RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 COS4P43542 379 aa-1.75□□□□□ -2.69
snR40snR40 EPL1P43572 832 aa-1.75□□□□□ -2.69
snR40snR40 OCA1P50946 238 aaPredicted RBP-1.75□□□□□ -2.69
snR40snR40 YGR079WP53249 370 aa-1.75□□□□□ -2.69
snR40snR40 GOR1P53839 350 aa-1.75□□□□□ -2.69
snR40snR40 MRPL51Q06090 140 aaPredicted RBP-1.75□□□□□ -2.69
snR40snR40 MLC2Q06580 163 aa-1.75□□□□□ -2.69
snR40snR40 VCX1Q99385 411 aa-1.75□□□□□ -2.69
snR40snR40 TPI1P00942 248 aaKnown RBP-1.76□□□□□ -2.69
snR40snR40 PET111P08468 800 aa-1.76□□□□□ -2.69
snR40snR40 AEP2P22136 580 aa-1.76□□□□□ -2.69
snR40snR40 MIG1P27705 504 aa-1.76□□□□□ -2.69
snR40snR40 ESL2P36168 1195 aa-1.76□□□□□ -2.69
snR40snR40 MMS21P38632 267 aa-1.76□□□□□ -2.69
snR40snR40 MDR1P53258 950 aa-1.76□□□□□ -2.69
snR40snR40 KTR6P54070 446 aa-1.76□□□□□ -2.69
snR40snR40 LDS2Q08218 356 aa-1.76□□□□□ -2.69
snR40snR40 CLP1Q08685 445 aaPredicted RBP-1.76□□□□□ -2.69
snR40snR40 PIN2Q12057 282 aa-1.76□□□□□ -2.69
snR40snR40 RPS19AP07280 144 aaKnown RBP-1.77□□□□□ -2.69
snR40snR40 RPS19BP07281 144 aaPredicted RBP-1.77□□□□□ -2.69
snR40snR40 EST1P17214 699 aaPredicted RBP-1.77□□□□□ -2.69
snR40snR40 CWH43P25618 953 aa-1.77□□□□□ -2.69
snR40snR40 MRE11P32829 692 aa-1.77□□□□□ -2.69
snR40snR40 MED6P38782 295 aa-1.77□□□□□ -2.69
snR40snR40 CHL4P38907 458 aa-1.77□□□□□ -2.69
snR40snR40 ARB1P40024 610 aaKnown RBP-1.77□□□□□ -2.69
snR40snR40 PFK26P40433 827 aaKnown RBP-1.77□□□□□ -2.69
snR40snR40 YIL059CP40520 121 aa-1.77□□□□□ -2.69
snR40snR40 NCA3P46955 337 aa-1.77□□□□□ -2.69
snR40snR40 POL31P46957 487 aa-1.77□□□□□ -2.69
snR40snR40 YGL088WP53151 121 aa-1.77□□□□□ -2.69
snR40snR40 CAF130P53280 1122 aaPredicted RBP-1.77□□□□□ -2.69
snR40snR40 MTM1P53320 366 aa-1.77□□□□□ -2.69
snR40snR40 SMM1P53720 384 aaKnown RBP-1.77□□□□□ -2.69
snR40snR40 ODC1Q03028 310 aa-1.77□□□□□ -2.69
snR40snR40 YHM2Q04013 314 aa-1.77□□□□□ -2.69
snR40snR40 LIP2Q06005 328 aa-1.77□□□□□ -2.69
snR40snR40 ATG26Q06321 1198 aa-1.77□□□□□ -2.69
snR40snR40 VPS74Q06385 345 aa-1.77□□□□□ -2.69
snR40snR40 COX10P21592 462 aa-1.78□□□□□ -2.69
snR40snR40 GPI18P38211 433 aa-1.78□□□□□ -2.69
snR40snR40 GDH3P39708 457 aa-1.78□□□□□ -2.69
snR40snR40 VID28P40547 921 aa-1.78□□□□□ -2.69
snR40snR40 CTK2P46962 323 aa-1.78□□□□□ -2.69
snR40snR40 GWT1P47026 490 aa-1.78□□□□□ -2.69
snR40snR40 YVH1Q02256 364 aaKnown RBP-1.78□□□□□ -2.69
snR40snR40 RBS1Q05672 457 aaKnown RBP-1.78□□□□□ -2.69
snR40snR40 ADE13Q05911 482 aaKnown RBP-1.78□□□□□ -2.69
snR40snR40 BAG7Q12128 409 aa-1.78□□□□□ -2.69
snR40snR40 SLH1P53327 1967 aaKnown RBP-1.78□□□□□ -2.69
snR40snR40 FRE1P32791 686 aa-1.79□□□□□ -2.7
snR40snR40 ECT1P33412 323 aa-1.79□□□□□ -2.7
snR40snR40 YKR032WP36127 104 aa-1.79□□□□□ -2.7
snR40snR40 MIX23P38162 196 aa-1.79□□□□□ -2.7
snR40snR40 UBA4P38820 440 aa-1.79□□□□□ -2.7
snR40snR40 PSD1P39006 500 aa-1.79□□□□□ -2.7
snR40snR40 SCD6P45978 349 aaKnown RBP RIP-Chip data-1.79□□□□□ -2.7not detected
snR40snR40 UPF3P48412 387 aaKnown RBP-1.79□□□□□ -2.7
snR40snR40 TOF2Q02208 771 aa-1.79□□□□□ -2.7
snR40snR40 MDM12Q92328 271 aa-1.79□□□□□ -2.7
snR40snR40 YSP3P25036 478 aa-1.8□□□□□ -2.7
snR40snR40 POP5P28005 173 aa-1.8□□□□□ -2.7
snR40snR40 ECM25P32525 599 aa-1.8□□□□□ -2.7
snR40snR40 CSE2P33308 149 aa-1.8□□□□□ -2.7
snR40snR40 SKT5P34226 696 aa-1.8□□□□□ -2.7
snR40snR40 RTC2P38279 296 aa-1.8□□□□□ -2.7
snR40snR40 FHL1P39521 936 aa-1.8□□□□□ -2.7
snR40snR40 LSM4P40070 187 aaKnown RBP-1.8□□□□□ -2.7
snR40snR40 RRT5P43607 289 aa-1.8□□□□□ -2.7
snR40snR40 RSC1P53236 928 aa-1.8□□□□□ -2.7
snR40snR40 YGR125WP53273 1036 aa-1.8□□□□□ -2.7
snR40snR40 ALD6P54115 500 aaKnown RBP-1.8□□□□□ -2.7
snR40snR40 RHO4Q00246 291 aa-1.8□□□□□ -2.7
snR40snR40 YDR239CQ03780 787 aa-1.8□□□□□ -2.7
snR40snR40 NDE2Q07500 545 aa-1.8□□□□□ -2.7
snR40snR40 TIR4Q12218 487 aaPredicted RBP-1.8□□□□□ -2.7
snR40snR40 AHC1Q12433 566 aa-1.8□□□□□ -2.7
snR40snR40 RPS23AP0CX29 145 aaKnown RBP-1.81□□□□□ -2.7
snR40snR40 RPS23BP0CX30 145 aa-1.81□□□□□ -2.7
snR40snR40 AAT2P23542 418 aaKnown RBP-1.81□□□□□ -2.7
snR40snR40 PCL2P25693 308 aa-1.81□□□□□ -2.7
snR40snR40 SEC65P29478 273 aa-1.81□□□□□ -2.7
snR40snR40 LHS1P36016 881 aa-1.81□□□□□ -2.7
snR40snR40 AVT4P50944 713 aa-1.81□□□□□ -2.7
snR40snR40 TRS130Q03660 1102 aa-1.81□□□□□ -2.7
snR40snR40 YLR001CQ07895 862 aa-1.81□□□□□ -2.7
snR40snR40 CTI6Q08923 506 aa-1.81□□□□□ -2.7
snR40snR40 FOL3Q12676 427 aaPredicted RBP-1.81□□□□□ -2.7
snR40snR40 TRP1P00912 224 aa-1.82□□□□□ -2.7
snR40snR40 URA3P03962 267 aa-1.82□□□□□ -2.7
snR40snR40 PHO81P17442 1178 aa-1.82□□□□□ -2.7
snR40snR40 DGR2P32330 852 aa-1.82□□□□□ -2.7
snR40snR40 RML2P32611 393 aa-1.82□□□□□ -2.7
snR40snR40 LAG1P38703 411 aa-1.82□□□□□ -2.7
snR40snR40 TRR2P38816 342 aa-1.82□□□□□ -2.7
snR40snR40 COQ5P49017 307 aa-1.82□□□□□ -2.7
snR40snR40 ART5P53244 586 aaKnown RBP-1.82□□□□□ -2.7
snR40snR40 NUP49Q02199 472 aa-1.82□□□□□ -2.7
snR40snR40 CGI121Q03705 181 aaKnown RBP-1.82□□□□□ -2.7
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms