFA38P38286 347 aa1.3□□□□□ -2.2
snR49snR49 YNG2P38806 282 aaKnown RBP1.3□□□□□ -2.2
snR49snR49 TIF4631P39935 952 aaKnown RBP1.3□□□□□ -2.2
snR49snR49 FAU1P40099 211 aa1.3□□□□□ -2.2
snR49snR49 ELP2P42935 788 aa1.3□□□□□ -2.2
snR49snR49 DIA3P52290 468 aa1.3□□□□□ -2.2
snR49snR49 ARC35P53731 342 aaKnown RBP1.3□□□□□ -2.2
snR49snR49 DOS2P54858 310 aa1.3□□□□□ -2.2
snR49snR49 RSN1Q03516 953 aa1.3□□□□□ -2.2
snR49snR49 NUC1P08466 329 aa1.29□□□□□ -2.2
snR49snR49 EXO70P19658 623 aa1.29□□□□□ -2.2
snR49snR49 PWP1P21304 576 aaKnown RBP1.29□□□□□ -2.2
snR49snR49 SYN8P31377 255 aa1.29□□□□□ -2.2
snR49snR49 UTR4P32626 227 aa1.29□□□□□ -2.2
snR49snR49 GCD10P41814 478 aa1.29□□□□□ -2.2
snR49snR49 RRT5P43607 289 aa1.29□□□□□ -2.2
snR49snR49 TAN1P53072 289 aaPredicted RBP1.29□□□□□ -2.2
snR49snR49 ART5P53244 586 aaKnown RBP1.29□□□□□ -2.2
snR49snR49 PIL1P53252 339 aaKnown RBP1.29□□□□□ -2.2
snR49snR49 MSC1Q03104 513 aa1.29□□□□□ -2.2
snR49snR49 MUB1Q03162 620 aa1.29□□□□□ -2.2
snR49snR49 SKG3Q06315 1026 aa1.29□□□□□ -2.2
snR49snR49 PHO92Q06390 306 aa1.29□□□□□ -2.2
snR49snR49 ETT1Q08421 412 aaKnown RBP1.29□□□□□ -2.2
snR49snR49 YOR365CQ08844 703 aa1.29□□□□□ -2.2
snR49snR49 NUS1Q12063 375 aa1.29□□□□□ -2.2
snR49snR49 YLR108CQ12259 485 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms