RNA–Protein interactions for RNA: YDR118W

APC4, Transcript of Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), yeast

Gene APC4, Length 1,959 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC4	YDR118W	VPS34	P22543	875 aa		4.56	□□□□□ -1.68
APC4	YDR118W	PTC1	P35182	281 aa		4.56	□□□□□ -1.68
APC4	YDR118W	SSN3	P39073	555 aa		4.56	□□□□□ -1.68
APC4	YDR118W	ECM1	P39715	212 aa		4.56	□□□□□ -1.68
APC4	YDR118W	RLP7	P40693	322 aa	Known RBP	4.56	□□□□□ -1.68
APC4	YDR118W	GAT1	P43574	510 aa		4.56	□□□□□ -1.68
APC4	YDR118W	NUP84	P52891	726 aa		4.56	□□□□□ -1.68
APC4	YDR118W	GPG1	P53130	126 aa		4.56	□□□□□ -1.68
APC4	YDR118W	NPY1	P53164	384 aa		4.56	□□□□□ -1.68
APC4	YDR118W	GAS3	Q03655	524 aa		4.56	□□□□□ -1.68
APC4	YDR118W	RSC3	Q06639	885 aa		4.56	□□□□□ -1.68
APC4	YDR118W	YPR202W	Q08993	238 aa		4.56	□□□□□ -1.68
APC4	YDR118W	GNT1	Q12096	491 aa		4.56	□□□□□ -1.68
APC4	YDR118W	YLR049C	Q12110	428 aa		4.56	□□□□□ -1.68
APC4	YDR118W	ATG34	Q12292	412 aa		4.56	□□□□□ -1.68
APC4	YDR118W	CET1	O13297	549 aa	Predicted RBP	4.56	□□□□□ -1.68
APC4	YDR118W	PHO5	P00635	467 aa		4.56	□□□□□ -1.68
APC4	YDR118W	SUC2	P00724	532 aa		4.56	□□□□□ -1.68
APC4	YDR118W	CYT1	P07143	309 aa		4.56	□□□□□ -1.68
APC4	YDR118W	COS2	P0CX12	379 aa		4.56	□□□□□ -1.68
APC4	YDR118W	COS3	P0CX13	379 aa		4.56	□□□□□ -1.68
APC4	YDR118W	YAR066W	P0CX18	203 aa		4.56	□□□□□ -1.68
APC4	YDR118W	YHR214W	P0CX19	203 aa		4.56	□□□□□ -1.68
APC4	YDR118W	GUK1	P15454	187 aa	Known RBP	4.56	□□□□□ -1.68
APC4	YDR118W	BUB2	P26448	306 aa	Predicted RBP	4.56	□□□□□ -1.68
APC4	YDR118W	YKL100C	P34248	587 aa		4.56	□□□□□ -1.68
APC4	YDR118W	ARN1	P38731	627 aa		4.56	□□□□□ -1.68
APC4	YDR118W	HSE1	P38753	452 aa		4.56	□□□□□ -1.68
APC4	YDR118W	TRM5	P38793	499 aa		4.56	□□□□□ -1.68
APC4	YDR118W	CYC2	P38909	366 aa		4.56	□□□□□ -1.68
APC4	YDR118W	GDH3	P39708	457 aa		4.56	□□□□□ -1.68
APC4	YDR118W	UTP18	P40362	594 aa	Predicted RBP	4.56	□□□□□ -1.68
APC4	YDR118W	GPP1	P41277	250 aa	Known RBP	4.56	□□□□□ -1.68
APC4	YDR118W	CCT7	P42943	550 aa	Known RBP	4.56	□□□□□ -1.68
APC4	YDR118W	COS4	P43542	379 aa		4.56	□□□□□ -1.68
APC4	YDR118W	YNR061C	P53747	219 aa		4.56	□□□□□ -1.68
APC4	YDR118W	YDR476C	Q03362	224 aa		4.56	□□□□□ -1.68
APC4	YDR118W	CCE1	Q03702	353 aa		4.56	□□□□□ -1.68
APC4	YDR118W	YEH2	Q07950	538 aa		4.56	□□□□□ -1.68
APC4	YDR118W	MCD1	Q12158	566 aa		4.56	□□□□□ -1.68
APC4	YDR118W	CMR1	Q12510	522 aa	Known RBP	4.56	□□□□□ -1.68
APC4	YDR118W	TMA7	Q3E764	64 aa	Known RBP	4.56	□□□□□ -1.68
APC4	YDR118W	HSH49	Q99181	213 aa	Predicted RBP	4.56	□□□□□ -1.68
APC4	YDR118W	RPS9A	O13516	197 aa	Known RBP	4.55	□□□□□ -1.68
APC4	YDR118W	CDC21	P06785	304 aa		4.55	□□□□□ -1.68
APC4	YDR118W	COX13	P32799	129 aa		4.55	□□□□□ -1.68
APC4	YDR118W	YPT52	P36018	234 aa	Known RBP	4.55	□□□□□ -1.68
APC4	YDR118W	YBL029W	P38201	376 aa		4.55	□□□□□ -1.68
APC4	YDR118W	IML3	P38265	245 aa		4.55	□□□□□ -1.68
APC4	YDR118W	YBR184W	P38299	523 aa		4.55	□□□□□ -1.68
APC4	YDR118W	TAE1	P38340	232 aa		4.55	□□□□□ -1.68
APC4	YDR118W	NPT1	P39683	429 aa	Known RBP	4.55	□□□□□ -1.68
APC4	YDR118W	ARB1	P40024	610 aa	Known RBP	4.55	□□□□□ -1.68
APC4	YDR118W	ALG5	P40350	334 aa		4.55	□□□□□ -1.68
APC4	YDR118W	FKH2	P41813	862 aa		4.55	□□□□□ -1.68
APC4	YDR118W	SAM37	P50110	327 aa		4.55	□□□□□ -1.68
APC4	YDR118W	MIG2	P53035	382 aa		4.55	□□□□□ -1.68
APC4	YDR118W	YGL108C	P53139	140 aa		4.55	□□□□□ -1.68
APC4	YDR118W	COG2	P53271	262 aa		4.55	□□□□□ -1.68
APC4	YDR118W	AQR1	P53943	586 aa		4.55	□□□□□ -1.68
APC4	YDR118W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
APC4	YDR118W	ARX1	Q03862	593 aa	Known RBP	4.55	□□□□□ -1.68
APC4	YDR118W	BCH1	Q05029	724 aa		4.55	□□□□□ -1.68
APC4	YDR118W	HEL2	Q05580	639 aa	Known RBP	4.55	□□□□□ -1.68
APC4	YDR118W	SNX3	Q08826	162 aa	Known RBP	4.55	□□□□□ -1.68
APC4	YDR118W	GPB1	Q08886	897 aa		4.55	□□□□□ -1.68
APC4	YDR118W	ATP4	P05626	244 aa		4.54	□□□□□ -1.68
APC4	YDR118W	ARD1	P07347	238 aa	Predicted RBP	4.54	□□□□□ -1.68
APC4	YDR118W	RPP1B	P10622	106 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	RSR1	P13856	272 aa		4.54	□□□□□ -1.68
APC4	YDR118W	REC107	P21651	314 aa		4.54	□□□□□ -1.68
APC4	YDR118W	DBR1	P24309	405 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	SPS22	P25380	463 aa		4.54	□□□□□ -1.68
APC4	YDR118W	RSC6	P25632	483 aa		4.54	□□□□□ -1.68
APC4	YDR118W	RFA2	P26754	273 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	RPS0A	P32905	252 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	RPS1A	P33442	255 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	MTC2	P34246	357 aa		4.54	□□□□□ -1.68
APC4	YDR118W	GMH1	P36125	273 aa		4.54	□□□□□ -1.68
APC4	YDR118W	MED8	P38304	223 aa		4.54	□□□□□ -1.68
APC4	YDR118W	YHR078W	P38799	552 aa		4.54	□□□□□ -1.68
APC4	YDR118W	LSM5	P40089	93 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	MET18	P40469	1032 aa		4.54	□□□□□ -1.68
APC4	YDR118W	YFR018C	P43599	363 aa		4.54	□□□□□ -1.68
APC4	YDR118W	LSB3	P43603	459 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	STB2	P46679	850 aa		4.54	□□□□□ -1.68
APC4	YDR118W	NBP35	P52920	328 aa		4.54	□□□□□ -1.68
APC4	YDR118W	HST3	P53687	447 aa		4.54	□□□□□ -1.68
APC4	YDR118W	TDA7	P53882	636 aa	Predicted RBP	4.54	□□□□□ -1.68
APC4	YDR118W	EMI1	Q04406	187 aa		4.54	□□□□□ -1.68
APC4	YDR118W	BCP1	Q06338	283 aa		4.54	□□□□□ -1.68
APC4	YDR118W	ATG10	Q07879	167 aa		4.54	□□□□□ -1.68
APC4	YDR118W	HUA2	Q12134	243 aa		4.54	□□□□□ -1.68
APC4	YDR118W	PST1	Q12355	444 aa		4.54	□□□□□ -1.68
APC4	YDR118W	SAS5	Q99314	248 aa		4.54	□□□□□ -1.68
APC4	YDR118W	FAB1	P34756	2278 aa		4.54	□□□□□ -1.68
APC4	YDR118W	SPT3	P06844	337 aa		4.54	□□□□□ -1.68
APC4	YDR118W	PDC5	P16467	563 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	PRE9	P23638	258 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	ZIP1	P31111	875 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms