RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W IKS1P47042 667 aa1.59□□□□□ -2.16
YCK3YER123W ARC35P53731 342 aaKnown RBP1.59□□□□□ -2.16
YCK3YER123W TDA7P53882 636 aaPredicted RBP1.59□□□□□ -2.16
YCK3YER123W HCR1Q05775 265 aaKnown RBP1.59□□□□□ -2.16
YCK3YER123W ADE13Q05911 482 aaKnown RBP1.59□□□□□ -2.16
YCK3YER123W ATG9Q12142 997 aa1.59□□□□□ -2.16
YCK3YER123W NYV1Q12255 253 aa1.59□□□□□ -2.16
YCK3YER123W PCD1Q12524 340 aa1.59□□□□□ -2.16
YCK3YER123W IRA2P19158 3079 aa1.58□□□□□ -2.16
YCK3YER123W GDH1P07262 454 aaKnown RBP1.58□□□□□ -2.16
YCK3YER123W NUC1P08466 329 aa1.58□□□□□ -2.16
YCK3YER123W MTF2P10849 440 aa1.58□□□□□ -2.16
YCK3YER123W MSM1P22438 575 aa1.58□□□□□ -2.16
YCK3YER123W LOS1P33418 1100 aaPredicted RBP1.58□□□□□ -2.16
YCK3YER123W YNK1P36010 153 aaKnown RBP1.58□□□□□ -2.16
YCK3YER123W ARP1P38696 384 aa1.58□□□□□ -2.16
YCK3YER123W NPR2P39923 615 aa1.58□□□□□ -2.16
YCK3YER123W AXL1P40851 1208 aa1.58□□□□□ -2.16
YCK3YER123W YJL213WP40896 331 aa1.58□□□□□ -2.16
YCK3YER123W EAF6P47128 113 aa1.58□□□□□ -2.16
YCK3YER123W YGL082WP53155 381 aa1.58□□□□□ -2.16
YCK3YER123W REG1Q00816 1014 aa1.58□□□□□ -2.16
YCK3YER123W MRPL13Q02204 264 aa1.58□□□□□ -2.16
YCK3YER123W RBA50Q04418 439 aa1.58□□□□□ -2.16
YCK3YER123W PAL1Q05518 499 aaKnown RBP1.58□□□□□ -2.16
YCK3YER123W YOL159CQ08300 171 aa1.58□□□□□ -2.16
YCK3YER123W INP53Q12271 1107 aa1.58□□□□□ -2.16
YCK3YER123W YOR019WQ99248 730 aa1.58□□□□□ -2.16
YCK3YER123W SRB8P25648 1427 aa1.57□□□□□ -2.16
YCK3YER123W RPL15AP05748 204 aaKnown RBP1.57□□□□□ -2.16
YCK3YER123W SPE2P21182 396 aa1.57□□□□□ -2.16
YCK3YER123W UBC1P21734 215 aaKnown RBP1.57□□□□□ -2.16
YCK3YER123W PGS1P25578 521 aa1.57□□□□□ -2.16
YCK3YER123W CMK1P27466 446 aaKnown RBP1.57□□□□□ -2.16
YCK3YER123W MSN2P33748 704 aa1.57□□□□□ -2.16
YCK3YER123W TOM20P35180 183 aa1.57□□□□□ -2.16
YCK3YER123W IFA38P38286 347 aa1.57□□□□□ -2.16
YCK3YER123W UBA4P38820 440 aa1.57□□□□□ -2.16
YCK3YER123W UIP3P39547 235 aa1.57□□□□□ -2.16
YCK3YER123W RPH1P39956 796 aa1.57□□□□□ -2.16
YCK3YER123W YTA12P40341 825 aa1.57□□□□□ -2.16
YCK3YER123W RTT101P47050 842 aa1.57□□□□□ -2.16
YCK3YER123W RPM2Q02773 1202 aa1.57□□□□□ -2.16
YCK3YER123W CIA1Q05583 330 aa1.57□□□□□ -2.16
YCK3YER123W SSK1Q07084 712 aa1.57□□□□□ -2.16
YCK3YER123W CDC45Q08032 650 aa1.57□□□□□ -2.16
YCK3YER123W SET6Q12529 373 aa1.57□□□□□ -2.16
YCK3YER123W SNF3P10870 884 aa1.56□□□□□ -2.16
YCK3YER123W MTF1P14908 341 aaKnown RBP1.56□□□□□ -2.16
YCK3YER123W ERG8P24521 451 aa1.56□□□□□ -2.16
YCK3YER123W SNC1P31109 117 aa1.56□□□□□ -2.16
YCK3YER123W AGA1P32323 725 aa1.56□□□□□ -2.16
YCK3YER123W PTR2P32901 601 aa1.56□□□□□ -2.16
YCK3YER123W VPS17P32913 551 aa1.56□□□□□ -2.16
YCK3YER123W SNU114P36048 1008 aaKnown RBP1.56□□□□□ -2.16
YCK3YER123W ANS1P38832 159 aa1.56□□□□□ -2.16
YCK3YER123W ACA1P39970 489 aa1.56□□□□□ -2.16
YCK3YER123W YGL039WP53183 348 aaKnown RBP1.56□□□□□ -2.16
YCK3YER123W YNR061CP53747 219 aa1.56□□□□□ -2.16
YCK3YER123W ZDS2P54786 942 aa1.56□□□□□ -2.16
YCK3YER123W ERP1Q05359 219 aaKnown RBP1.56□□□□□ -2.16
YCK3YER123W BLS1Q06071 122 aa1.56□□□□□ -2.16
YCK3YER123W PSK2Q08217 1101 aa1.56□□□□□ -2.16
YCK3YER123W YIL177CP40434 1758 aa1.56□□□□□ -2.16
YCK3YER123W YJL225CP40889 1758 aa1.56□□□□□ -2.16
YCK3YER123W YBR085C-AO43137 85 aa1.55□□□□□ -2.16
YCK3YER123W PFK2P16862 959 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
YCK3YER123W SEC62P21825 274 aa1.55□□□□□ -2.16
YCK3YER123W NDC1P32500 655 aa1.55□□□□□ -2.16
YCK3YER123W PRS1P32895 427 aaKnown RBP1.55□□□□□ -2.16
YCK3YER123W ECM15P35195 104 aa1.55□□□□□ -2.16
YCK3YER123W TEF4P36008 412 aaKnown RBP1.55□□□□□ -2.16
YCK3YER123W DBP8P38719 431 aa1.55□□□□□ -2.16
YCK3YER123W SEC24P40482 926 aaKnown RBP1.55□□□□□ -2.16
YCK3YER123W IME4P41833 600 aa1.55□□□□□ -2.16
YCK3YER123W YFR016CP43597 1233 aaKnown RBP1.55□□□□□ -2.16
YCK3YER123W VPS4P52917 437 aa1.55□□□□□ -2.16
YCK3YER123W COS10P52924 374 aa1.55□□□□□ -2.16
YCK3YER123W STR3P53101 465 aaKnown RBP1.55□□□□□ -2.16
YCK3YER123W YMR160WQ03823 816 aa1.55□□□□□ -2.16
YCK3YER123W TFC6Q06339 672 aa1.55□□□□□ -2.16
YCK3YER123W THI20Q08224 551 aa1.55□□□□□ -2.16
YCK3YER123W NUS1Q12063 375 aa1.55□□□□□ -2.16
YCK3YER123W PDH1Q12428 516 aaKnown RBP1.55□□□□□ -2.16
YCK3YER123W RSF2P46974 1380 aa1.55□□□□□ -2.16
YCK3YER123W FAS2P19097 1887 aaKnown RBP1.55□□□□□ -2.16
YCK3YER123W YLR302CO13544 120 aa1.55□□□□□ -2.16
YCK3YER123W ARG81P05085 880 aa1.55□□□□□ -2.16
YCK3YER123W PUT2P07275 575 aa1.55□□□□□ -2.16
YCK3YER123W APA1P16550 321 aaKnown RBP1.55□□□□□ -2.16
YCK3YER123W MCK1P21965 375 aaKnown RBP1.55□□□□□ -2.16
YCK3YER123W ATS1P31386 333 aa1.55□□□□□ -2.16
YCK3YER123W XRS2P33301 854 aa1.55□□□□□ -2.16
YCK3YER123W CNS1P33313 385 aa1.55□□□□□ -2.16
YCK3YER123W AGP2P38090 596 aa1.55□□□□□ -2.16
YCK3YER123W ROT2P38138 954 aa1.55□□□□□ -2.16
YCK3YER123W LAG1P38703 411 aa1.55□□□□□ -2.16
YCK3YER123W DIA4P38705 446 aaPredicted RBP1.55□□□□□ -2.16
YCK3YER123W PSD1P39006 500 aa1.55□□□□□ -2.16
YCK3YER123W RIC1P40395 1056 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms