RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W STR3P53101 465 aaKnown RBP2.34□□□□□ -2.03
SEC22YLR268W GLO2Q05584 274 aa2.34□□□□□ -2.03
SEC22YLR268W ENT4Q07872 247 aa2.34□□□□□ -2.03
SEC22YLR268W YCL021W-AQ96VH3 125 aa2.34□□□□□ -2.03
SEC22YLR268W RPL20AP0CX23 172 aaKnown RBP2.33□□□□□ -2.04
SEC22YLR268W RPL20BP0CX24 172 aaPredicted RBP2.33□□□□□ -2.04
SEC22YLR268W PAH1P32567 862 aa2.33□□□□□ -2.04
SEC22YLR268W SWE1P32944 819 aa2.33□□□□□ -2.04
SEC22YLR268W MUD2P36084 527 aaKnown RBP2.33□□□□□ -2.04
SEC22YLR268W ARP1P38696 384 aa2.33□□□□□ -2.04
SEC22YLR268W LAG1P38703 411 aa2.33□□□□□ -2.04
SEC22YLR268W NPR2P39923 615 aa2.33□□□□□ -2.04
SEC22YLR268W TMA108P40462 946 aa2.33□□□□□ -2.04
SEC22YLR268W LYS14P40971 790 aa2.33□□□□□ -2.04
SEC22YLR268W PIL1P53252 339 aaKnown RBP2.33□□□□□ -2.04
SEC22YLR268W INN1P53901 409 aa2.33□□□□□ -2.04
SEC22YLR268W ZDS2P54786 942 aa2.33□□□□□ -2.04
SEC22YLR268W YSA1Q01976 231 aa2.33□□□□□ -2.04
SEC22YLR268W INA17Q02888 182 aa2.33□□□□□ -2.04
SEC22YLR268W RAD30Q04049 632 aa2.33□□□□□ -2.04
SEC22YLR268W PSR1Q07800 427 aa2.33□□□□□ -2.04
SEC22YLR268W RIX7Q07844 837 aaKnown RBP2.33□□□□□ -2.04
SEC22YLR268W SDH5Q08230 162 aa2.33□□□□□ -2.04
SEC22YLR268W YDR056CQ12025 205 aa2.33□□□□□ -2.04
SEC22YLR268W AYT1Q12226 474 aa2.33□□□□□ -2.04
SEC22YLR268W RPL19AP0CX82 189 aaKnown RBP2.32□□□□□ -2.04
SEC22YLR268W RPL19BP0CX83 189 aaPredicted RBP2.32□□□□□ -2.04
SEC22YLR268W PGS1P25578 521 aa2.32□□□□□ -2.04
SEC22YLR268W PDB1P32473 366 aaKnown RBP2.32□□□□□ -2.04
SEC22YLR268W SAC6P32599 642 aaKnown RBP2.32□□□□□ -2.04
SEC22YLR268W SIP2P34164 415 aaKnown RBP2.32□□□□□ -2.04
SEC22YLR268W ECM15P35195 104 aa2.32□□□□□ -2.04
SEC22YLR268W DIA4P38705 446 aaPredicted RBP2.32□□□□□ -2.04
SEC22YLR268W ANS1P38832 159 aa2.32□□□□□ -2.04
SEC22YLR268W BUR6P40096 142 aa2.32□□□□□ -2.04
SEC22YLR268W RPS7BP48164 190 aaKnown RBP2.32□□□□□ -2.04
SEC22YLR268W ADE13Q05911 482 aaKnown RBP2.32□□□□□ -2.04
SEC22YLR268W VIP1Q06685 1146 aaKnown RBP2.32□□□□□ -2.04
SEC22YLR268W ATG9Q12142 997 aa2.32□□□□□ -2.04
SEC22YLR268W ENT1Q12518 454 aa2.32□□□□□ -2.04
SEC22YLR268W SEM1O94742 89 aa2.31□□□□□ -2.04
SEC22YLR268W HEM2P05373 342 aa2.31□□□□□ -2.04
SEC22YLR268W VMA16P23968 213 aa2.31□□□□□ -2.04
SEC22YLR268W SNU114P36048 1008 aaKnown RBP2.31□□□□□ -2.04
SEC22YLR268W MAL33P38157 468 aa2.31□□□□□ -2.04
SEC22YLR268W YBL029WP38201 376 aa2.31□□□□□ -2.04
SEC22YLR268W MTC4P38335 694 aaKnown RBP2.31□□□□□ -2.04
SEC22YLR268W YNG2P38806 282 aaKnown RBP2.31□□□□□ -2.04
SEC22YLR268W NAB3P38996 802 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
SEC22YLR268W DIA3P52290 468 aa2.31□□□□□ -2.04
SEC22YLR268W DUO1P53168 247 aaKnown RBP2.31□□□□□ -2.04
SEC22YLR268W YKU80Q04437 629 aa2.31□□□□□ -2.04
SEC22YLR268W ECM30Q06673 1274 aa2.31□□□□□ -2.04
SEC22YLR268W THI20Q08224 551 aa2.31□□□□□ -2.04
SEC22YLR268W TMC1Q08422 150 aaPredicted RBP2.31□□□□□ -2.04
SEC22YLR268W TCO89Q08921 799 aa2.31□□□□□ -2.04
SEC22YLR268W HUA2Q12134 243 aa2.31□□□□□ -2.04
SEC22YLR268W NOP58Q12499 511 aaKnown RBP2.31□□□□□ -2.04
SEC22YLR268W RRP12Q12754 1228 aaKnown RBP2.31□□□□□ -2.04
SEC22YLR268W YBR126W-AQ8TGU7 68 aa2.31□□□□□ -2.04
SEC22YLR268W PUT2P07275 575 aa2.3□□□□□ -2.04
SEC22YLR268W ADH7P25377 361 aa2.3□□□□□ -2.04
SEC22YLR268W TUL1P36096 758 aa2.3□□□□□ -2.04
SEC22YLR268W NOP16P40007 231 aaKnown RBP2.3□□□□□ -2.04
SEC22YLR268W CSM2P40465 213 aa2.3□□□□□ -2.04
SEC22YLR268W UPF3P48412 387 aaKnown RBP2.3□□□□□ -2.04
SEC22YLR268W SMM1P53720 384 aaKnown RBP2.3□□□□□ -2.04
SEC22YLR268W YLR152CP54072 576 aa2.3□□□□□ -2.04
SEC22YLR268W VPS72Q03388 795 aa2.3□□□□□ -2.04
SEC22YLR268W DIC1Q06143 298 aa2.3□□□□□ -2.04
SEC22YLR268W HNT3Q08702 217 aa2.3□□□□□ -2.04
SEC22YLR268W RRI2Q12348 645 aa2.3□□□□□ -2.04
SEC22YLR268W SPT15P13393 240 aaKnown RBP2.29□□□□□ -2.04
SEC22YLR268W KAR3P17119 729 aa2.29□□□□□ -2.04
SEC22YLR268W AAC3P18238 307 aa2.29□□□□□ -2.04
SEC22YLR268W PWP1P21304 576 aaKnown RBP2.29□□□□□ -2.04
SEC22YLR268W YCK1P23291 538 aa2.29□□□□□ -2.04
SEC22YLR268W YIH1P25637 258 aa2.29□□□□□ -2.04
SEC22YLR268W IMP2'P32351 346 aa2.29□□□□□ -2.04
SEC22YLR268W TSC10P38342 320 aa2.29□□□□□ -2.04
SEC22YLR268W SGM1P47166 707 aa2.29□□□□□ -2.04
SEC22YLR268W TIS11P47977 285 aa2.29□□□□□ -2.04
SEC22YLR268W ERG26P53199 349 aaKnown RBP2.29□□□□□ -2.04
SEC22YLR268W DUG3P53871 357 aa2.29□□□□□ -2.04
SEC22YLR268W YPL014WQ02606 381 aa2.29□□□□□ -2.04
SEC22YLR268W YML037CQ03703 340 aa2.29□□□□□ -2.04
SEC22YLR268W BUD22Q04347 519 aaKnown RBP2.29□□□□□ -2.04
SEC22YLR268W LEU9Q12166 604 aaKnown RBP2.29□□□□□ -2.04
SEC22YLR268W SEC53P07283 254 aaKnown RBP2.28□□□□□ -2.04
SEC22YLR268W ARD1P07347 238 aaPredicted RBP2.28□□□□□ -2.04
SEC22YLR268W ATR1P13090 542 aa2.28□□□□□ -2.04
SEC22YLR268W ISY1P21374 235 aaPredicted RBP2.28□□□□□ -2.04
SEC22YLR268W POL4P25615 582 aa2.28□□□□□ -2.04
SEC22YLR268W DEG1P31115 442 aaKnown RBP2.28□□□□□ -2.04
SEC22YLR268W NOP4P37838 685 aaKnown RBP2.28□□□□□ -2.04
SEC22YLR268W ELO1P39540 310 aa2.28□□□□□ -2.04
SEC22YLR268W FLC2P39719 783 aa2.28□□□□□ -2.04
SEC22YLR268W AFG3P39925 761 aa2.28□□□□□ -2.04
SEC22YLR268W PTR3P43606 678 aa2.28□□□□□ -2.04
SEC22YLR268W LYS4P49367 693 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms