RNA–Protein interactions for RNA: YOR066W

MSA1, Transcript of Activator of G1-specific transcription factors MBF and SBF, yeast

Gene MSA1, Length 1,890 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSA1	YOR066W	UBA4	P38820	440 aa		4.13	□□□□□ -1.75
MSA1	YOR066W	ZIM17	P42844	174 aa		4.13	□□□□□ -1.75
MSA1	YOR066W	PYK2	P52489	506 aa	Known RBP	4.13	□□□□□ -1.75
MSA1	YOR066W	MNP1	P53163	194 aa	Predicted RBP	4.13	□□□□□ -1.75
MSA1	YOR066W	CAF130	P53280	1122 aa	Predicted RBP	4.13	□□□□□ -1.75
MSA1	YOR066W	AIM32	Q04689	311 aa		4.13	□□□□□ -1.75
MSA1	YOR066W	FRE7	Q12333	620 aa		4.13	□□□□□ -1.75
MSA1	YOR066W	HOM2	P13663	365 aa	Known RBP	4.13	□□□□□ -1.75
MSA1	YOR066W	SUI2	P20459	304 aa	Known RBP	4.13	□□□□□ -1.75
MSA1	YOR066W	CNA1	P23287	553 aa		4.13	□□□□□ -1.75
MSA1	YOR066W	ECM32	P32644	1121 aa	Known RBP	4.13	□□□□□ -1.75
MSA1	YOR066W	JEM1	P40358	645 aa		4.13	□□□□□ -1.75
MSA1	YOR066W	YIL060W	P40519	144 aa		4.13	□□□□□ -1.75
MSA1	YOR066W	YGR126W	P53274	230 aa		4.13	□□□□□ -1.75
MSA1	YOR066W	IDP3	P53982	420 aa	Known RBP	4.13	□□□□□ -1.75
MSA1	YOR066W	YDL057W	Q07379	328 aa		4.13	□□□□□ -1.75
MSA1	YOR066W	RRI1	Q12468	440 aa		4.13	□□□□□ -1.75
MSA1	YOR066W	RPL31B	P0C2H9	113 aa	Known RBP	4.12	□□□□□ -1.75
MSA1	YOR066W	YMR085W	P0CF18	432 aa		4.12	□□□□□ -1.75
MSA1	YOR066W	SNF3	P10870	884 aa		4.12	□□□□□ -1.75
MSA1	YOR066W	APE4	P38821	490 aa		4.12	□□□□□ -1.75
MSA1	YOR066W	YNL144C	P53907	740 aa		4.12	□□□□□ -1.75
MSA1	YOR066W	KAP120	Q02932	1032 aa		4.12	□□□□□ -1.75
MSA1	YOR066W	TAP42	Q04372	366 aa		4.12	□□□□□ -1.75
MSA1	YOR066W	ARP10	Q04549	284 aa		4.12	□□□□□ -1.75
MSA1	YOR066W	SOV1	Q04748	898 aa		4.12	□□□□□ -1.75
MSA1	YOR066W	NCE102	Q12207	173 aa	RIP-Chip data	4.12	□□□□□ -1.75	not detected
MSA1	YOR066W	GAL4	P04386	881 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	PRP2	P20095	876 aa	Predicted RBP	4.11	□□□□□ -1.75
MSA1	YOR066W	MNE1	P24720	663 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	STV1	P37296	890 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	ULP2	P40537	1034 aa	Predicted RBP	4.11	□□□□□ -1.75
MSA1	YOR066W	HXT9	P40885	567 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	SNO3	P43544	222 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	RSC9	Q03124	581 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	TCB3	Q03640	1545 aa	Known RBP	4.11	□□□□□ -1.75
MSA1	YOR066W	CBP1	P07252	654 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
MSA1	YOR066W	RPB8	P20436	146 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	CPR2	P23285	205 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	MBR1	P23493	339 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	RML2	P32611	393 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	TFB1	P32776	642 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	ROT2	P38138	954 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
MSA1	YOR066W	ALK1	P43633	760 aa	Known RBP	4.11	□□□□□ -1.75
MSA1	YOR066W	AIM22	P47051	409 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	DON1	Q05610	365 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	FMP45	Q07651	309 aa		4.11	□□□□□ -1.75
MSA1	YOR066W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	RIP-Chip
MSA1	YOR066W	PPH22	P23595	377 aa		4.1	□□□□□ -1.75
MSA1	YOR066W	SNT1	P25357	1226 aa		4.1	□□□□□ -1.75
MSA1	YOR066W	ERV1	P27882	189 aa		4.1	□□□□□ -1.75
MSA1	YOR066W	YME2	P32843	850 aa		4.1	□□□□□ -1.75
MSA1	YOR066W	TUL1	P36096	758 aa		4.1	□□□□□ -1.75
MSA1	YOR066W	MBB1	P39534	108 aa		4.1	□□□□□ -1.75
MSA1	YOR066W	VMA13	P41807	478 aa	Known RBP	4.1	□□□□□ -1.75
MSA1	YOR066W	CAK1	P43568	368 aa	Predicted RBP	4.1	□□□□□ -1.75
MSA1	YOR066W	DUG3	P53871	357 aa		4.1	□□□□□ -1.75
MSA1	YOR066W	YMR160W	Q03823	816 aa		4.1	□□□□□ -1.75
MSA1	YOR066W	PDH1	Q12428	516 aa	Known RBP	4.1	□□□□□ -1.75
MSA1	YOR066W	COR1	P07256	457 aa		4.09	□□□□□ -1.75
MSA1	YOR066W	PEP4	P07267	405 aa	Known RBP	4.09	□□□□□ -1.75
MSA1	YOR066W	SPB1	P25582	841 aa	Predicted RBP	4.09	□□□□□ -1.75
MSA1	YOR066W	VPH1	P32563	840 aa	Known RBP	4.09	□□□□□ -1.75
MSA1	YOR066W	MDL1	P33310	695 aa		4.09	□□□□□ -1.75
MSA1	YOR066W	YKL023W	P36103	277 aa	Known RBP	4.09	□□□□□ -1.75
MSA1	YOR066W	SNG1	P46950	547 aa		4.09	□□□□□ -1.75
MSA1	YOR066W	ATG27	P46989	271 aa		4.09	□□□□□ -1.75
MSA1	YOR066W	NET1	P47035	1189 aa		4.09	□□□□□ -1.75
MSA1	YOR066W	VPS25	P47142	202 aa		4.09	□□□□□ -1.75
MSA1	YOR066W	TCB2	P48231	1178 aa		4.09	□□□□□ -1.75
MSA1	YOR066W	PKP2	P53170	491 aa		4.09	□□□□□ -1.75
MSA1	YOR066W	YVH1	Q02256	364 aa	Known RBP	4.09	□□□□□ -1.75
MSA1	YOR066W	VTC3	Q02725	835 aa		4.09	□□□□□ -1.75
MSA1	YOR066W	OAZ1	Q02803	292 aa		4.09	□□□□□ -1.75
MSA1	YOR066W	CAC2	Q04199	468 aa		4.09	□□□□□ -1.75
MSA1	YOR066W	GYL1	Q04322	720 aa		4.09	□□□□□ -1.75
MSA1	YOR066W	MCP2	Q06567	569 aa		4.09	□□□□□ -1.75
MSA1	YOR066W	YDL218W	Q07629	317 aa		4.09	□□□□□ -1.75
MSA1	YOR066W	IDH2	P28241	369 aa	Known RBP	4.09	□□□□□ -1.76
MSA1	YOR066W	SHP1	P34223	423 aa		4.09	□□□□□ -1.76
MSA1	YOR066W	YHR210C	P38893	341 aa		4.09	□□□□□ -1.76
MSA1	YOR066W	COP1	P53622	1201 aa	Known RBP	4.09	□□□□□ -1.76
MSA1	YOR066W	HEF3	P53978	1044 aa	Known RBP	4.09	□□□□□ -1.76
MSA1	YOR066W	SHR3	Q02774	210 aa		4.09	□□□□□ -1.76
MSA1	YOR066W	CTL1	Q03220	320 aa	Known RBP	4.09	□□□□□ -1.76
MSA1	YOR066W	POS5	Q06892	414 aa		4.09	□□□□□ -1.76
MSA1	YOR066W	THP1	Q08231	455 aa		4.09	□□□□□ -1.76
MSA1	YOR066W	PAR32	Q12515	295 aa	Known RBP	4.09	□□□□□ -1.76
MSA1	YOR066W	PGK1	P00560	416 aa	Known RBP	4.08	□□□□□ -1.76
MSA1	YOR066W	RAD14	P28519	371 aa		4.08	□□□□□ -1.76
MSA1	YOR066W	LEU5	P38702	357 aa		4.08	□□□□□ -1.76
MSA1	YOR066W	PHO90	P39535	881 aa		4.08	□□□□□ -1.76
MSA1	YOR066W	GDI1	P39958	451 aa	Known RBP	4.08	□□□□□ -1.76
MSA1	YOR066W	VRG4	P40107	337 aa		4.08	□□□□□ -1.76
MSA1	YOR066W	CFD1	P40558	293 aa		4.08	□□□□□ -1.76
MSA1	YOR066W	LCB2	P40970	561 aa		4.08	□□□□□ -1.76
MSA1	YOR066W	YGL108C	P53139	140 aa		4.08	□□□□□ -1.76
MSA1	YOR066W	SMM1	P53720	384 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms