RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	PPG1	P32838	368 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	UTP11	P34247	250 aa	Predicted RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	TSA1	P34760	196 aa	Known RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	YKR078W	P36158	585 aa	Known RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	VRP1	P37370	817 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	CDC27	P38042	758 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	POA1	P38218	177 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	YHL041W	P38730	149 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	MUP3	P38734	546 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	UTP9	P38882	575 aa	Known RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	VAC8	P39968	578 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	RGI2	P40188	164 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	PAN6	P40459	309 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	RPA14	P50106	137 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	BOL2	P53082	120 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	PEX8	P53248	589 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	FYV6	P53913	173 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	VAC7	P53950	1165 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	YNL018C	P53976	612 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	GOT1	Q03554	138 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	ATG17	Q06410	417 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	YLR352W	Q06479	807 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	LOT6	Q07923	191 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
SSB2	YNL209W	TRM8	Q12009	286 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	YPQ1	Q12010	308 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	HUA2	Q12134	243 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	ATP2	P00830	511 aa	Known RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	ADE8	P04161	214 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	NCP1	P16603	691 aa	Known RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	AAT2	P23542	418 aa	Known RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	AEP1	P32493	518 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	IMP3	P32899	183 aa	Predicted RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	MTC2	P34246	357 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	AMN1	P38285	549 aa	Predicted RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	ARP1	P38696	384 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	EFM1	P38732	585 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	ACO2	P39533	789 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	HAT2	P39984	401 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	NOP16	P40007	231 aa	Known RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	SCS2	P40075	244 aa	Known RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	COA1	P40452	197 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	UBP7	P40453	1071 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	QDR2	P40474	542 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	AGE2	P40529	298 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	GVP36	P40531	326 aa	Known RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	IST3	P40565	148 aa	Predicted RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	DIM1	P41819	318 aa	Known RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	ATP22	P50273	684 aa	Predicted RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	NMA2	P53204	395 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	ALG12	P53730	551 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	NAN1	Q02931	896 aa	Known RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	YDR132C	Q03900	495 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	RRP17	Q04031	235 aa	Predicted RBP	4.6	□□□□□ -1.67
SSB2	YNL209W	YDR109C	Q04585	715 aa		4.6	□□□□□ -1.67
SSB2	YNL209W	YLR422W	Q06409	1932 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	REP1	P03871	373 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	STE3	P06783	470 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	GUK1	P15454	187 aa	Known RBP	4.59	□□□□□ -1.67
SSB2	YNL209W	YCK2	P23292	546 aa	Known RBP	4.59	□□□□□ -1.67
SSB2	YNL209W	SGF29	P25554	259 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	MRPL9	P31334	269 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	SKT5	P34226	696 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	ALY1	P36117	915 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	SLM4	P38247	162 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	TDP1	P38319	544 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	GND1	P38720	489 aa	Known RBP	4.59	□□□□□ -1.67
SSB2	YNL209W	ARN1	P38731	627 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	DSS1	P39112	969 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	ALG8	P40351	577 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	CCT7	P42943	550 aa	Known RBP	4.59	□□□□□ -1.67
SSB2	YNL209W	RMD8	P43620	662 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	ARH1	P48360	493 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	MRX6	P48564	524 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	NOP19	P53317	196 aa	Predicted RBP	4.59	□□□□□ -1.67
SSB2	YNL209W	IBD2	P53892	351 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	ASI2	P53895	289 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	EFM6	P53970	246 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	YKR005C	Q02203	525 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	GAS3	Q03655	524 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	BLS1	Q06071	122 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	BSP1	Q06604	576 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	ECM30	Q06673	1274 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	SGT1	Q08446	395 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	MCH5	Q08777	521 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	YLR049C	Q12110	428 aa		4.59	□□□□□ -1.67
SSB2	YNL209W	CMR1	Q12510	522 aa	Known RBP	4.59	□□□□□ -1.67
SSB2	YNL209W	HSH49	Q99181	213 aa	Predicted RBP	4.59	□□□□□ -1.67
SSB2	YNL209W	SBP1	P10080	294 aa	Known RBP	4.58	□□□□□ -1.68
SSB2	YNL209W	SCH9	P11792	824 aa	Known RBP	4.58	□□□□□ -1.68
SSB2	YNL209W	THR1	P17423	357 aa	Known RBP	4.58	□□□□□ -1.68
SSB2	YNL209W	ARF2	P19146	181 aa	Known RBP	4.58	□□□□□ -1.68
SSB2	YNL209W	TYR1	P20049	452 aa		4.58	□□□□□ -1.68
SSB2	YNL209W	CCA1	P21269	546 aa		4.58	□□□□□ -1.68
SSB2	YNL209W	BUB2	P26448	306 aa	Predicted RBP	4.58	□□□□□ -1.68
SSB2	YNL209W	NGG1	P32494	702 aa		4.58	□□□□□ -1.68
SSB2	YNL209W	RPT5	P33297	434 aa	Known RBP	4.58	□□□□□ -1.68
SSB2	YNL209W	SCD5	P34758	872 aa		4.58	□□□□□ -1.68
SSB2	YNL209W	POP2	P39008	433 aa		4.58	□□□□□ -1.68
SSB2	YNL209W	NPT1	P39683	429 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms