RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A BUD5P25300 642 aaPredicted RBP3.15□□□□□ -1.91
YGR109W-AYGR109W-A SYN8P31377 255 aa3.15□□□□□ -1.91
YGR109W-AYGR109W-A SPC110P32380 944 aa3.15□□□□□ -1.91
YGR109W-AYGR109W-A MAL33P38157 468 aa3.15□□□□□ -1.91
YGR109W-AYGR109W-A VPS52P39904 641 aa3.15□□□□□ -1.91
YGR109W-AYGR109W-A DPB4Q04603 196 aaKnown RBP3.15□□□□□ -1.91
YGR109W-AYGR109W-A SMA2Q04658 369 aa3.15□□□□□ -1.91
YGR109W-AYGR109W-A GLO2Q05584 274 aa3.15□□□□□ -1.91
YGR109W-AYGR109W-A TCO89Q08921 799 aa3.15□□□□□ -1.91
YGR109W-AYGR109W-A CDC16P09798 840 aa3.14□□□□□ -1.91
YGR109W-AYGR109W-A RPL19AP0CX82 189 aaKnown RBP3.14□□□□□ -1.91
YGR109W-AYGR109W-A RPL19BP0CX83 189 aaPredicted RBP3.14□□□□□ -1.91
YGR109W-AYGR109W-A CDC24P11433 854 aaPredicted RBP3.14□□□□□ -1.91
YGR109W-AYGR109W-A KGD1P20967 1014 aaKnown RBP3.14□□□□□ -1.91
YGR109W-AYGR109W-A YKL100CP34248 587 aa3.14□□□□□ -1.91
YGR109W-AYGR109W-A MTC4P38335 694 aaKnown RBP3.14□□□□□ -1.91
YGR109W-AYGR109W-A CSM2P40465 213 aa3.14□□□□□ -1.91
YGR109W-AYGR109W-A ARC1P46672 376 aaKnown RBP3.14□□□□□ -1.91
YGR109W-AYGR109W-A DUG3P53871 357 aa3.14□□□□□ -1.91
YGR109W-AYGR109W-A YKU80Q04437 629 aa3.14□□□□□ -1.91
YGR109W-AYGR109W-A SDH5Q08230 162 aa3.14□□□□□ -1.91
YGR109W-AYGR109W-A ETT1Q08421 412 aaKnown RBP3.14□□□□□ -1.91
YGR109W-AYGR109W-A AYT1Q12226 474 aa3.14□□□□□ -1.91
YGR109W-AYGR109W-A KAR3P17119 729 aa3.13□□□□□ -1.91
YGR109W-AYGR109W-A YCK1P23291 538 aa3.13□□□□□ -1.91
YGR109W-AYGR109W-A PUP3P25451 205 aaKnown RBP3.13□□□□□ -1.91
YGR109W-AYGR109W-A CHS3P29465 1165 aa3.13□□□□□ -1.91
YGR109W-AYGR109W-A PCA1P38360 1216 aa3.13□□□□□ -1.91
YGR109W-AYGR109W-A OSH3P38713 996 aaKnown RBP3.13□□□□□ -1.91
YGR109W-AYGR109W-A PTR3P43606 678 aa3.13□□□□□ -1.91
YGR109W-AYGR109W-A YJL132WP47014 750 aa3.13□□□□□ -1.91
YGR109W-AYGR109W-A LCL3P53153 274 aa3.13□□□□□ -1.91
YGR109W-AYGR109W-A EFM6P53970 246 aa3.13□□□□□ -1.91
YGR109W-AYGR109W-A RPL20AP0CX23 172 aaKnown RBP3.12□□□□□ -1.91
YGR109W-AYGR109W-A RPL20BP0CX24 172 aaPredicted RBP3.12□□□□□ -1.91
YGR109W-AYGR109W-A PEP5P12868 1029 aa3.12□□□□□ -1.91
YGR109W-AYGR109W-A APE1P14904 514 aa3.12□□□□□ -1.91
YGR109W-AYGR109W-A BOS1P25385 244 aa3.12□□□□□ -1.91
YGR109W-AYGR109W-A YBL055CP34220 418 aaPredicted RBP3.12□□□□□ -1.91
YGR109W-AYGR109W-A AUR1P36107 401 aaPredicted RBP3.12□□□□□ -1.91
YGR109W-AYGR109W-A NUP133P36161 1157 aa3.12□□□□□ -1.91
YGR109W-AYGR109W-A YPI1P43587 155 aa3.12□□□□□ -1.91
YGR109W-AYGR109W-A SNG1P46950 547 aa3.12□□□□□ -1.91
YGR109W-AYGR109W-A DUO1P53168 247 aaKnown RBP3.12□□□□□ -1.91
YGR109W-AYGR109W-A BUD32P53323 261 aa3.12□□□□□ -1.91
YGR109W-AYGR109W-A SHR3Q02774 210 aa3.12□□□□□ -1.91
YGR109W-AYGR109W-A MSC1Q03104 513 aa3.12□□□□□ -1.91
YGR109W-AYGR109W-A RLI1Q03195 608 aaKnown RBP3.12□□□□□ -1.91
YGR109W-AYGR109W-A NGL3Q03210 505 aa3.12□□□□□ -1.91
YGR109W-AYGR109W-A SYO1Q07395 620 aa3.12□□□□□ -1.91
YGR109W-AYGR109W-A YPL272CQ08984 517 aa3.12□□□□□ -1.91
YGR109W-AYGR109W-A SPE4Q12455 300 aa3.12□□□□□ -1.91
YGR109W-AYGR109W-A HEM2P05373 342 aa3.11□□□□□ -1.91
YGR109W-AYGR109W-A REV1P12689 985 aa3.11□□□□□ -1.91
YGR109W-AYGR109W-A AMD1P15274 810 aaKnown RBP3.11□□□□□ -1.91
YGR109W-AYGR109W-A POL4P25615 582 aa3.11□□□□□ -1.91
YGR109W-AYGR109W-A YCR022CP25620 114 aa3.11□□□□□ -1.91
YGR109W-AYGR109W-A IMG1P25626 169 aa3.11□□□□□ -1.91
YGR109W-AYGR109W-A RPL32P38061 130 aaKnown RBP3.11□□□□□ -1.91
YGR109W-AYGR109W-A ICS2P38284 255 aa3.11□□□□□ -1.91
YGR109W-AYGR109W-A TIF5P38431 405 aaKnown RBP3.11□□□□□ -1.91
YGR109W-AYGR109W-A SPG5P42933 373 aa3.11□□□□□ -1.91
YGR109W-AYGR109W-A FAR3P46671 204 aa3.11□□□□□ -1.91
YGR109W-AYGR109W-A YGR127WP53275 312 aa3.11□□□□□ -1.91
YGR109W-AYGR109W-A BUD21Q08492 214 aaPredicted RBP3.11□□□□□ -1.91
YGR109W-AYGR109W-A YBR126W-AQ8TGU7 68 aa3.11□□□□□ -1.91
YGR109W-AYGR109W-A CAR1P00812 333 aaKnown RBP3.1□□□□□ -1.91
YGR109W-AYGR109W-A ARD1P07347 238 aaPredicted RBP3.1□□□□□ -1.91
YGR109W-AYGR109W-A AAC3P18238 307 aa3.1□□□□□ -1.91
YGR109W-AYGR109W-A PRE8P23639 250 aa3.1□□□□□ -1.91
YGR109W-AYGR109W-A GFD2P25370 566 aaKnown RBP3.1□□□□□ -1.91
YGR109W-AYGR109W-A PAH1P32567 862 aa3.1□□□□□ -1.91
YGR109W-AYGR109W-A YKL023WP36103 277 aaKnown RBP3.1□□□□□ -1.91
YGR109W-AYGR109W-A NPR2P39923 615 aa3.1□□□□□ -1.91
YGR109W-AYGR109W-A IDP2P41939 412 aa3.1□□□□□ -1.91
YGR109W-AYGR109W-A UPF3P48412 387 aaKnown RBP3.1□□□□□ -1.91
YGR109W-AYGR109W-A ALT2P52892 507 aa3.1□□□□□ -1.91
YGR109W-AYGR109W-A DSD1P53095 428 aa3.1□□□□□ -1.91
YGR109W-AYGR109W-A NCE102Q12207 173 aaRIP-Chip data3.1□□□□□ -1.91not detected
YGR109W-AYGR109W-A YDL009CQ12210 107 aa3.1□□□□□ -1.91
YGR109W-AYGR109W-A ENT1Q12518 454 aa3.1□□□□□ -1.91
YGR109W-AYGR109W-A SGF29P25554 259 aa3.09□□□□□ -1.91
YGR109W-AYGR109W-A PMU1P36069 295 aa3.09□□□□□ -1.91
YGR109W-AYGR109W-A YBL029WP38201 376 aa3.09□□□□□ -1.91
YGR109W-AYGR109W-A YBP1P38315 674 aa3.09□□□□□ -1.91
YGR109W-AYGR109W-A SCD6P45978 349 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
YGR109W-AYGR109W-A APT1P49435 187 aaKnown RBP3.09□□□□□ -1.91
YGR109W-AYGR109W-A BNA5Q05979 453 aa3.09□□□□□ -1.91
YGR109W-AYGR109W-A YDL121CQ07541 149 aa3.09□□□□□ -1.91
YGR109W-AYGR109W-A MF(ALPHA)1P01149 165 aa3.08□□□□□ -1.92
YGR109W-AYGR109W-A SSE2P32590 693 aaKnown RBP3.08□□□□□ -1.92
YGR109W-AYGR109W-A SAC6P32599 642 aaKnown RBP3.08□□□□□ -1.92
YGR109W-AYGR109W-A FRE1P32791 686 aa3.08□□□□□ -1.92
YGR109W-AYGR109W-A YBR144CP34215 104 aa3.08□□□□□ -1.92
YGR109W-AYGR109W-A SWH1P35845 1188 aa3.08□□□□□ -1.92
YGR109W-AYGR109W-A TUL1P36096 758 aa3.08□□□□□ -1.92
YGR109W-AYGR109W-A NOP16P40007 231 aaKnown RBP3.08□□□□□ -1.92
YGR109W-AYGR109W-A SHO1P40073 367 aa3.08□□□□□ -1.92
YGR109W-AYGR109W-A YJR154WP47181 346 aa3.08□□□□□ -1.92
YGR109W-AYGR109W-A DRN1P53255 507 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms