RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeastyeast

Gene URM1, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URM1YIL008W SET6Q12529 373 aa2.24□□□□□ -2.05
URM1YIL008W APE1P14904 514 aa2.23□□□□□ -2.05
URM1YIL008W KGD1P20967 1014 aaKnown RBP2.23□□□□□ -2.05
URM1YIL008W IMG1P25626 169 aa2.23□□□□□ -2.05
URM1YIL008W SPC110P32380 944 aa2.23□□□□□ -2.05
URM1YIL008W YKL023WP36103 277 aaKnown RBP2.23□□□□□ -2.05
URM1YIL008W NUP133P36161 1157 aa2.23□□□□□ -2.05
URM1YIL008W AVT5P38176 459 aa2.23□□□□□ -2.05
URM1YIL008W OSH3P38713 996 aaKnown RBP2.23□□□□□ -2.05
URM1YIL008W YJL132WP47014 750 aa2.23□□□□□ -2.05
URM1YIL008W SHR3Q02774 210 aa2.23□□□□□ -2.05
URM1YIL008W SSP2Q08646 371 aa2.23□□□□□ -2.05
URM1YIL008W YPL272CQ08984 517 aa2.23□□□□□ -2.05
URM1YIL008W CAR1P00812 333 aaKnown RBP2.22□□□□□ -2.05
URM1YIL008W MF(ALPHA)1P01149 165 aa2.22□□□□□ -2.05
URM1YIL008W ARD1P07347 238 aaPredicted RBP2.22□□□□□ -2.05
URM1YIL008W SGV1P23293 657 aaKnown RBP2.22□□□□□ -2.05
URM1YIL008W AGA1P32323 725 aa2.22□□□□□ -2.05
URM1YIL008W SSE2P32590 693 aaKnown RBP2.22□□□□□ -2.05
URM1YIL008W YBR144CP34215 104 aa2.22□□□□□ -2.05
URM1YIL008W RPL32P38061 130 aaKnown RBP2.22□□□□□ -2.05
URM1YIL008W YBP1P38315 674 aa2.22□□□□□ -2.05
URM1YIL008W MTC4P38335 694 aaKnown RBP2.22□□□□□ -2.05
URM1YIL008W VPS52P39904 641 aa2.22□□□□□ -2.05
URM1YIL008W NPR2P39923 615 aa2.22□□□□□ -2.05
URM1YIL008W DPH1P40487 425 aaKnown RBP2.22□□□□□ -2.05
URM1YIL008W SNG1P46950 547 aa2.22□□□□□ -2.05
URM1YIL008W APT1P49435 187 aaKnown RBP2.22□□□□□ -2.05
URM1YIL008W ALT2P52892 507 aa2.22□□□□□ -2.05
URM1YIL008W DSD1P53095 428 aa2.22□□□□□ -2.05
URM1YIL008W BUD32P53323 261 aa2.22□□□□□ -2.05
URM1YIL008W YSA1Q01976 231 aa2.22□□□□□ -2.05
URM1YIL008W MSC1Q03104 513 aa2.22□□□□□ -2.05
URM1YIL008W BUD22Q04347 519 aaKnown RBP2.22□□□□□ -2.05
URM1YIL008W SYO1Q07395 620 aa2.22□□□□□ -2.05
URM1YIL008W LUC7Q07508 261 aaPredicted RBP2.22□□□□□ -2.05
URM1YIL008W YLL056CQ12177 298 aa2.22□□□□□ -2.05
URM1YIL008W AYT1Q12226 474 aa2.22□□□□□ -2.05
URM1YIL008W RPL20AP0CX23 172 aaKnown RBP2.21□□□□□ -2.06
URM1YIL008W RPL20BP0CX24 172 aaPredicted RBP2.21□□□□□ -2.06
URM1YIL008W RPL19AP0CX82 189 aaKnown RBP2.21□□□□□ -2.06
URM1YIL008W RPL19BP0CX83 189 aaPredicted RBP2.21□□□□□ -2.06
URM1YIL008W AMD1P15274 810 aaKnown RBP2.21□□□□□ -2.06
URM1YIL008W SUI2P20459 304 aaKnown RBP2.21□□□□□ -2.06
URM1YIL008W SGF29P25554 259 aa2.21□□□□□ -2.06
URM1YIL008W YBL029WP38201 376 aa2.21□□□□□ -2.06
URM1YIL008W YGR126WP53274 230 aa2.21□□□□□ -2.06
URM1YIL008W BNA5Q05979 453 aa2.21□□□□□ -2.06
URM1YIL008W OPY2Q06810 360 aa2.21□□□□□ -2.06
URM1YIL008W NCE102Q12207 173 aaRIP-Chip data2.21□□□□□ -2.06not detected
URM1YIL008W YDL009CQ12210 107 aa2.21□□□□□ -2.06
URM1YIL008W KAR3P17119 729 aa2.2□□□□□ -2.06
URM1YIL008W SAN1P22470 610 aa2.2□□□□□ -2.06
URM1YIL008W TRX2P22803 104 aaKnown RBP2.2□□□□□ -2.06
URM1YIL008W YCK1P23291 538 aa2.2□□□□□ -2.06
URM1YIL008W YCR022CP25620 114 aa2.2□□□□□ -2.06
URM1YIL008W YIH1P25637 258 aa2.2□□□□□ -2.06
URM1YIL008W SAC6P32599 642 aaKnown RBP2.2□□□□□ -2.06
URM1YIL008W UBP11P36026 717 aa2.2□□□□□ -2.06
URM1YIL008W TIF5P38431 405 aaKnown RBP2.2□□□□□ -2.06
URM1YIL008W YHR210CP38893 341 aa2.2□□□□□ -2.06
URM1YIL008W CIN4P39110 191 aa2.2□□□□□ -2.06
URM1YIL008W IDP2P41939 412 aa2.2□□□□□ -2.06
URM1YIL008W YPI1P43587 155 aa2.2□□□□□ -2.06
URM1YIL008W YJR154WP47181 346 aa2.2□□□□□ -2.06
URM1YIL008W RTS3P53289 263 aa2.2□□□□□ -2.06
URM1YIL008W RLI1Q03195 608 aaKnown RBP2.2□□□□□ -2.06
URM1YIL008W YML037CQ03703 340 aa2.2□□□□□ -2.06
URM1YIL008W IOC4Q04213 475 aa2.2□□□□□ -2.06
URM1YIL008W YMR018WQ04364 514 aa2.2□□□□□ -2.06
URM1YIL008W SMA2Q04658 369 aa2.2□□□□□ -2.06
URM1YIL008W MRPL51Q06090 140 aaPredicted RBP2.2□□□□□ -2.06
URM1YIL008W YDL057WQ07379 328 aa2.2□□□□□ -2.06
URM1YIL008W YOR365CQ08844 703 aa2.2□□□□□ -2.06
URM1YIL008W SPE4Q12455 300 aa2.2□□□□□ -2.06
URM1YIL008W HEM2P05373 342 aa2.19□□□□□ -2.06
URM1YIL008W ATR1P13090 542 aa2.19□□□□□ -2.06
URM1YIL008W POL4P25615 582 aa2.19□□□□□ -2.06
URM1YIL008W DPB3P27344 201 aa2.19□□□□□ -2.06
URM1YIL008W CHS3P29465 1165 aa2.19□□□□□ -2.06
URM1YIL008W PMU1P36069 295 aa2.19□□□□□ -2.06
URM1YIL008W TUL1P36096 758 aa2.19□□□□□ -2.06
URM1YIL008W PCA1P38360 1216 aa2.19□□□□□ -2.06
URM1YIL008W AFG3P39925 761 aa2.19□□□□□ -2.06
URM1YIL008W SHO1P40073 367 aa2.19□□□□□ -2.06
URM1YIL008W SCD6P45978 349 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
URM1YIL008W MEP3P53390 489 aa2.19□□□□□ -2.06
URM1YIL008W SLD5Q03406 294 aa2.19□□□□□ -2.06
URM1YIL008W YKU80Q04437 629 aa2.19□□□□□ -2.06
URM1YIL008W FMP40Q08968 688 aaPredicted RBP2.19□□□□□ -2.06
URM1YIL008W YBR126W-AQ8TGU7 68 aa2.19□□□□□ -2.06
URM1YIL008W SUC2P00724 532 aa2.18□□□□□ -2.06
URM1YIL008W RAD52P06778 471 aaKnown RBP2.18□□□□□ -2.06
URM1YIL008W ART10P18634 518 aaKnown RBP2.18□□□□□ -2.06
URM1YIL008W YCR007CP25354 239 aa2.18□□□□□ -2.06
URM1YIL008W UTR4P32626 227 aa2.18□□□□□ -2.06
URM1YIL008W FRE1P32791 686 aa2.18□□□□□ -2.06
URM1YIL008W ALG8P40351 577 aa2.18□□□□□ -2.06
URM1YIL008W LYS14P40971 790 aa2.18□□□□□ -2.06
URM1YIL008W SPG5P42933 373 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms