RNA–Protein interactions for RNA: YNL044W

YIP3, Transcript of Protein localized to COPII vesicles, yeastyeast

Gene YIP3, Length 531 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIP3YNL044W YCK1P23291 538 aa4.3□□□□□ -1.72
YIP3YNL044W POL4P25615 582 aa4.3□□□□□ -1.72
YIP3YNL044W MCM10P32354 571 aa4.3□□□□□ -1.72
YIP3YNL044W SSE2P32590 693 aaKnown RBP4.3□□□□□ -1.72
YIP3YNL044W YKL023WP36103 277 aaKnown RBP4.3□□□□□ -1.72
YIP3YNL044W RPL32P38061 130 aaKnown RBP4.3□□□□□ -1.72
YIP3YNL044W YEL068CP39977 110 aa4.3□□□□□ -1.72
YIP3YNL044W ROK1P45818 564 aaPredicted RBP4.3□□□□□ -1.72
YIP3YNL044W SHR3Q02774 210 aa4.3□□□□□ -1.72
YIP3YNL044W MSC1Q03104 513 aa4.3□□□□□ -1.72
YIP3YNL044W SPE4Q12455 300 aa4.3□□□□□ -1.72
YIP3YNL044W RPL15AP05748 204 aaKnown RBP4.29□□□□□ -1.72
YIP3YNL044W PEP5P12868 1029 aa4.29□□□□□ -1.72
YIP3YNL044W MTF1P14908 341 aaKnown RBP4.29□□□□□ -1.72
YIP3YNL044W SUI2P20459 304 aaKnown RBP4.29□□□□□ -1.72
YIP3YNL044W SGV1P23293 657 aaKnown RBP4.29□□□□□ -1.72
YIP3YNL044W SGF29P25554 259 aa4.29□□□□□ -1.72
YIP3YNL044W BUD14P27637 709 aa4.29□□□□□ -1.72
YIP3YNL044W NDC1P32500 655 aa4.29□□□□□ -1.72
YIP3YNL044W PTR2P32901 601 aa4.29□□□□□ -1.72
YIP3YNL044W LOS1P33418 1100 aaPredicted RBP4.29□□□□□ -1.72
YIP3YNL044W SIP2P34164 415 aaKnown RBP4.29□□□□□ -1.72
YIP3YNL044W YBR144CP34215 104 aa4.29□□□□□ -1.72
YIP3YNL044W CSM2P40465 213 aa4.29□□□□□ -1.72
YIP3YNL044W RTT101P47050 842 aa4.29□□□□□ -1.72
YIP3YNL044W YGR126WP53274 230 aa4.29□□□□□ -1.72
YIP3YNL044W YKU80Q04437 629 aa4.29□□□□□ -1.72
YIP3YNL044W FMP40Q08968 688 aaPredicted RBP4.29□□□□□ -1.72
YIP3YNL044W YBR126W-AQ8TGU7 68 aa4.29□□□□□ -1.72
YIP3YNL044W CPR3P25719 182 aa4.28□□□□□ -1.72
YIP3YNL044W CIN4P39110 191 aa4.28□□□□□ -1.72
YIP3YNL044W ALT2P52892 507 aa4.28□□□□□ -1.72
YIP3YNL044W LCL3P53153 274 aa4.28□□□□□ -1.72
YIP3YNL044W BUD32P53323 261 aa4.28□□□□□ -1.72
YIP3YNL044W HUA2Q12134 243 aa4.28□□□□□ -1.72
YIP3YNL044W SET6Q12529 373 aa4.28□□□□□ -1.72
YIP3YNL044W APE1P14904 514 aa4.27□□□□□ -1.73
YIP3YNL044W UBP11P36026 717 aa4.27□□□□□ -1.73
YIP3YNL044W MUD2P36084 527 aaKnown RBP4.27□□□□□ -1.73
YIP3YNL044W OSH3P38713 996 aaKnown RBP4.27□□□□□ -1.73
YIP3YNL044W YHR218WP38899 603 aa4.27□□□□□ -1.73
YIP3YNL044W VPS52P39904 641 aa4.27□□□□□ -1.73
YIP3YNL044W RPH1P39956 796 aa4.27□□□□□ -1.73
YIP3YNL044W YJL213WP40896 331 aa4.27□□□□□ -1.73
YIP3YNL044W YDL186WP48568 277 aa4.27□□□□□ -1.73
YIP3YNL044W DSD1P53095 428 aa4.27□□□□□ -1.73
YIP3YNL044W DUO1P53168 247 aaKnown RBP4.27□□□□□ -1.73
YIP3YNL044W ERP1Q05359 219 aaKnown RBP4.27□□□□□ -1.73
YIP3YNL044W YDL057WQ07379 328 aa4.27□□□□□ -1.73
YIP3YNL044W NOP58Q12499 511 aaKnown RBP4.27□□□□□ -1.73
YIP3YNL044W GDH1P07262 454 aaKnown RBP4.26□□□□□ -1.73
YIP3YNL044W ATS1P31386 333 aa4.26□□□□□ -1.73
YIP3YNL044W RPR2P40571 144 aa4.26□□□□□ -1.73
YIP3YNL044W YFR016CP43597 1233 aaKnown RBP4.26□□□□□ -1.73
YIP3YNL044W NCE102Q12207 173 aaRIP-Chip data4.26□□□□□ -1.73not detected
YIP3YNL044W CAR1P00812 333 aaKnown RBP4.25□□□□□ -1.73
YIP3YNL044W SPC110P32380 944 aa4.25□□□□□ -1.73
YIP3YNL044W SGS1P35187 1447 aa4.25□□□□□ -1.73
YIP3YNL044W YHR210CP38893 341 aa4.25□□□□□ -1.73
YIP3YNL044W YJR154WP47181 346 aa4.25□□□□□ -1.73
YIP3YNL044W NGL3Q03210 505 aa4.25□□□□□ -1.73
YIP3YNL044W AMD1P15274 810 aaKnown RBP4.24□□□□□ -1.73
YIP3YNL044W AGA1P32323 725 aa4.24□□□□□ -1.73
YIP3YNL044W SAC6P32599 642 aaKnown RBP4.24□□□□□ -1.73
YIP3YNL044W CCT6P39079 546 aa4.24□□□□□ -1.73
YIP3YNL044W COS10P52924 374 aa4.24□□□□□ -1.73
YIP3YNL044W RLI1Q03195 608 aaKnown RBP4.24□□□□□ -1.73
YIP3YNL044W YOR365CQ08844 703 aa4.24□□□□□ -1.73
YIP3YNL044W MRP13P12686 339 aa4.23□□□□□ -1.73
YIP3YNL044W EST1P17214 699 aaPredicted RBP4.23□□□□□ -1.73
YIP3YNL044W ART10P18634 518 aaKnown RBP4.23□□□□□ -1.73
YIP3YNL044W MCK1P21965 375 aaKnown RBP4.23□□□□□ -1.73
YIP3YNL044W PAH1P32567 862 aa4.23□□□□□ -1.73
YIP3YNL044W TIF3P34167 436 aaKnown RBP4.23□□□□□ -1.73
YIP3YNL044W MTC4P38335 694 aaKnown RBP4.23□□□□□ -1.73
YIP3YNL044W SCD6P45978 349 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73 RIP-Chip
YIP3YNL044W DRN1P53255 507 aaKnown RBP4.23□□□□□ -1.73
YIP3YNL044W SYO1Q07395 620 aa4.23□□□□□ -1.73
YIP3YNL044W YDL009CQ12210 107 aa4.23□□□□□ -1.73
YIP3YNL044W AYT1Q12226 474 aa4.23□□□□□ -1.73
YIP3YNL044W RPL20AP0CX23 172 aaKnown RBP4.22□□□□□ -1.73
YIP3YNL044W RPL20BP0CX24 172 aaPredicted RBP4.22□□□□□ -1.73
YIP3YNL044W SEF1P34228 1148 aa4.22□□□□□ -1.73
YIP3YNL044W YBR139WP38109 508 aa4.22□□□□□ -1.73
YIP3YNL044W FLC2P39719 783 aa4.22□□□□□ -1.73
YIP3YNL044W ALG5P40350 334 aa4.22□□□□□ -1.73
YIP3YNL044W VID30P53076 958 aa4.22□□□□□ -1.73
YIP3YNL044W IPI3P53877 555 aa4.22□□□□□ -1.73
YIP3YNL044W SLD5Q03406 294 aa4.22□□□□□ -1.73
YIP3YNL044W BNA5Q05979 453 aa4.22□□□□□ -1.73
YIP3YNL044W YEH1Q07804 573 aa4.22□□□□□ -1.73
YIP3YNL044W NMD4Q12129 218 aa4.22□□□□□ -1.73
YIP3YNL044W HSH49Q99181 213 aaPredicted RBP4.22□□□□□ -1.73
YIP3YNL044W YPT6Q99260 215 aa4.22□□□□□ -1.73
YIP3YNL044W RAD52P06778 471 aaKnown RBP4.21□□□□□ -1.74
YIP3YNL044W PEP4P07267 405 aaKnown RBP4.21□□□□□ -1.74
YIP3YNL044W SEC53P07283 254 aaKnown RBP4.21□□□□□ -1.74
YIP3YNL044W YCR007CP25354 239 aa4.21□□□□□ -1.74
YIP3YNL044W FRE1P32791 686 aa4.21□□□□□ -1.74
YIP3YNL044W NPR2P39923 615 aa4.21□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms