RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W HEM14P40012 539 aa2.41□□□□□ -2.02
UBP15YMR304W FYV10P40492 516 aa2.41□□□□□ -2.02
UBP15YMR304W NOP9P47077 666 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W YPT11P48559 417 aa2.41□□□□□ -2.02
UBP15YMR304W UTP8P53276 713 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W GFD1Q04839 188 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W PNP1Q05788 311 aa2.41□□□□□ -2.02
UBP15YMR304W MSC3Q05812 728 aa2.41□□□□□ -2.02
UBP15YMR304W COQ10Q08058 207 aa2.41□□□□□ -2.02
UBP15YMR304W LYS21Q12122 440 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W HSH49Q99181 213 aaPredicted RBP2.41□□□□□ -2.02
UBP15YMR304W RAD61Q99359 647 aa2.41□□□□□ -2.02
UBP15YMR304W NFT1P0CE68 1218 aa2.41□□□□□ -2.02
UBP15YMR304W CDC23P16522 626 aa2.41□□□□□ -2.02
UBP15YMR304W DBP5P20449 482 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W ACE2P21192 770 aa2.41□□□□□ -2.02
UBP15YMR304W DBR1P24309 405 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W YPT7P32939 208 aa2.41□□□□□ -2.02
UBP15YMR304W FTH1P38310 465 aa2.41□□□□□ -2.02
UBP15YMR304W SRP72P38688 640 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W RRP4P38792 359 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W OAF1P39720 1047 aaPredicted RBP2.41□□□□□ -2.02
UBP15YMR304W DPH1P40487 425 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W AIP1P46680 615 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W PPT1P53043 513 aa2.41□□□□□ -2.02
UBP15YMR304W CGR1P53188 120 aa2.41□□□□□ -2.02
UBP15YMR304W NRD1P53617 575 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
UBP15YMR304W YML131WQ03102 365 aa2.41□□□□□ -2.02
UBP15YMR304W GIS4Q04233 774 aa2.41□□□□□ -2.02
UBP15YMR304W CDA2Q06703 312 aa2.41□□□□□ -2.02
UBP15YMR304W MED2Q12124 431 aa2.41□□□□□ -2.02
UBP15YMR304W YOR214CQ12282 236 aa2.41□□□□□ -2.02
UBP15YMR304W NCA2Q12374 616 aa2.41□□□□□ -2.02
UBP15YMR304W PDH1Q12428 516 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W BI2P03873 423 aa2.41□□□□□ -2.02
UBP15YMR304W MET6P05694 767 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W SIR3P06701 978 aa2.41□□□□□ -2.02
UBP15YMR304W PRE8P23639 250 aa2.41□□□□□ -2.02
UBP15YMR304W NPP1P25353 742 aa2.41□□□□□ -2.02
UBP15YMR304W ADH7P25377 361 aa2.41□□□□□ -2.02
UBP15YMR304W UTR4P32626 227 aa2.41□□□□□ -2.02
UBP15YMR304W WBP1P33767 430 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W MCR1P36060 302 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W CAF4P36130 643 aa2.41□□□□□ -2.02
UBP15YMR304W YMR262WP38430 313 aa2.41□□□□□ -2.02
UBP15YMR304W DED81P38707 554 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W QNS1P38795 714 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W CCT4P39078 528 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W IES5P40060 125 aa2.41□□□□□ -2.02
UBP15YMR304W UBX6P47049 396 aa2.41□□□□□ -2.02
UBP15YMR304W YJR120WP47157 116 aa2.41□□□□□ -2.02
UBP15YMR304W NMA2P53204 395 aa2.41□□□□□ -2.02
UBP15YMR304W MRPL50P53724 139 aa2.41□□□□□ -2.02
UBP15YMR304W MTD1Q02046 320 aaKnown RBP2.41□□□□□ -2.02
UBP15YMR304W NHP10Q03435 203 aa2.41□□□□□ -2.02
UBP15YMR304W WAR1Q03631 944 aa2.41□□□□□ -2.02
UBP15YMR304W COA4Q05809 96 aa2.41□□□□□ -2.02
UBP15YMR304W SMC5Q08204 1093 aa2.41□□□□□ -2.02
UBP15YMR304W SKI7Q08491 747 aaPredicted RBP2.41□□□□□ -2.02
UBP15YMR304W APL4Q12028 832 aa2.41□□□□□ -2.02
UBP15YMR304W SEY1Q99287 776 aa2.41□□□□□ -2.02
UBP15YMR304W MRP10O75012 95 aa2.4□□□□□ -2.02
UBP15YMR304W STE3P06783 470 aa2.4□□□□□ -2.02
UBP15YMR304W YER190C-BP0CX94 160 aa2.4□□□□□ -2.02
UBP15YMR304W YEL077W-AP0CX95 160 aa2.4□□□□□ -2.02
UBP15YMR304W YGR296C-BP0CX96 160 aa2.4□□□□□ -2.02
UBP15YMR304W YPL283W-BP0CX97 160 aa2.4□□□□□ -2.02
UBP15YMR304W YPR204C-AP0CX98 160 aa2.4□□□□□ -2.02
UBP15YMR304W REV1P12689 985 aa2.4□□□□□ -2.02
UBP15YMR304W RPL3P14126 387 aaKnown RBP2.4□□□□□ -2.02
UBP15YMR304W YCK1P23291 538 aa2.4□□□□□ -2.02
UBP15YMR304W YSR3P23501 404 aa2.4□□□□□ -2.02
UBP15YMR304W DPB2P24482 689 aaPredicted RBP2.4□□□□□ -2.02
UBP15YMR304W VAM7P32912 316 aa2.4□□□□□ -2.02
UBP15YMR304W ECM8P38246 354 aa2.4□□□□□ -2.02
UBP15YMR304W PRP24P49960 444 aaKnown RBP2.4□□□□□ -2.02
UBP15YMR304W COG1P53079 417 aa2.4□□□□□ -2.02
UBP15YMR304W ALG12P53730 551 aa2.4□□□□□ -2.02
UBP15YMR304W ALO1P54783 526 aaKnown RBP2.4□□□□□ -2.02
UBP15YMR304W ROD1Q02805 837 aa2.4□□□□□ -2.02
UBP15YMR304W RQC1Q05468 723 aaKnown RBP2.4□□□□□ -2.02
UBP15YMR304W GCN4P03069 281 aa2.4□□□□□ -2.03
UBP15YMR304W CPR1P14832 162 aaKnown RBP2.4□□□□□ -2.03
UBP15YMR304W STI1P15705 589 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
UBP15YMR304W MRPL8P22353 238 aa2.4□□□□□ -2.03
UBP15YMR304W AAT2P23542 418 aaKnown RBP2.4□□□□□ -2.03
UBP15YMR304W YSP3P25036 478 aa2.4□□□□□ -2.03
UBP15YMR304W CDC15P27636 974 aa2.4□□□□□ -2.03
UBP15YMR304W LAC1P28496 418 aa2.4□□□□□ -2.03
UBP15YMR304W PMT2P31382 759 aa2.4□□□□□ -2.03
UBP15YMR304W THI4P32318 326 aa2.4□□□□□ -2.03
UBP15YMR304W PMT1P33775 817 aa2.4□□□□□ -2.03
UBP15YMR304W DUG2P38149 878 aa2.4□□□□□ -2.03
UBP15YMR304W EXO1P39875 702 aa2.4□□□□□ -2.03
UBP15YMR304W YAT2P40017 923 aa2.4□□□□□ -2.03
UBP15YMR304W QRI1P43123 477 aaKnown RBP2.4□□□□□ -2.03
UBP15YMR304W YFR018CP43599 363 aa2.4□□□□□ -2.03
UBP15YMR304W AIM23P47015 356 aa2.4□□□□□ -2.03
UBP15YMR304W COS12P53053 380 aa2.4□□□□□ -2.03
UBP15YMR304W SOK2P53438 785 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms