RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF2	YOR290C	DAL82	P21705	255 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	PBN1	P25580	416 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	GCG1	P32656	232 aa	Known RBP	4.03	□□□□□ -1.76
SNF2	YOR290C	VPS17	P32913	551 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	ZTA1	P38230	334 aa	Known RBP	4.03	□□□□□ -1.76
SNF2	YOR290C	PLB1	P39105	664 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	JEM1	P40358	645 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	YJL132W	P47014	750 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	ASK10	P48361	1146 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	REG1	Q00816	1014 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	NUP53	Q03790	475 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	GRE2	Q12068	342 aa	Known RBP	4.03	□□□□□ -1.76
SNF2	YOR290C	ATE1	P16639	503 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	KGD1	P20967	1014 aa	Known RBP	4.03	□□□□□ -1.76
SNF2	YOR290C	MIH1	P23748	554 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	MEI4	P29467	408 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	THI4	P32318	326 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	PAM1	P37304	830 aa	Known RBP	4.03	□□□□□ -1.76
SNF2	YOR290C	CDS1	P38221	457 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	EFM2	P38347	419 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	TDA3	P38758	523 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	FAR7	P43592	221 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	MET12	P46151	657 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	YHC3	P47040	408 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	MTR3	P48240	250 aa	Predicted RBP	4.03	□□□□□ -1.76
SNF2	YOR290C	PHB2	P50085	310 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	GUP1	P53154	560 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	NUP49	Q02199	472 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	YMR178W	Q03219	274 aa	Known RBP	4.03	□□□□□ -1.76
SNF2	YOR290C	SKY1	Q03656	742 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	ENT5	Q03769	411 aa	Known RBP	4.03	□□□□□ -1.76
SNF2	YOR290C	ATC1	Q04005	294 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	FRQ1	Q06389	190 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	SYT1	Q06836	1226 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	BRE4	Q07660	1125 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	BDS1	Q08347	646 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	YLR108C	Q12259	485 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	NSI1	Q12457	570 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	DRS2	P39524	1355 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	TPI1	P00942	248 aa	Known RBP	4.03	□□□□□ -1.76
SNF2	YOR290C	HIP1	P06775	603 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	YAR066W	P0CX18	203 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	YHR214W	P0CX19	203 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	NSP1	P14907	823 aa	Known RBP	4.03	□□□□□ -1.76
SNF2	YOR290C	VMA1	P17255	1071 aa	Known RBP	4.03	□□□□□ -1.76
SNF2	YOR290C	PRR1	P28708	518 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	SIP1	P32578	815 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	YKL107W	P34251	309 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	AHP1	P38013	176 aa	Known RBP	4.03	□□□□□ -1.76
SNF2	YOR290C	ERG7	P38604	731 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	AFG3	P39925	761 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	MEP1	P40260	492 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	ELO3	P40319	345 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	COS4	P43542	379 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	STE24	P47154	453 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	BRR6	P53062	197 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	YKU80	Q04437	629 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	YDL114W	Q07530	308 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	MED11	Q99278	115 aa		4.03	□□□□□ -1.76
SNF2	YOR290C	BNR1	P40450	1375 aa		4.03	□□□□□ -1.77
SNF2	YOR290C	RPL11A	P0C0W9	174 aa	Known RBP	4.03	□□□□□ -1.77
SNF2	YOR290C	HVG1	P0CE11	249 aa		4.03	□□□□□ -1.77
SNF2	YOR290C	TGL1	P34163	548 aa		4.03	□□□□□ -1.77
SNF2	YOR290C	PTC3	P34221	468 aa	Known RBP	4.03	□□□□□ -1.77
SNF2	YOR290C	YKL222C	P35995	705 aa		4.03	□□□□□ -1.77
SNF2	YOR290C	KDX1	P36005	433 aa		4.03	□□□□□ -1.77
SNF2	YOR290C	MMS4	P38257	691 aa		4.03	□□□□□ -1.77
SNF2	YOR290C	PIH1	P38768	344 aa		4.03	□□□□□ -1.77
SNF2	YOR290C	PAC2	P39937	518 aa		4.03	□□□□□ -1.77
SNF2	YOR290C	VAC8	P39968	578 aa		4.03	□□□□□ -1.77
SNF2	YOR290C	CIN1	P40987	1014 aa		4.03	□□□□□ -1.77
SNF2	YOR290C	AIM25	P47140	327 aa		4.03	□□□□□ -1.77
SNF2	YOR290C	TRM9	P49957	279 aa		4.03	□□□□□ -1.77
SNF2	YOR290C	KXD1	P53158	218 aa		4.03	□□□□□ -1.77
SNF2	YOR290C	SVL3	Q03088	825 aa	Known RBP	4.03	□□□□□ -1.77
SNF2	YOR290C	YPR174C	Q06616	221 aa	Predicted RBP	4.03	□□□□□ -1.77
SNF2	YOR290C	RPL11B	Q3E757	174 aa	Predicted RBP	4.03	□□□□□ -1.77
SNF2	YOR290C	TRP2	P00899	507 aa	Known RBP	4.02	□□□□□ -1.77
SNF2	YOR290C	TRP5	P00931	707 aa	Known RBP	4.02	□□□□□ -1.77
SNF2	YOR290C	TEF1	P02994	458 aa	Known RBP	4.02	□□□□□ -1.77
SNF2	YOR290C	CPA1	P07258	411 aa	Known RBP	4.02	□□□□□ -1.77
SNF2	YOR290C	PFK1	P16861	987 aa	Known RBP	4.02	□□□□□ -1.77
SNF2	YOR290C	ECM1	P39715	212 aa		4.02	□□□□□ -1.77
SNF2	YOR290C	YER121W	P40076	114 aa		4.02	□□□□□ -1.77
SNF2	YOR290C	YGL036W	P53185	909 aa	Predicted RBP	4.02	□□□□□ -1.77
SNF2	YOR290C	PDR16	P53860	351 aa	Known RBP	4.02	□□□□□ -1.77
SNF2	YOR290C	OSH6	Q02201	448 aa		4.02	□□□□□ -1.77
SNF2	YOR290C	YLR036C	Q07986	203 aa		4.02	□□□□□ -1.77
SNF2	YOR290C	THP3	Q12049	470 aa	Known RBP	4.02	□□□□□ -1.77
SNF2	YOR290C	ERV2	Q12284	196 aa		4.02	□□□□□ -1.77
SNF2	YOR290C	CMC2	Q3E7A4	109 aa		4.02	□□□□□ -1.77
SNF2	YOR290C	YPT6	Q99260	215 aa		4.02	□□□□□ -1.77
SNF2	YOR290C	RHO2	P06781	192 aa		4.02	□□□□□ -1.77
SNF2	YOR290C	ADE5,7	P07244	802 aa	Known RBP	4.02	□□□□□ -1.77
SNF2	YOR290C	SAM1	P10659	382 aa	Known RBP	4.02	□□□□□ -1.77
SNF2	YOR290C	CNB1	P25296	175 aa		4.02	□□□□□ -1.77
SNF2	YOR290C	KIN82	P25341	720 aa		4.02	□□□□□ -1.77
SNF2	YOR290C	RRP7	P25368	297 aa	Predicted RBP	4.02	□□□□□ -1.77
SNF2	YOR290C	PUT3	P25502	979 aa	Predicted RBP	4.02	□□□□□ -1.77
SNF2	YOR290C	KRE6	P32486	720 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms