RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W CNS1P33313 385 aa2.85□□□□□ -1.95
RPF1YHR088W YKL100CP34248 587 aa2.85□□□□□ -1.95
RPF1YHR088W YKL023WP36103 277 aaKnown RBP2.85□□□□□ -1.95
RPF1YHR088W RSM23Q01163 450 aa2.85□□□□□ -1.95
RPF1YHR088W SHR3Q02774 210 aa2.85□□□□□ -1.95
RPF1YHR088W NBP2Q12163 236 aa2.85□□□□□ -1.95
RPF1YHR088W EXO70P19658 623 aa2.84□□□□□ -1.95
RPF1YHR088W DEG1P31115 442 aaKnown RBP2.84□□□□□ -1.95
RPF1YHR088W CBF2P32504 956 aa2.84□□□□□ -1.95
RPF1YHR088W SPR1P32603 445 aa2.84□□□□□ -1.95
RPF1YHR088W MTR2P34232 184 aaKnown RBP2.84□□□□□ -1.95
RPF1YHR088W TOM20P35180 183 aa2.84□□□□□ -1.95
RPF1YHR088W PSD1P39006 500 aa2.84□□□□□ -1.95
RPF1YHR088W PIL1P53252 339 aaKnown RBP2.84□□□□□ -1.95
RPF1YHR088W YGR127WP53275 312 aa2.84□□□□□ -1.95
RPF1YHR088W INN1P53901 409 aa2.84□□□□□ -1.95
RPF1YHR088W MRPL51Q06090 140 aaPredicted RBP2.84□□□□□ -1.95
RPF1YHR088W YER078W-AQ3E7A2 54 aa2.84□□□□□ -1.95
RPF1YHR088W HHF1P02309 103 aaKnown RBP2.83□□□□□ -1.96
RPF1YHR088W NAT1P12945 854 aaKnown RBP2.83□□□□□ -1.96
RPF1YHR088W YEF3P16521 1044 aaKnown RBP2.83□□□□□ -1.96
RPF1YHR088W VMA16P23968 213 aa2.83□□□□□ -1.96
RPF1YHR088W YCR007CP25354 239 aa2.83□□□□□ -1.96
RPF1YHR088W FUN19P28003 413 aaPredicted RBP2.83□□□□□ -1.96
RPF1YHR088W ARO2P28777 376 aaKnown RBP2.83□□□□□ -1.96
RPF1YHR088W YBL059WP34224 193 aa2.83□□□□□ -1.96
RPF1YHR088W TEN1Q07921 160 aa2.83□□□□□ -1.96
RPF1YHR088W YOR387CQ08910 206 aa2.83□□□□□ -1.96
RPF1YHR088W SUI2P20459 304 aaKnown RBP2.82□□□□□ -1.96
RPF1YHR088W PWP1P21304 576 aaKnown RBP2.82□□□□□ -1.96
RPF1YHR088W FAR3P46671 204 aa2.82□□□□□ -1.96
RPF1YHR088W YJR154WP47181 346 aa2.82□□□□□ -1.96
RPF1YHR088W AAD10P47182 288 aa2.82□□□□□ -1.96
RPF1YHR088W DUG3P53871 357 aa2.82□□□□□ -1.96
RPF1YHR088W RLI1Q03195 608 aaKnown RBP2.82□□□□□ -1.96
RPF1YHR088W MHR1Q06630 226 aa2.82□□□□□ -1.96
RPF1YHR088W CTF3Q12748 733 aa2.82□□□□□ -1.96
RPF1YHR088W PTR3P43606 678 aa2.81□□□□□ -1.96
RPF1YHR088W RPS7BP48164 190 aaKnown RBP2.81□□□□□ -1.96
RPF1YHR088W UBX4P54730 416 aa2.81□□□□□ -1.96
RPF1YHR088W IRC15Q02733 499 aa2.81□□□□□ -1.96
RPF1YHR088W RTT109Q07794 436 aa2.81□□□□□ -1.96
RPF1YHR088W LSP1Q12230 341 aaKnown RBP2.81□□□□□ -1.96
RPF1YHR088W SOD1P00445 154 aaKnown RBP2.8□□□□□ -1.96
RPF1YHR088W ISY1P21374 235 aaPredicted RBP2.8□□□□□ -1.96
RPF1YHR088W RNA14P25298 677 aaKnown RBP2.8□□□□□ -1.96
RPF1YHR088W BOS1P25385 244 aa2.8□□□□□ -1.96
RPF1YHR088W YCR022CP25620 114 aa2.8□□□□□ -1.96
RPF1YHR088W MRP20P32387 263 aa2.8□□□□□ -1.96
RPF1YHR088W ALY1P36117 915 aa2.8□□□□□ -1.96
RPF1YHR088W HAT2P39984 401 aa2.8□□□□□ -1.96
RPF1YHR088W SCD6P45978 349 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
RPF1YHR088W SNG1P46950 547 aa2.8□□□□□ -1.96
RPF1YHR088W WSC2P53832 503 aa2.8□□□□□ -1.96
RPF1YHR088W YLR152CP54072 576 aa2.8□□□□□ -1.96
RPF1YHR088W ERV2Q12284 196 aa2.8□□□□□ -1.96
RPF1YHR088W CPR1P14832 162 aaKnown RBP2.79□□□□□ -1.96
RPF1YHR088W SGF29P25554 259 aa2.79□□□□□ -1.96
RPF1YHR088W NAM9P27929 486 aa2.79□□□□□ -1.96
RPF1YHR088W YIM1P28625 365 aa2.79□□□□□ -1.96
RPF1YHR088W NDT80P38830 627 aa2.79□□□□□ -1.96
RPF1YHR088W ELP2P42935 788 aa2.79□□□□□ -1.96
RPF1YHR088W EFM6P53970 246 aa2.79□□□□□ -1.96
RPF1YHR088W SLD5Q03406 294 aa2.79□□□□□ -1.96
RPF1YHR088W TMC1Q08422 150 aaPredicted RBP2.79□□□□□ -1.96
RPF1YHR088W PUP3P25451 205 aaKnown RBP2.78□□□□□ -1.96
RPF1YHR088W MRP4P32902 394 aa2.78□□□□□ -1.96
RPF1YHR088W YBL055CP34220 418 aaPredicted RBP2.78□□□□□ -1.96
RPF1YHR088W KTR3P38130 404 aaPredicted RBP2.78□□□□□ -1.96
RPF1YHR088W ICS2P38284 255 aa2.78□□□□□ -1.96
RPF1YHR088W YHR210CP38893 341 aa2.78□□□□□ -1.96
RPF1YHR088W RRT6P53117 311 aaPredicted RBP2.78□□□□□ -1.96
RPF1YHR088W ARK1P53974 638 aa2.78□□□□□ -1.96
RPF1YHR088W ELP3Q02908 557 aaKnown RBP2.78□□□□□ -1.96
RPF1YHR088W DPB4Q04603 196 aaKnown RBP2.78□□□□□ -1.96
RPF1YHR088W PBA1Q05778 276 aa2.78□□□□□ -1.96
RPF1YHR088W RRG7Q08774 242 aaPredicted RBP2.78□□□□□ -1.96
RPF1YHR088W UTR4P32626 227 aa2.77□□□□□ -1.97
RPF1YHR088W FRE1P32791 686 aa2.77□□□□□ -1.97
RPF1YHR088W PTH2P34222 208 aa2.77□□□□□ -1.97
RPF1YHR088W NUP133P36161 1157 aa2.77□□□□□ -1.97
RPF1YHR088W RFS1P38234 210 aaKnown RBP2.77□□□□□ -1.97
RPF1YHR088W YGR126WP53274 230 aa2.77□□□□□ -1.97
RPF1YHR088W CAF40P53829 373 aa2.77□□□□□ -1.97
RPF1YHR088W IVY1Q04934 453 aa2.77□□□□□ -1.97
RPF1YHR088W VID22Q05934 901 aa2.77□□□□□ -1.97
RPF1YHR088W YOR365CQ08844 703 aa2.77□□□□□ -1.97
RPF1YHR088W TRM8Q12009 286 aa2.77□□□□□ -1.97
RPF1YHR088W SSM4P40318 1319 aa2.76□□□□□ -1.97
RPF1YHR088W HEM15P16622 393 aa2.76□□□□□ -1.97
RPF1YHR088W SGV1P23293 657 aaKnown RBP2.76□□□□□ -1.97
RPF1YHR088W SDH3P33421 198 aa2.76□□□□□ -1.97
RPF1YHR088W RPL32P38061 130 aaKnown RBP2.76□□□□□ -1.97
RPF1YHR088W CIN4P39110 191 aa2.76□□□□□ -1.97
RPF1YHR088W REE1P40893 198 aa2.76□□□□□ -1.97
RPF1YHR088W APT1P49435 187 aaKnown RBP2.76□□□□□ -1.97
RPF1YHR088W ESA1Q08649 445 aa2.76□□□□□ -1.97
RPF1YHR088W TCO89Q08921 799 aa2.76□□□□□ -1.97
RPF1YHR088W HIP1P06775 603 aa2.75□□□□□ -1.97
RPF1YHR088W SNF1P06782 633 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms