RNA–Protein interactions for RNA: YML118W

NGL3, Transcript of 3'-5' exonuclease specific for poly-A RNAs, yeast

Gene NGL3, Length 1,518 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NGL3	YML118W	SIL1	Q08199	421 aa		4.39	□□□□□ -1.71
NGL3	YML118W	AIM39	Q08223	395 aa		4.39	□□□□□ -1.71
NGL3	YML118W	YOL159C	Q08300	171 aa		4.39	□□□□□ -1.71
NGL3	YML118W	PCL8	Q08966	492 aa		4.39	□□□□□ -1.71
NGL3	YML118W	NTO1	Q12311	748 aa		4.39	□□□□□ -1.71
NGL3	YML118W	YLR358C	O13565	187 aa		4.38	□□□□□ -1.71
NGL3	YML118W	ILV2	P07342	687 aa	Known RBP	4.38	□□□□□ -1.71
NGL3	YML118W	RPL31B	P0C2H9	113 aa	Known RBP	4.38	□□□□□ -1.71
NGL3	YML118W	GAS1	P22146	559 aa	Known RBP	4.38	□□□□□ -1.71
NGL3	YML118W	HRR25	P29295	494 aa	Known RBP	4.38	□□□□□ -1.71
NGL3	YML118W	GDT1	P38301	280 aa	Predicted RBP	4.38	□□□□□ -1.71
NGL3	YML118W	CBR1	P38626	284 aa	Known RBP	4.38	□□□□□ -1.71
NGL3	YML118W	RTT105	P40063	208 aa		4.38	□□□□□ -1.71
NGL3	YML118W	OSW5	P40219	148 aa		4.38	□□□□□ -1.71
NGL3	YML118W	YJL132W	P47014	750 aa		4.38	□□□□□ -1.71
NGL3	YML118W	COS5	P47187	383 aa		4.38	□□□□□ -1.71
NGL3	YML118W	SHE4	P51534	789 aa		4.38	□□□□□ -1.71
NGL3	YML118W	PDR16	P53860	351 aa	Known RBP	4.38	□□□□□ -1.71
NGL3	YML118W	PRO2	P54885	456 aa	Known RBP	4.38	□□□□□ -1.71
NGL3	YML118W	SMX3	P54999	86 aa	Predicted RBP	4.38	□□□□□ -1.71
NGL3	YML118W	HRD3	Q05787	833 aa		4.38	□□□□□ -1.71
NGL3	YML118W	COS7	Q07788	383 aa		4.38	□□□□□ -1.71
NGL3	YML118W	TEN1	Q07921	160 aa		4.38	□□□□□ -1.71
NGL3	YML118W	YLR040C	Q07988	224 aa		4.38	□□□□□ -1.71
NGL3	YML118W	ETT1	Q08421	412 aa	Known RBP	4.38	□□□□□ -1.71
NGL3	YML118W	IKI3	Q06706	1349 aa	Known RBP	4.38	□□□□□ -1.71
NGL3	YML118W	SPO7	P18410	259 aa		4.37	□□□□□ -1.71
NGL3	YML118W	URA4	P20051	364 aa		4.37	□□□□□ -1.71
NGL3	YML118W	ELO2	P25358	347 aa		4.37	□□□□□ -1.71
NGL3	YML118W	PTC6	P25646	442 aa		4.37	□□□□□ -1.71
NGL3	YML118W	YIM1	P28625	365 aa		4.37	□□□□□ -1.71
NGL3	YML118W	SUR1	P33300	382 aa		4.37	□□□□□ -1.71
NGL3	YML118W	TSC10	P38342	320 aa		4.37	□□□□□ -1.71
NGL3	YML118W	SUL1	P38359	859 aa		4.37	□□□□□ -1.71
NGL3	YML118W	CHS6	P40955	746 aa		4.37	□□□□□ -1.71
NGL3	YML118W	PHO23	P50947	330 aa		4.37	□□□□□ -1.71
NGL3	YML118W	COQ9	Q05779	260 aa		4.37	□□□□□ -1.71
NGL3	YML118W	LEA1	Q08963	238 aa	Predicted RBP	4.37	□□□□□ -1.71
NGL3	YML118W	AEP3	Q12089	606 aa		4.37	□□□□□ -1.71
NGL3	YML118W	RTC5	Q12108	567 aa	Known RBP	4.37	□□□□□ -1.71
NGL3	YML118W	HER1	Q12276	1246 aa		4.37	□□□□□ -1.71
NGL3	YML118W	MDY2	Q12285	212 aa		4.37	□□□□□ -1.71
NGL3	YML118W	MDM20	Q12387	796 aa	Known RBP	4.37	□□□□□ -1.71
NGL3	YML118W	AHA1	Q12449	350 aa	Known RBP	4.37	□□□□□ -1.71
NGL3	YML118W	TRM732	Q03496	1420 aa		4.37	□□□□□ -1.71
NGL3	YML118W	YLR278C	Q05854	1341 aa		4.37	□□□□□ -1.71
NGL3	YML118W	SRV2	P17555	526 aa	Known RBP	4.36	□□□□□ -1.71
NGL3	YML118W	CLN1	P20437	546 aa		4.36	□□□□□ -1.71
NGL3	YML118W	GLG1	P36143	616 aa		4.36	□□□□□ -1.71
NGL3	YML118W	IMD2	P38697	523 aa	Known RBP	4.36	□□□□□ -1.71
NGL3	YML118W	PCL5	P38794	229 aa		4.36	□□□□□ -1.71
NGL3	YML118W	CIN4	P39110	191 aa		4.36	□□□□□ -1.71
NGL3	YML118W	OPT1	P40897	799 aa		4.36	□□□□□ -1.71
NGL3	YML118W	YFR016C	P43597	1233 aa	Known RBP	4.36	□□□□□ -1.71
NGL3	YML118W	CUE3	P53137	624 aa	Known RBP	4.36	□□□□□ -1.71
NGL3	YML118W	RPT4	P53549	437 aa	Known RBP	4.36	□□□□□ -1.71
NGL3	YML118W	ERV25	P54837	211 aa	Known RBP	4.36	□□□□□ -1.71
NGL3	YML118W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
NGL3	YML118W	YMR160W	Q03823	816 aa		4.36	□□□□□ -1.71
NGL3	YML118W	ARO10	Q06408	635 aa		4.36	□□□□□ -1.71
NGL3	YML118W	YDR061W	Q12298	539 aa		4.36	□□□□□ -1.71
NGL3	YML118W	RRP36	Q12481	300 aa	Predicted RBP	4.36	□□□□□ -1.71
NGL3	YML118W	AFG1	P32317	509 aa		4.36	□□□□□ -1.71
NGL3	YML118W	SPC110	P32380	944 aa		4.36	□□□□□ -1.71
NGL3	YML118W	IME2	P32581	645 aa		4.36	□□□□□ -1.71
NGL3	YML118W	RIB7	P33312	244 aa		4.36	□□□□□ -1.71
NGL3	YML118W	RPL32	P38061	130 aa	Known RBP	4.36	□□□□□ -1.71
NGL3	YML118W	YHR218W	P38899	603 aa		4.36	□□□□□ -1.71
NGL3	YML118W	YTA12	P40341	825 aa		4.36	□□□□□ -1.71
NGL3	YML118W	YIL089W	P40500	205 aa		4.36	□□□□□ -1.71
NGL3	YML118W	EPL1	P43572	832 aa		4.36	□□□□□ -1.71
NGL3	YML118W	ECM27	P47144	725 aa		4.36	□□□□□ -1.71
NGL3	YML118W	ERG26	P53199	349 aa	Known RBP	4.36	□□□□□ -1.71
NGL3	YML118W	MSC1	Q03104	513 aa		4.36	□□□□□ -1.71
NGL3	YML118W	YMR130W	Q04223	302 aa		4.36	□□□□□ -1.71
NGL3	YML118W	NOP6	Q07623	225 aa	Known RBP	4.36	□□□□□ -1.71
NGL3	YML118W	SLK19	Q08581	821 aa	Known RBP	4.36	□□□□□ -1.71
NGL3	YML118W	MED2	Q12124	431 aa		4.36	□□□□□ -1.71
NGL3	YML118W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.36	□□□□□ -1.71
NGL3	YML118W	ARG81	P05085	880 aa		4.35	□□□□□ -1.71
NGL3	YML118W	SPS4	P09937	338 aa		4.35	□□□□□ -1.71
NGL3	YML118W	KRS1	P15180	591 aa	Known RBP	4.35	□□□□□ -1.71
NGL3	YML118W	DAL80	P26343	269 aa		4.35	□□□□□ -1.71
NGL3	YML118W	GAC1	P28006	793 aa		4.35	□□□□□ -1.71
NGL3	YML118W	RAD14	P28519	371 aa		4.35	□□□□□ -1.71
NGL3	YML118W	PCH2	P38126	564 aa		4.35	□□□□□ -1.71
NGL3	YML118W	DBP8	P38719	431 aa		4.35	□□□□□ -1.71
NGL3	YML118W	MIT1	P40002	666 aa		4.35	□□□□□ -1.71
NGL3	YML118W	YJL107C	P42947	387 aa		4.35	□□□□□ -1.71
NGL3	YML118W	YFL015C	P43578	164 aa		4.35	□□□□□ -1.71
NGL3	YML118W	YGL117W	P53133	265 aa		4.35	□□□□□ -1.71
NGL3	YML118W	TOF2	Q02208	771 aa		4.35	□□□□□ -1.71
NGL3	YML118W	YMR178W	Q03219	274 aa	Known RBP	4.35	□□□□□ -1.71
NGL3	YML118W	RPN9	Q04062	393 aa	Known RBP	4.35	□□□□□ -1.71
NGL3	YML118W	EMI2	Q04409	500 aa	Known RBP	4.35	□□□□□ -1.71
NGL3	YML118W	CDC45	Q08032	650 aa		4.35	□□□□□ -1.71
NGL3	YML118W	UBX3	Q12229	455 aa		4.35	□□□□□ -1.71
NGL3	YML118W	RTC1	Q08281	1341 aa		4.34	□□□□□ -1.71
NGL3	YML118W	BUD5	P25300	642 aa	Predicted RBP	4.34	□□□□□ -1.71
NGL3	YML118W	NIP1	P32497	812 aa	Known RBP	4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms