RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	EAP1	P36041	632 aa	Known RBP	6.34	□□□□□ -1.39
VMA3	YEL027W	RPF2	P36160	344 aa	Known RBP	6.34	□□□□□ -1.39
VMA3	YEL027W	UTP9	P38882	575 aa	Known RBP	6.34	□□□□□ -1.39
VMA3	YEL027W	SHU2	P38957	223 aa		6.34	□□□□□ -1.39
VMA3	YEL027W	YER034W	P40022	185 aa	Known RBP	6.34	□□□□□ -1.39
VMA3	YEL027W	YRB1	P41920	201 aa	Known RBP	6.34	□□□□□ -1.39
VMA3	YEL027W	UBP6	P43593	499 aa	Known RBP	6.34	□□□□□ -1.39
VMA3	YEL027W	SHY1	P53266	389 aa		6.34	□□□□□ -1.39
VMA3	YEL027W	GTR2	P53290	341 aa		6.34	□□□□□ -1.39
VMA3	YEL027W	NOP19	P53317	196 aa	Predicted RBP	6.34	□□□□□ -1.39
VMA3	YEL027W	ZRG17	P53735	605 aa		6.34	□□□□□ -1.39
VMA3	YEL027W	BCH1	Q05029	724 aa		6.34	□□□□□ -1.39
VMA3	YEL027W	PLB3	Q08108	686 aa		6.34	□□□□□ -1.39
VMA3	YEL027W	YPL225W	Q08971	146 aa	Known RBP	6.34	□□□□□ -1.39
VMA3	YEL027W	NHA1	Q99271	985 aa		6.34	□□□□□ -1.39
VMA3	YEL027W	GAL4	P04386	881 aa		6.33	□□□□□ -1.4
VMA3	YEL027W	MET8	P15807	274 aa		6.33	□□□□□ -1.4
VMA3	YEL027W	PRP16	P15938	1071 aa	Predicted RBP	6.33	□□□□□ -1.4
VMA3	YEL027W	PRP4	P20053	465 aa	Known RBP	6.33	□□□□□ -1.4
VMA3	YEL027W	SCL1	P21243	252 aa	Known RBP	6.33	□□□□□ -1.4
VMA3	YEL027W	VPS34	P22543	875 aa		6.33	□□□□□ -1.4
VMA3	YEL027W	YSR3	P23501	404 aa		6.33	□□□□□ -1.4
VMA3	YEL027W	TOA1	P32773	286 aa		6.33	□□□□□ -1.4
VMA3	YEL027W	SWH1	P35845	1188 aa		6.33	□□□□□ -1.4
VMA3	YEL027W	RIM11	P38615	370 aa		6.33	□□□□□ -1.4
VMA3	YEL027W	DHH1	P39517	506 aa	Known RBP	6.33	□□□□□ -1.4
VMA3	YEL027W	NPT1	P39683	429 aa	Known RBP	6.33	□□□□□ -1.4
VMA3	YEL027W	LSM5	P40089	93 aa	Known RBP	6.33	□□□□□ -1.4
VMA3	YEL027W	YER158C	P40095	573 aa		6.33	□□□□□ -1.4
VMA3	YEL027W	RNR4	P49723	345 aa	Known RBP	6.33	□□□□□ -1.4
VMA3	YEL027W	MPS2	P53159	387 aa		6.33	□□□□□ -1.4
VMA3	YEL027W	HST3	P53687	447 aa		6.33	□□□□□ -1.4
VMA3	YEL027W	YPL109C	Q02981	657 aa		6.33	□□□□□ -1.4
VMA3	YEL027W	YML131W	Q03102	365 aa		6.33	□□□□□ -1.4
VMA3	YEL027W	FMN1	Q03778	218 aa		6.33	□□□□□ -1.4
VMA3	YEL027W	RIF2	Q06208	395 aa		6.33	□□□□□ -1.4
VMA3	YEL027W	YDL121C	Q07541	149 aa		6.33	□□□□□ -1.4
VMA3	YEL027W	RIB2	Q12362	591 aa	Known RBP	6.33	□□□□□ -1.4
VMA3	YEL027W	RRP36	Q12481	300 aa	Predicted RBP	6.33	□□□□□ -1.4
VMA3	YEL027W	CAR1	P00812	333 aa	Known RBP	6.32	□□□□□ -1.4
VMA3	YEL027W	CDC21	P06785	304 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	SPT3	P06844	337 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	GUK1	P15454	187 aa	Known RBP	6.32	□□□□□ -1.4
VMA3	YEL027W	TEC1	P18412	486 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	CWP1	P28319	239 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	CRM1	P30822	1084 aa	Known RBP	6.32	□□□□□ -1.4
VMA3	YEL027W	PDR3	P33200	976 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	RPS1A	P33442	255 aa	Known RBP	6.32	□□□□□ -1.4
VMA3	YEL027W	GIC1	P38785	314 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	ERP5	P38819	212 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	UBA4	P38820	440 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	YAL037W	P39728	267 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	YEL073C	P39974	107 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	SPF1	P39986	1215 aa	Known RBP	6.32	□□□□□ -1.4
VMA3	YEL027W	GIM4	P40005	111 aa	Known RBP	6.32	□□□□□ -1.4
VMA3	YEL027W	SCS2	P40075	244 aa	Known RBP	6.32	□□□□□ -1.4
VMA3	YEL027W	EMP65	P40085	556 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	UTP18	P40362	594 aa	Predicted RBP	6.32	□□□□□ -1.4
VMA3	YEL027W	VMA13	P41807	478 aa	Known RBP	6.32	□□□□□ -1.4
VMA3	YEL027W	ZIM17	P42844	174 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	TIS11	P47977	285 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	UBP2	Q01476	1272 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	EGD1	Q02642	157 aa	Known RBP	6.32	□□□□□ -1.4
VMA3	YEL027W	LGE1	Q02796	332 aa	Known RBP	6.32	□□□□□ -1.4
VMA3	YEL027W	GAS3	Q03655	524 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	SPC24	Q04477	213 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	ATG34	Q12292	412 aa		6.32	□□□□□ -1.4
VMA3	YEL027W	BRR2	P32639	2163 aa	Known RBP	6.32	□□□□□ -1.4
VMA3	YEL027W	FUM1	P08417	488 aa	Known RBP	6.31	□□□□□ -1.4
VMA3	YEL027W	YCK2	P23292	546 aa	Known RBP	6.31	□□□□□ -1.4
VMA3	YEL027W	MVD1	P32377	396 aa	Known RBP	6.31	□□□□□ -1.4
VMA3	YEL027W	ATP11	P32453	318 aa		6.31	□□□□□ -1.4
VMA3	YEL027W	COX13	P32799	129 aa		6.31	□□□□□ -1.4
VMA3	YEL027W	PIM1	P36775	1133 aa		6.31	□□□□□ -1.4
VMA3	YEL027W	RFC3	P38629	340 aa		6.31	□□□□□ -1.4
VMA3	YEL027W	STS1	P38637	319 aa		6.31	□□□□□ -1.4
VMA3	YEL027W	DED81	P38707	554 aa	Known RBP	6.31	□□□□□ -1.4
VMA3	YEL027W	FRT2	P39734	528 aa		6.31	□□□□□ -1.4
VMA3	YEL027W	HXT16	P47185	567 aa		6.31	□□□□□ -1.4
VMA3	YEL027W	CUS2	P53830	285 aa	Predicted RBP	6.31	□□□□□ -1.4
VMA3	YEL027W	BNI4	P53858	892 aa		6.31	□□□□□ -1.4
VMA3	YEL027W	YNL010W	P53981	241 aa	Known RBP	6.31	□□□□□ -1.4
VMA3	YEL027W	HXT15	P54854	567 aa		6.31	□□□□□ -1.4
VMA3	YEL027W	GPB1	Q08886	897 aa		6.31	□□□□□ -1.4
VMA3	YEL027W	PST1	Q12355	444 aa		6.31	□□□□□ -1.4
VMA3	YEL027W	STE3	P06783	470 aa		6.3	□□□□□ -1.4
VMA3	YEL027W	CLN2	P20438	545 aa		6.3	□□□□□ -1.4
VMA3	YEL027W	ARG1	P22768	420 aa		6.3	□□□□□ -1.4
VMA3	YEL027W	BUB2	P26448	306 aa	Predicted RBP	6.3	□□□□□ -1.4
VMA3	YEL027W	SDH3	P33421	198 aa		6.3	□□□□□ -1.4
VMA3	YEL027W	SIP2	P34164	415 aa	Known RBP	6.3	□□□□□ -1.4
VMA3	YEL027W	ARN1	P38731	627 aa		6.3	□□□□□ -1.4
VMA3	YEL027W	CEM1	P39525	442 aa		6.3	□□□□□ -1.4
VMA3	YEL027W	YEN1	P40028	759 aa		6.3	□□□□□ -1.4
VMA3	YEL027W	MET18	P40469	1032 aa		6.3	□□□□□ -1.4
VMA3	YEL027W	GCD10	P41814	478 aa		6.3	□□□□□ -1.4
VMA3	YEL027W	PFA3	P42836	336 aa		6.3	□□□□□ -1.4
VMA3	YEL027W	CCT7	P42943	550 aa	Known RBP	6.3	□□□□□ -1.4
VMA3	YEL027W	STB2	P46679	850 aa		6.3	□□□□□ -1.4
VMA3	YEL027W	YJR154W	P47181	346 aa		6.3	□□□□□ -1.4

Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms