RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C YMR147WP40218 223 aaKnown RBP4.23□□□□□ -1.73
SDS3YIL084C SEC24P40482 926 aaKnown RBP4.23□□□□□ -1.73
SDS3YIL084C SIP4P46954 829 aa4.23□□□□□ -1.73
SDS3YIL084C PIL1P53252 339 aaKnown RBP4.23□□□□□ -1.73
SDS3YIL084C YNR061CP53747 219 aa4.23□□□□□ -1.73
SDS3YIL084C ECM22Q05958 814 aaPredicted RBP4.23□□□□□ -1.73
SDS3YIL084C CDC16P09798 840 aa4.22□□□□□ -1.73
SDS3YIL084C TVP23P38962 199 aa4.22□□□□□ -1.73
SDS3YIL084C NAB3P38996 802 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
SDS3YIL084C PKP1P40530 394 aa4.22□□□□□ -1.73
SDS3YIL084C YFR020WP43600 232 aa4.22□□□□□ -1.73
SDS3YIL084C DPB11P47027 764 aaPredicted RBP4.22□□□□□ -1.73
SDS3YIL084C SEC5P89102 971 aa4.22□□□□□ -1.73
SDS3YIL084C MRPL1Q04599 285 aa4.22□□□□□ -1.73
SDS3YIL084C TMA64Q04600 565 aaKnown RBP4.22□□□□□ -1.73
SDS3YIL084C YMR321CQ04898 105 aa4.22□□□□□ -1.73
SDS3YIL084C PSR1Q07800 427 aa4.22□□□□□ -1.73
SDS3YIL084C ENT4Q07872 247 aa4.22□□□□□ -1.73
SDS3YIL084C TCO89Q08921 799 aa4.22□□□□□ -1.73
SDS3YIL084C ERP3Q12403 225 aa4.22□□□□□ -1.73
SDS3YIL084C CYB2P00175 591 aa4.21□□□□□ -1.74
SDS3YIL084C GAL4P04386 881 aa4.21□□□□□ -1.74
SDS3YIL084C SAC1P32368 623 aaKnown RBP4.21□□□□□ -1.74
SDS3YIL084C MUD2P36084 527 aaKnown RBP4.21□□□□□ -1.74
SDS3YIL084C YBL029WP38201 376 aa4.21□□□□□ -1.74
SDS3YIL084C REG2P38232 338 aa4.21□□□□□ -1.74
SDS3YIL084C PHO88P38264 188 aaPredicted RBP4.21□□□□□ -1.74
SDS3YIL084C SPC97P38863 823 aa4.21□□□□□ -1.74
SDS3YIL084C FLO5P38894 1075 aa4.21□□□□□ -1.74
SDS3YIL084C RTS1P38903 757 aa4.21□□□□□ -1.74
SDS3YIL084C YMR124WP39523 943 aaKnown RBP4.21□□□□□ -1.74
SDS3YIL084C SMC3P47037 1230 aa4.21□□□□□ -1.74
SDS3YIL084C VPS25P47142 202 aa4.21□□□□□ -1.74
SDS3YIL084C AZR1P50080 613 aa4.21□□□□□ -1.74
SDS3YIL084C INN1P53901 409 aa4.21□□□□□ -1.74
SDS3YIL084C INA17Q02888 182 aa4.21□□□□□ -1.74
SDS3YIL084C RAD30Q04049 632 aa4.21□□□□□ -1.74
SDS3YIL084C SUE1Q06524 206 aa4.21□□□□□ -1.74
SDS3YIL084C YDR056CQ12025 205 aa4.21□□□□□ -1.74
SDS3YIL084C HUA2Q12134 243 aa4.21□□□□□ -1.74
SDS3YIL084C YER145C-AA0A023PYF4 145 aa4.2□□□□□ -1.74
SDS3YIL084C YPR089WO13585 888 aa4.2□□□□□ -1.74
SDS3YIL084C SUI2P20459 304 aaKnown RBP4.2□□□□□ -1.74
SDS3YIL084C TKL1P23254 680 aaKnown RBP4.2□□□□□ -1.74
SDS3YIL084C STE50P25344 346 aa4.2□□□□□ -1.74
SDS3YIL084C MCM4P30665 933 aaKnown RBP4.2□□□□□ -1.74
SDS3YIL084C PDB1P32473 366 aaKnown RBP4.2□□□□□ -1.74
SDS3YIL084C ECM32P32644 1121 aaKnown RBP4.2□□□□□ -1.74
SDS3YIL084C DBP7P36120 742 aaKnown RBP4.2□□□□□ -1.74
SDS3YIL084C PXL1P36166 706 aa4.2□□□□□ -1.74
SDS3YIL084C AGP2P38090 596 aa4.2□□□□□ -1.74
SDS3YIL084C DIA4P38705 446 aaPredicted RBP4.2□□□□□ -1.74
SDS3YIL084C YNG2P38806 282 aaKnown RBP4.2□□□□□ -1.74
SDS3YIL084C NDT80P38830 627 aa4.2□□□□□ -1.74
SDS3YIL084C UIP3P39547 235 aa4.2□□□□□ -1.74
SDS3YIL084C BUR6P40096 142 aa4.2□□□□□ -1.74
SDS3YIL084C YTA12P40341 825 aa4.2□□□□□ -1.74
SDS3YIL084C PCI8P40512 444 aa4.2□□□□□ -1.74
SDS3YIL084C YPT11P48559 417 aa4.2□□□□□ -1.74
SDS3YIL084C NNF2P53253 936 aa4.2□□□□□ -1.74
SDS3YIL084C EAF7P53911 425 aaKnown RBP4.2□□□□□ -1.74
SDS3YIL084C YSA1Q01976 231 aa4.2□□□□□ -1.74
SDS3YIL084C FRE3Q08905 711 aa4.2□□□□□ -1.74
SDS3YIL084C ATX2Q12067 313 aa4.2□□□□□ -1.74
SDS3YIL084C INP53Q12271 1107 aa4.2□□□□□ -1.74
SDS3YIL084C RIF1P29539 1916 aa4.2□□□□□ -1.74
SDS3YIL084C CHO1P08456 276 aa4.19□□□□□ -1.74
SDS3YIL084C VMA16P23968 213 aa4.19□□□□□ -1.74
SDS3YIL084C PPZ1P26570 692 aa4.19□□□□□ -1.74
SDS3YIL084C YKL050CP35736 922 aa4.19□□□□□ -1.74
SDS3YIL084C VPS41P38959 992 aa4.19□□□□□ -1.74
SDS3YIL084C NOP16P40007 231 aaKnown RBP4.19□□□□□ -1.74
SDS3YIL084C YGL036WP53185 909 aaPredicted RBP4.19□□□□□ -1.74
SDS3YIL084C SOL4P53315 255 aa4.19□□□□□ -1.74
SDS3YIL084C PNG1Q02890 363 aa4.19□□□□□ -1.74
SDS3YIL084C MRD1Q06106 887 aaKnown RBP4.19□□□□□ -1.74
SDS3YIL084C VIP1Q06685 1146 aaKnown RBP4.19□□□□□ -1.74
SDS3YIL084C APL4Q12028 832 aa4.19□□□□□ -1.74
SDS3YIL084C YBR126W-AQ8TGU7 68 aa4.19□□□□□ -1.74
SDS3YIL084C FMP27Q06179 2628 aa4.19□□□□□ -1.74
SDS3YIL084C SEM1O94742 89 aa4.18□□□□□ -1.74
SDS3YIL084C RPL19AP0CX82 189 aaKnown RBP4.18□□□□□ -1.74
SDS3YIL084C RPL19BP0CX83 189 aaPredicted RBP4.18□□□□□ -1.74
SDS3YIL084C PRO3P32263 286 aaKnown RBP4.18□□□□□ -1.74
SDS3YIL084C SAC6P32599 642 aaKnown RBP4.18□□□□□ -1.74
SDS3YIL084C SWE1P32944 819 aa4.18□□□□□ -1.74
SDS3YIL084C MCR1P36060 302 aaKnown RBP4.18□□□□□ -1.74
SDS3YIL084C MAL33P38157 468 aa4.18□□□□□ -1.74
SDS3YIL084C IRC8P47046 822 aa4.18□□□□□ -1.74
SDS3YIL084C RPS7BP48164 190 aaKnown RBP4.18□□□□□ -1.74
SDS3YIL084C YMR178WQ03219 274 aaKnown RBP4.18□□□□□ -1.74
SDS3YIL084C POS5Q06892 414 aa4.18□□□□□ -1.74
SDS3YIL084C BEM2P39960 2167 aaKnown RBP4.17□□□□□ -1.74
SDS3YIL084C YER190C-BP0CX94 160 aa4.17□□□□□ -1.74
SDS3YIL084C YEL077W-AP0CX95 160 aa4.17□□□□□ -1.74
SDS3YIL084C YGR296C-BP0CX96 160 aa4.17□□□□□ -1.74
SDS3YIL084C YPL283W-BP0CX97 160 aa4.17□□□□□ -1.74
SDS3YIL084C YPR204C-AP0CX98 160 aa4.17□□□□□ -1.74
SDS3YIL084C DAL5P15365 543 aa4.17□□□□□ -1.74
SDS3YIL084C SAN1P22470 610 aa4.17□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms