RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B HOS4P40480 1083 aa3.41□□□□□ -1.86
YLR227W-BYLR227W-B IMA5P40884 581 aa3.41□□□□□ -1.86
YLR227W-BYLR227W-B RGD2P43556 714 aa3.41□□□□□ -1.86
YLR227W-BYLR227W-B VPS68Q12016 184 aa3.41□□□□□ -1.86
YLR227W-BYLR227W-B LDB17Q12342 491 aa3.41□□□□□ -1.86
YLR227W-BYLR227W-B PEP12P32854 288 aa3.41□□□□□ -1.86
YLR227W-BYLR227W-B TPO5P36029 618 aa3.41□□□□□ -1.86
YLR227W-BYLR227W-B TOK1P40310 691 aa3.41□□□□□ -1.86
YLR227W-BYLR227W-B CIN1P40987 1014 aa3.41□□□□□ -1.86
YLR227W-BYLR227W-B ALO1P54783 526 aaKnown RBP3.41□□□□□ -1.86
YLR227W-BYLR227W-B RHO3Q00245 231 aaKnown RBP3.41□□□□□ -1.86
YLR227W-BYLR227W-B RSA3Q05942 220 aaKnown RBP3.41□□□□□ -1.86
YLR227W-BYLR227W-B DBP10Q12389 995 aaKnown RBP3.41□□□□□ -1.86
YLR227W-BYLR227W-B ATP2P00830 511 aaKnown RBP3.4□□□□□ -1.86
YLR227W-BYLR227W-B SPS4P09937 338 aa3.4□□□□□ -1.86
YLR227W-BYLR227W-B MGR1P25573 417 aa3.4□□□□□ -1.86
YLR227W-BYLR227W-B POL4P25615 582 aa3.4□□□□□ -1.86
YLR227W-BYLR227W-B RAD23P32628 398 aaKnown RBP3.4□□□□□ -1.86
YLR227W-BYLR227W-B CDC13P32797 924 aaKnown RBP3.4□□□□□ -1.86
YLR227W-BYLR227W-B MET18P40469 1032 aa3.4□□□□□ -1.86
YLR227W-BYLR227W-B GLG2P47011 380 aa3.4□□□□□ -1.86
YLR227W-BYLR227W-B ECM22Q05958 814 aaPredicted RBP3.4□□□□□ -1.86
YLR227W-BYLR227W-B YOR012WQ12351 137 aa3.4□□□□□ -1.86
YLR227W-BYLR227W-B CDC37P06101 506 aaKnown RBP3.4□□□□□ -1.87
YLR227W-BYLR227W-B DUN1P39009 513 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B SEC9P40357 651 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B LAS21P40367 830 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B SAM37P50110 327 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B ASI1P54074 624 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B EFR3Q03653 782 aaKnown RBP3.4□□□□□ -1.87
YLR227W-BYLR227W-B DON1Q05610 365 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B ATG29Q12092 213 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B MDM32Q12171 622 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B AMD1P15274 810 aaKnown RBP3.4□□□□□ -1.87
YLR227W-BYLR227W-B YMR124WP39523 943 aaKnown RBP3.4□□□□□ -1.87
YLR227W-BYLR227W-B PIC2P40035 300 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B NPY1P53164 384 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B BTN2P53286 410 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B MIX14Q04341 121 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B GMC1Q04399 608 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B MRPL25P23369 157 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B HYM1P32464 399 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B COX13P32799 129 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B DBP7P36120 742 aaKnown RBP3.4□□□□□ -1.87
YLR227W-BYLR227W-B ASC1P38011 319 aaKnown RBP3.4□□□□□ -1.87
YLR227W-BYLR227W-B CIC1P38779 376 aaKnown RBP3.4□□□□□ -1.87
YLR227W-BYLR227W-B AIR1P40507 360 aaKnown RBP3.4□□□□□ -1.87
YLR227W-BYLR227W-B DAS1P47005 663 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B OSH6Q02201 448 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B TEN1Q07921 160 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B YPL191CQ08930 360 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B YOR214CQ12282 236 aa3.4□□□□□ -1.87
YLR227W-BYLR227W-B ERG9P29704 444 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B NFU1P32860 256 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B LRG1P35688 1017 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B HXT7P39004 570 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B STB4P50104 949 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B SLG1P54867 378 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B MYO5Q04439 1219 aaKnown RBP3.39□□□□□ -1.87
YLR227W-BYLR227W-B VPS36Q06696 566 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B NOP6Q07623 225 aaKnown RBP3.39□□□□□ -1.87
YLR227W-BYLR227W-B GLK1P17709 500 aaKnown RBP3.39□□□□□ -1.87
YLR227W-BYLR227W-B HEM3P28789 327 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B DAL3P32459 195 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B SEC61P32915 480 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B YKL107WP34251 309 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B SPT8P38915 602 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B ARF3P40994 183 aaRIP-Chip data3.39□□□□□ -1.87not detected
YLR227W-BYLR227W-B MRPS35P53292 345 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B TEP1P53916 434 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B ADE13Q05911 482 aaKnown RBP3.39□□□□□ -1.87
YLR227W-BYLR227W-B MHR1Q06630 226 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B SAM3Q08986 587 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B Q0182Q9ZZW1 134 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B YIL177CP40434 1758 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B YJL225CP40889 1758 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B RBK1P25332 333 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B DYS1P38791 387 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B MPT5P39016 859 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
YLR227W-BYLR227W-B GPD2P41911 440 aaKnown RBP3.39□□□□□ -1.87
YLR227W-BYLR227W-B ARG5,6Q01217 863 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B GMC2Q06201 188 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B RPL11AP0C0W9 174 aaKnown RBP3.39□□□□□ -1.87
YLR227W-BYLR227W-B YRA2P36036 203 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
YLR227W-BYLR227W-B PFS1P38872 237 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B RPH1P39956 796 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B SHR5P41912 237 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B YNL140CP53910 189 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B SOV1Q04748 898 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B SAM4Q08985 325 aaKnown RBP3.39□□□□□ -1.87
YLR227W-BYLR227W-B ZPS1Q12512 249 aa3.39□□□□□ -1.87
YLR227W-BYLR227W-B RPL11BQ3E757 174 aaPredicted RBP3.39□□□□□ -1.87
YLR227W-BYLR227W-B VBA3P25594 458 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B RPB9P27999 122 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B ZTA1P38230 334 aaKnown RBP3.38□□□□□ -1.87
YLR227W-BYLR227W-B YHL008CP38750 627 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B AXL2P38928 823 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B LYS9P38999 446 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B VRG4P40107 337 aa3.38□□□□□ -1.87
YLR227W-BYLR227W-B MPH1P40562 993 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms