RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C ECM22Q05958 814 aaPredicted RBP3.33□□□□□ -1.88
RPA135YPR010C HDA3Q06623 655 aa3.33□□□□□ -1.88
RPA135YPR010C YPR011CQ12251 326 aa3.33□□□□□ -1.88
RPA135YPR010C AHC1Q12433 566 aa3.33□□□□□ -1.88
RPA135YPR010C APM4Q99186 491 aa3.33□□□□□ -1.88
RPA135YPR010C TUB1P09733 447 aaKnown RBP3.33□□□□□ -1.88
RPA135YPR010C TOP3P13099 656 aa3.33□□□□□ -1.88
RPA135YPR010C SEC2P17065 759 aa3.33□□□□□ -1.88
RPA135YPR010C CLN1P20437 546 aa3.33□□□□□ -1.88
RPA135YPR010C RSC6P25632 483 aa3.33□□□□□ -1.88
RPA135YPR010C BUB2P26448 306 aaPredicted RBP3.33□□□□□ -1.88
RPA135YPR010C UBC8P28263 218 aa3.33□□□□□ -1.88
RPA135YPR010C SBA1P28707 216 aaKnown RBP3.33□□□□□ -1.88
RPA135YPR010C UGP1P32861 499 aaKnown RBP3.33□□□□□ -1.88
RPA135YPR010C IMP3P32899 183 aaPredicted RBP3.33□□□□□ -1.88
RPA135YPR010C MMS21P38632 267 aa3.33□□□□□ -1.88
RPA135YPR010C GIP4P39732 760 aa3.33□□□□□ -1.88
RPA135YPR010C AIM20P40451 204 aa3.33□□□□□ -1.88
RPA135YPR010C YIL001WP40560 513 aa3.33□□□□□ -1.88
RPA135YPR010C IML2P47031 731 aa3.33□□□□□ -1.88
RPA135YPR010C PMT3P47190 753 aa3.33□□□□□ -1.88
RPA135YPR010C COG7P53195 279 aa3.33□□□□□ -1.88
RPA135YPR010C CWC24P53769 259 aa3.33□□□□□ -1.88
RPA135YPR010C HXT15P54854 567 aa3.33□□□□□ -1.88
RPA135YPR010C RPL22BP56628 122 aaKnown RBP3.33□□□□□ -1.88
RPA135YPR010C SNP1Q00916 300 aaPredicted RBP3.33□□□□□ -1.88
RPA135YPR010C DYN3Q04949 312 aa3.33□□□□□ -1.88
RPA135YPR010C ERF2Q06551 359 aa3.33□□□□□ -1.88
RPA135YPR010C SUC2P00724 532 aa3.32□□□□□ -1.88
RPA135YPR010C RER1P25560 188 aa3.32□□□□□ -1.88
RPA135YPR010C YCR090CP25654 182 aaKnown RBP3.32□□□□□ -1.88
RPA135YPR010C LIP5P32875 414 aa3.32□□□□□ -1.88
RPA135YPR010C SPC34P36131 295 aa3.32□□□□□ -1.88
RPA135YPR010C RIM2P38127 377 aa3.32□□□□□ -1.88
RPA135YPR010C PCL5P38794 229 aa3.32□□□□□ -1.88
RPA135YPR010C QRI7P43122 407 aa3.32□□□□□ -1.88
RPA135YPR010C RTT101P47050 842 aa3.32□□□□□ -1.88
RPA135YPR010C PBP1P53297 722 aaKnown RBP3.32□□□□□ -1.88
RPA135YPR010C HST3P53687 447 aa3.32□□□□□ -1.88
RPA135YPR010C NOP15P53927 220 aaPredicted RBP3.32□□□□□ -1.88
RPA135YPR010C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
RPA135YPR010C YPR114WQ06107 315 aa3.32□□□□□ -1.88
RPA135YPR010C TFB4Q12004 338 aa3.32□□□□□ -1.88
RPA135YPR010C GPM3Q12326 303 aa3.32□□□□□ -1.88
RPA135YPR010C ECM29P38737 1868 aa3.32□□□□□ -1.88
RPA135YPR010C TPK2P06245 380 aa3.32□□□□□ -1.88
RPA135YPR010C PGS1P25578 521 aa3.32□□□□□ -1.88
RPA135YPR010C MRPL9P31334 269 aa3.32□□□□□ -1.88
RPA135YPR010C SYN8P31377 255 aa3.32□□□□□ -1.88
RPA135YPR010C SWD1P39706 426 aa3.32□□□□□ -1.88
RPA135YPR010C JEM1P40358 645 aa3.32□□□□□ -1.88
RPA135YPR010C YJL070CP40361 888 aa3.32□□□□□ -1.88
RPA135YPR010C HIS6P40545 261 aa3.32□□□□□ -1.88
RPA135YPR010C ATP22P50273 684 aaPredicted RBP3.32□□□□□ -1.88
RPA135YPR010C ARC35P53731 342 aaKnown RBP3.32□□□□□ -1.88
RPA135YPR010C RPM2Q02773 1202 aa3.32□□□□□ -1.88
RPA135YPR010C YPL034WQ03083 165 aa3.32□□□□□ -1.88
RPA135YPR010C PEX12Q04370 399 aa3.32□□□□□ -1.88
RPA135YPR010C MCH5Q08777 521 aa3.32□□□□□ -1.88
RPA135YPR010C PSY3Q12318 242 aa3.32□□□□□ -1.88
RPA135YPR010C SCM3Q12334 223 aa3.32□□□□□ -1.88
RPA135YPR010C GPR1Q12361 961 aa3.32□□□□□ -1.88
RPA135YPR010C FKS1P38631 1876 aaKnown RBP3.32□□□□□ -1.88
RPA135YPR010C HEM1P09950 548 aaPredicted RBP3.32□□□□□ -1.88
RPA135YPR010C PEX3P28795 441 aa3.32□□□□□ -1.88
RPA135YPR010C SPC29P33419 253 aa3.32□□□□□ -1.88
RPA135YPR010C NIC96P34077 839 aa3.32□□□□□ -1.88
RPA135YPR010C BAP2P38084 609 aa3.32□□□□□ -1.88
RPA135YPR010C SER33P40510 469 aa3.32□□□□□ -1.88
RPA135YPR010C MND2P40577 368 aa3.32□□□□□ -1.88
RPA135YPR010C YJR124CP47159 448 aa3.32□□□□□ -1.88
RPA135YPR010C NUP84P52891 726 aa3.32□□□□□ -1.88
RPA135YPR010C GTR2P53290 341 aa3.32□□□□□ -1.88
RPA135YPR010C PIR3Q03180 325 aa3.32□□□□□ -1.88
RPA135YPR010C YDR444WQ04093 687 aa3.32□□□□□ -1.88
RPA135YPR010C GAD1Q04792 585 aa3.32□□□□□ -1.88
RPA135YPR010C UTP21Q06078 939 aaPredicted RBP3.32□□□□□ -1.88
RPA135YPR010C TSR2Q06672 205 aaKnown RBP3.32□□□□□ -1.88
RPA135YPR010C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
RPA135YPR010C TRM8Q12009 286 aa3.32□□□□□ -1.88
RPA135YPR010C MRH1Q12117 320 aaPredicted RBP3.32□□□□□ -1.88
RPA135YPR010C RPN6Q12377 434 aa3.32□□□□□ -1.88
RPA135YPR010C PRP6P19735 899 aaPredicted RBP3.31□□□□□ -1.88
RPA135YPR010C MF(ALPHA)2P32435 120 aa3.31□□□□□ -1.88
RPA135YPR010C ARC19P33204 171 aaKnown RBP3.31□□□□□ -1.88
RPA135YPR010C CTF13P35203 478 aa3.31□□□□□ -1.88
RPA135YPR010C VPS21P36017 210 aaKnown RBP3.31□□□□□ -1.88
RPA135YPR010C RFS1P38234 210 aaKnown RBP3.31□□□□□ -1.88
RPA135YPR010C TAE1P38340 232 aa3.31□□□□□ -1.88
RPA135YPR010C ELP2P42935 788 aa3.31□□□□□ -1.88
RPA135YPR010C ARC1P46672 376 aaKnown RBP3.31□□□□□ -1.88
RPA135YPR010C DLD2P46681 530 aaKnown RBP3.31□□□□□ -1.88
RPA135YPR010C HSV2P50079 448 aaPredicted RBP3.31□□□□□ -1.88
RPA135YPR010C YPR003CP53394 754 aa3.31□□□□□ -1.88
RPA135YPR010C RSB1Q08417 382 aa3.31□□□□□ -1.88
RPA135YPR010C SLD7Q08457 257 aa3.31□□□□□ -1.88
RPA135YPR010C ATP1P07251 545 aaKnown RBP3.31□□□□□ -1.88
RPA135YPR010C KIN2P13186 1147 aaKnown RBP3.31□□□□□ -1.88
RPA135YPR010C YAK1P14680 807 aa3.31□□□□□ -1.88
RPA135YPR010C UBA1P22515 1024 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms