RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A SSE2P32590 693 aaKnown RBP3.55□□□□□ -1.84
YDR261W-AYDR261W-A YBR144CP34215 104 aa3.55□□□□□ -1.84
YDR261W-AYDR261W-A UBP11P36026 717 aa3.55□□□□□ -1.84
YDR261W-AYDR261W-A YKL023WP36103 277 aaKnown RBP3.55□□□□□ -1.84
YDR261W-AYDR261W-A YHR218WP38899 603 aa3.55□□□□□ -1.84
YDR261W-AYDR261W-A YEL068CP39977 110 aa3.55□□□□□ -1.84
YDR261W-AYDR261W-A SNG1P46950 547 aa3.55□□□□□ -1.84
YDR261W-AYDR261W-A THI20Q08224 551 aa3.55□□□□□ -1.84
YDR261W-AYDR261W-A RPL15AP05748 204 aaKnown RBP3.54□□□□□ -1.84
YDR261W-AYDR261W-A RPL19AP0CX82 189 aaKnown RBP3.54□□□□□ -1.84
YDR261W-AYDR261W-A RPL19BP0CX83 189 aaPredicted RBP3.54□□□□□ -1.84
YDR261W-AYDR261W-A PEP5P12868 1029 aa3.54□□□□□ -1.84
YDR261W-AYDR261W-A MTF1P14908 341 aaKnown RBP3.54□□□□□ -1.84
YDR261W-AYDR261W-A BUD14P27637 709 aa3.54□□□□□ -1.84
YDR261W-AYDR261W-A SYN8P31377 255 aa3.54□□□□□ -1.84
YDR261W-AYDR261W-A PTR2P32901 601 aa3.54□□□□□ -1.84
YDR261W-AYDR261W-A NUP133P36161 1157 aa3.54□□□□□ -1.84
YDR261W-AYDR261W-A ROK1P45818 564 aaPredicted RBP3.54□□□□□ -1.84
YDR261W-AYDR261W-A YGR126WP53274 230 aa3.54□□□□□ -1.84
YDR261W-AYDR261W-A RHO4Q00246 291 aa3.54□□□□□ -1.84
YDR261W-AYDR261W-A LUC7Q07508 261 aaPredicted RBP3.54□□□□□ -1.84
YDR261W-AYDR261W-A FMP40Q08968 688 aaPredicted RBP3.54□□□□□ -1.84
YDR261W-AYDR261W-A CDC16P09798 840 aa3.53□□□□□ -1.84
YDR261W-AYDR261W-A SGF29P25554 259 aa3.53□□□□□ -1.84
YDR261W-AYDR261W-A NDC1P32500 655 aa3.53□□□□□ -1.84
YDR261W-AYDR261W-A LCL3P53153 274 aa3.53□□□□□ -1.84
YDR261W-AYDR261W-A YDL057WQ07379 328 aa3.53□□□□□ -1.84
YDR261W-AYDR261W-A CAR1P00812 333 aaKnown RBP3.52□□□□□ -1.85
YDR261W-AYDR261W-A APE1P14904 514 aa3.52□□□□□ -1.85
YDR261W-AYDR261W-A CPR3P25719 182 aa3.52□□□□□ -1.85
YDR261W-AYDR261W-A SIP2P34164 415 aaKnown RBP3.52□□□□□ -1.85
YDR261W-AYDR261W-A YBR139WP38109 508 aa3.52□□□□□ -1.85
YDR261W-AYDR261W-A CIN4P39110 191 aa3.52□□□□□ -1.85
YDR261W-AYDR261W-A CSM2P40465 213 aa3.52□□□□□ -1.85
YDR261W-AYDR261W-A RPR2P40571 144 aa3.52□□□□□ -1.85
YDR261W-AYDR261W-A RTT101P47050 842 aa3.52□□□□□ -1.85
YDR261W-AYDR261W-A YDL186WP48568 277 aa3.52□□□□□ -1.85
YDR261W-AYDR261W-A ALT2P52892 507 aa3.52□□□□□ -1.85
YDR261W-AYDR261W-A DSD1P53095 428 aa3.52□□□□□ -1.85
YDR261W-AYDR261W-A DUO1P53168 247 aaKnown RBP3.52□□□□□ -1.85
YDR261W-AYDR261W-A TLG2Q08144 397 aa3.52□□□□□ -1.85
YDR261W-AYDR261W-A NOP58Q12499 511 aaKnown RBP3.52□□□□□ -1.85
YDR261W-AYDR261W-A SET6Q12529 373 aa3.52□□□□□ -1.85
YDR261W-AYDR261W-A GDH1P07262 454 aaKnown RBP3.51□□□□□ -1.85
YDR261W-AYDR261W-A MUD2P36084 527 aaKnown RBP3.51□□□□□ -1.85
YDR261W-AYDR261W-A SDS24P38314 527 aa3.51□□□□□ -1.85
YDR261W-AYDR261W-A OSH3P38713 996 aaKnown RBP3.51□□□□□ -1.85
YDR261W-AYDR261W-A RPH1P39956 796 aa3.51□□□□□ -1.85
YDR261W-AYDR261W-A YFR016CP43597 1233 aaKnown RBP3.51□□□□□ -1.85
YDR261W-AYDR261W-A COS10P52924 374 aa3.51□□□□□ -1.85
YDR261W-AYDR261W-A BUD32P53323 261 aa3.51□□□□□ -1.85
YDR261W-AYDR261W-A MSC1Q03104 513 aa3.51□□□□□ -1.85
YDR261W-AYDR261W-A YPL272CQ08984 517 aa3.51□□□□□ -1.85
YDR261W-AYDR261W-A SPE4Q12455 300 aa3.51□□□□□ -1.85
YDR261W-AYDR261W-A ENT1Q12518 454 aa3.51□□□□□ -1.85
YDR261W-AYDR261W-A KAR3P17119 729 aa3.5□□□□□ -1.85
YDR261W-AYDR261W-A EST1P17214 699 aaPredicted RBP3.5□□□□□ -1.85
YDR261W-AYDR261W-A ART10P18634 518 aaKnown RBP3.5□□□□□ -1.85
YDR261W-AYDR261W-A MCK1P21965 375 aaKnown RBP3.5□□□□□ -1.85
YDR261W-AYDR261W-A AGA1P32323 725 aa3.5□□□□□ -1.85
YDR261W-AYDR261W-A VPS52P39904 641 aa3.5□□□□□ -1.85
YDR261W-AYDR261W-A YJL213WP40896 331 aa3.5□□□□□ -1.85
YDR261W-AYDR261W-A APT1P49435 187 aaKnown RBP3.5□□□□□ -1.85
YDR261W-AYDR261W-A BOR1P53838 576 aa3.5□□□□□ -1.85
YDR261W-AYDR261W-A ERP1Q05359 219 aaKnown RBP3.5□□□□□ -1.85
YDR261W-AYDR261W-A SGS1P35187 1447 aa3.5□□□□□ -1.85
YDR261W-AYDR261W-A SEC53P07283 254 aaKnown RBP3.49□□□□□ -1.85
YDR261W-AYDR261W-A SPC110P32380 944 aa3.49□□□□□ -1.85
YDR261W-AYDR261W-A SEF1P34228 1148 aa3.49□□□□□ -1.85
YDR261W-AYDR261W-A YBP1P38315 674 aa3.49□□□□□ -1.85
YDR261W-AYDR261W-A NPR2P39923 615 aa3.49□□□□□ -1.85
YDR261W-AYDR261W-A VID30P53076 958 aa3.49□□□□□ -1.85
YDR261W-AYDR261W-A IPI3P53877 555 aa3.49□□□□□ -1.85
YDR261W-AYDR261W-A RSA1Q08932 381 aa3.49□□□□□ -1.85
YDR261W-AYDR261W-A MRP13P12686 339 aa3.48□□□□□ -1.85
YDR261W-AYDR261W-A MTC4P38335 694 aaKnown RBP3.48□□□□□ -1.85
YDR261W-AYDR261W-A YHR210CP38893 341 aa3.48□□□□□ -1.85
YDR261W-AYDR261W-A VID27P40157 782 aa3.48□□□□□ -1.85
YDR261W-AYDR261W-A ALG5P40350 334 aa3.48□□□□□ -1.85
YDR261W-AYDR261W-A YKU80Q04437 629 aa3.48□□□□□ -1.85
YDR261W-AYDR261W-A NCE102Q12207 173 aaRIP-Chip data3.48□□□□□ -1.85not detected
YDR261W-AYDR261W-A AYT1Q12226 474 aa3.48□□□□□ -1.85
YDR261W-AYDR261W-A RPL20AP0CX23 172 aaKnown RBP3.47□□□□□ -1.85
YDR261W-AYDR261W-A RPL20BP0CX24 172 aaPredicted RBP3.47□□□□□ -1.85
YDR261W-AYDR261W-A AMD1P15274 810 aaKnown RBP3.47□□□□□ -1.85
YDR261W-AYDR261W-A NOP1P15646 327 aaKnown RBP3.47□□□□□ -1.85
YDR261W-AYDR261W-A YCR022CP25620 114 aa3.47□□□□□ -1.85
YDR261W-AYDR261W-A SAC6P32599 642 aaKnown RBP3.47□□□□□ -1.85
YDR261W-AYDR261W-A AVT5P38176 459 aa3.47□□□□□ -1.85
YDR261W-AYDR261W-A FLC2P39719 783 aa3.47□□□□□ -1.85
YDR261W-AYDR261W-A SCD6P45978 349 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
YDR261W-AYDR261W-A YJR154WP47181 346 aa3.47□□□□□ -1.85
YDR261W-AYDR261W-A RBG2P53295 368 aaKnown RBP3.47□□□□□ -1.85
YDR261W-AYDR261W-A RLI1Q03195 608 aaKnown RBP3.47□□□□□ -1.85
YDR261W-AYDR261W-A NGL3Q03210 505 aa3.47□□□□□ -1.85
YDR261W-AYDR261W-A IVY1Q04934 453 aa3.47□□□□□ -1.85
YDR261W-AYDR261W-A MRPL51Q06090 140 aaPredicted RBP3.47□□□□□ -1.85
YDR261W-AYDR261W-A SYO1Q07395 620 aa3.47□□□□□ -1.85
YDR261W-AYDR261W-A YEH1Q07804 573 aa3.47□□□□□ -1.85
YDR261W-AYDR261W-A YDL009CQ12210 107 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms