RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W ALR1Q08269 859 aa3.82□□□□□ -1.8
USA1YML029W CHS5Q12114 671 aaKnown RBP3.82□□□□□ -1.8
USA1YML029W NMT1P14743 455 aa3.81□□□□□ -1.8
USA1YML029W BAS1P22035 811 aa3.81□□□□□ -1.8
USA1YML029W SPR1P32603 445 aa3.81□□□□□ -1.8
USA1YML029W YSC84P32793 468 aa3.81□□□□□ -1.8
USA1YML029W DUT1P33317 147 aa3.81□□□□□ -1.8
USA1YML029W IRS4P36115 615 aaKnown RBP3.81□□□□□ -1.8
USA1YML029W VRP1P37370 817 aa3.81□□□□□ -1.8
USA1YML029W HEK2P38199 381 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8 RIP-Chip
USA1YML029W RRP3P38712 501 aaKnown RBP3.81□□□□□ -1.8
USA1YML029W RLP7P40693 322 aaKnown RBP3.81□□□□□ -1.8
USA1YML029W MAD3P47074 515 aa3.81□□□□□ -1.8
USA1YML029W YGR012WP53206 393 aa3.81□□□□□ -1.8
USA1YML029W CLD1P53264 445 aa3.81□□□□□ -1.8
USA1YML029W EGD1Q02642 157 aaKnown RBP3.81□□□□□ -1.8
USA1YML029W IRC15Q02733 499 aa3.81□□□□□ -1.8
USA1YML029W SVL3Q03088 825 aaKnown RBP3.81□□□□□ -1.8
USA1YML029W TVP15Q03860 143 aa3.81□□□□□ -1.8
USA1YML029W EMI1Q04406 187 aa3.81□□□□□ -1.8
USA1YML029W RCO1Q04779 684 aa3.81□□□□□ -1.8
USA1YML029W SEC10Q06245 871 aa3.81□□□□□ -1.8
USA1YML029W HDA3Q06623 655 aa3.81□□□□□ -1.8
USA1YML029W YLR413WQ06689 675 aa3.81□□□□□ -1.8
USA1YML029W ATG10Q07879 167 aa3.81□□□□□ -1.8
USA1YML029W THI73Q07904 523 aa3.81□□□□□ -1.8
USA1YML029W RRP36Q12481 300 aaPredicted RBP3.81□□□□□ -1.8
USA1YML029W NAG1Q8TGN9 163 aa3.81□□□□□ -1.8
USA1YML029W STE3P06783 470 aa3.81□□□□□ -1.8
USA1YML029W RNA1P11745 407 aaKnown RBP3.81□□□□□ -1.8
USA1YML029W HSC82P15108 705 aaKnown RBP3.81□□□□□ -1.8
USA1YML029W PRP16P15938 1071 aaPredicted RBP3.81□□□□□ -1.8
USA1YML029W PRI2P20457 528 aa3.81□□□□□ -1.8
USA1YML029W VPS34P22543 875 aa3.81□□□□□ -1.8
USA1YML029W SPS22P25380 463 aa3.81□□□□□ -1.8
USA1YML029W RPC19P28000 142 aaKnown RBP3.81□□□□□ -1.8
USA1YML029W CRM1P30822 1084 aaKnown RBP3.81□□□□□ -1.8
USA1YML029W YBR071WP38243 211 aa3.81□□□□□ -1.8
USA1YML029W YDR089WP38966 869 aa3.81□□□□□ -1.8
USA1YML029W SSU1P41930 458 aa3.81□□□□□ -1.8
USA1YML029W EMC4P53073 190 aa3.81□□□□□ -1.8
USA1YML029W OSH6Q02201 448 aa3.81□□□□□ -1.8
USA1YML029W RPM2Q02773 1202 aa3.81□□□□□ -1.8
USA1YML029W YMR155WQ03795 547 aa3.81□□□□□ -1.8
USA1YML029W CSN9Q03981 162 aa3.81□□□□□ -1.8
USA1YML029W ISR1Q06098 443 aaKnown RBP3.81□□□□□ -1.8
USA1YML029W TMA46Q12000 345 aaKnown RBP3.81□□□□□ -1.8
USA1YML029W APC9Q12107 265 aa3.81□□□□□ -1.8
USA1YML029W MDY2Q12285 212 aa3.81□□□□□ -1.8
USA1YML029W YPT6Q99260 215 aa3.81□□□□□ -1.8
USA1YML029W MPH2P0CD99 609 aa3.8□□□□□ -1.8
USA1YML029W PHO3P24031 467 aa3.8□□□□□ -1.8
USA1YML029W MRPL9P31334 269 aa3.8□□□□□ -1.8
USA1YML029W RML2P32611 393 aa3.8□□□□□ -1.8
USA1YML029W ASK1P35734 292 aa3.8□□□□□ -1.8
USA1YML029W RRN3P36070 627 aa3.8□□□□□ -1.8
USA1YML029W CTP1P38152 299 aa3.8□□□□□ -1.8
USA1YML029W BZZ1P38822 633 aa3.8□□□□□ -1.8
USA1YML029W NDE1P40215 560 aa3.8□□□□□ -1.8
USA1YML029W YJR149WP47177 404 aa3.8□□□□□ -1.8
USA1YML029W YGR015CP53208 328 aa3.8□□□□□ -1.8
USA1YML029W VAC7P53950 1165 aa3.8□□□□□ -1.8
USA1YML029W YMR102CQ03177 834 aa3.8□□□□□ -1.8
USA1YML029W TRM12Q04235 462 aa3.8□□□□□ -1.8
USA1YML029W YMR034CQ05131 434 aaPredicted RBP3.8□□□□□ -1.8
USA1YML029W CRN1Q06440 651 aa3.8□□□□□ -1.8
USA1YML029W PSR1Q07800 427 aa3.8□□□□□ -1.8
USA1YML029W RTT10Q08924 1013 aa3.8□□□□□ -1.8
USA1YML029W YIG1Q08956 461 aa3.8□□□□□ -1.8
USA1YML029W MRH1Q12117 320 aaPredicted RBP3.8□□□□□ -1.8
USA1YML029W UBX3Q12229 455 aa3.8□□□□□ -1.8
USA1YML029W RIB2Q12362 591 aaKnown RBP3.8□□□□□ -1.8
USA1YML029W FAB1P34756 2278 aa3.8□□□□□ -1.8
USA1YML029W SPT3P06844 337 aa3.8□□□□□ -1.8
USA1YML029W ARG1P22768 420 aa3.8□□□□□ -1.8
USA1YML029W VAC17P25591 423 aa3.8□□□□□ -1.8
USA1YML029W COX13P32799 129 aa3.8□□□□□ -1.8
USA1YML029W RPS0AP32905 252 aaKnown RBP3.8□□□□□ -1.8
USA1YML029W NTR2P36118 322 aaPredicted RBP3.8□□□□□ -1.8
USA1YML029W TAE1P38340 232 aa3.8□□□□□ -1.8
USA1YML029W RIM11P38615 370 aa3.8□□□□□ -1.8
USA1YML029W YHR112CP38716 378 aa3.8□□□□□ -1.8
USA1YML029W NPT1P39683 429 aaKnown RBP3.8□□□□□ -1.8
USA1YML029W PTC2P39966 464 aaKnown RBP3.8□□□□□ -1.8
USA1YML029W MGS1P40151 587 aa3.8□□□□□ -1.8
USA1YML029W IAH1P41734 238 aa3.8□□□□□ -1.8
USA1YML029W SUM1P46676 1062 aa3.8□□□□□ -1.8
USA1YML029W EFM5P53200 248 aaKnown RBP3.8□□□□□ -1.8
USA1YML029W GTR2P53290 341 aa3.8□□□□□ -1.8
USA1YML029W NOP19P53317 196 aaPredicted RBP3.8□□□□□ -1.8
USA1YML029W IBD2P53892 351 aa3.8□□□□□ -1.8
USA1YML029W YML131WQ03102 365 aa3.8□□□□□ -1.8
USA1YML029W ARX1Q03862 593 aaKnown RBP3.8□□□□□ -1.8
USA1YML029W BDS1Q08347 646 aa3.8□□□□□ -1.8
USA1YML029W UAF30Q08747 228 aa3.8□□□□□ -1.8
USA1YML029W YDR056CQ12025 205 aa3.8□□□□□ -1.8
USA1YML029W LEU9Q12166 604 aaKnown RBP3.8□□□□□ -1.8
USA1YML029W SUL2Q12325 893 aa3.8□□□□□ -1.8
USA1YML029W RHO2P06781 192 aa3.79□□□□□ -1.8
USA1YML029W SEC53P07283 254 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms