RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	UGA1	P17649	471 aa		3.74	□□□□□ -1.81
RPO21	YDL140C	ARP2	P32381	391 aa	Known RBP	3.74	□□□□□ -1.81
RPO21	YDL140C	SHR5	P41912	237 aa		3.74	□□□□□ -1.81
RPO21	YDL140C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	RIP-Chip
RPO21	YDL140C	BOP3	P53958	396 aa		3.74	□□□□□ -1.81
RPO21	YDL140C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	not detected
RPO21	YDL140C	ARO3	P14843	370 aa	Known RBP	3.74	□□□□□ -1.81
RPO21	YDL140C	RPS5	P26783	225 aa	Known RBP	3.74	□□□□□ -1.81
RPO21	YDL140C	PRE4	P30657	266 aa		3.74	□□□□□ -1.81
RPO21	YDL140C	ASK1	P35734	292 aa		3.74	□□□□□ -1.81
RPO21	YDL140C	CCZ1	P38273	704 aa		3.74	□□□□□ -1.81
RPO21	YDL140C	YHR122W	P38829	231 aa		3.74	□□□□□ -1.81
RPO21	YDL140C	PRP39	P39682	629 aa	Known RBP	3.74	□□□□□ -1.81
RPO21	YDL140C	GIP4	P39732	760 aa		3.74	□□□□□ -1.81
RPO21	YDL140C	YGR021W	P53212	290 aa		3.74	□□□□□ -1.81
RPO21	YDL140C	APM1	Q00776	475 aa	Predicted RBP	3.74	□□□□□ -1.81
RPO21	YDL140C	ATG17	Q06410	417 aa		3.74	□□□□□ -1.81
RPO21	YDL140C	YDR306C	Q06640	478 aa		3.74	□□□□□ -1.81
RPO21	YDL140C	RDR1	Q08904	546 aa		3.74	□□□□□ -1.81
RPO21	YDL140C	RAS2	P01120	322 aa	Known RBP	3.73	□□□□□ -1.81
RPO21	YDL140C	HIP1	P06775	603 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	MATALPHA2	P0CY08	210 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	HMLALPHA2	P0CY09	210 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	RNR1	P21524	888 aa	Known RBP	3.73	□□□□□ -1.81
RPO21	YDL140C	LCB1	P25045	558 aa	Known RBP	3.73	□□□□□ -1.81
RPO21	YDL140C	MUD2	P36084	527 aa	Known RBP	3.73	□□□□□ -1.81
RPO21	YDL140C	PCL5	P38794	229 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	PLB1	P39105	664 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	FLC2	P39719	783 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	NEO1	P40527	1151 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	YIR007W	P40566	764 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	STB1	P42845	420 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	DPB11	P47027	764 aa	Predicted RBP	3.73	□□□□□ -1.81
RPO21	YDL140C	NQM1	P53228	333 aa	Predicted RBP	3.73	□□□□□ -1.81
RPO21	YDL140C	ELP3	Q02908	557 aa	Known RBP	3.73	□□□□□ -1.81
RPO21	YDL140C	APC2	Q12440	853 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	ZPS1	Q12512	249 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	RRP43	P25359	394 aa	Predicted RBP	3.73	□□□□□ -1.81
RPO21	YDL140C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	RIP-Chip
RPO21	YDL140C	NDE1	P40215	560 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	FMP32	P43557	207 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	BNA1	P47096	177 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	IBD2	P53892	351 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	YDR179W-A	Q03983	463 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	RPS14A	P06367	137 aa	Known RBP	3.73	□□□□□ -1.81
RPO21	YDL140C	SRP54	P20424	541 aa	Known RBP	3.73	□□□□□ -1.81
RPO21	YDL140C	SFA1	P32771	386 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	SNU114	P36048	1008 aa	Known RBP	3.73	□□□□□ -1.81
RPO21	YDL140C	OCA5	P38738	679 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	RPS14B	P39516	138 aa	Known RBP	3.73	□□□□□ -1.81
RPO21	YDL140C	NTA1	P40354	457 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	YRB2	P40517	327 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	STB4	P50104	949 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	PML39	Q03760	334 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	TAF12	Q03761	539 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	URC2	Q04411	772 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	YPR091C	Q06833	770 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	YPL245W	Q12179	454 aa	Known RBP	3.73	□□□□□ -1.81
RPO21	YDL140C	YCR075W-A	Q3E830	75 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	FOB1	O13329	566 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	SEC2	P17065	759 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	POP5	P28005	173 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	MNN5	P46982	586 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	YNL144C	P53907	740 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	ALO1	P54783	526 aa	Known RBP	3.73	□□□□□ -1.81
RPO21	YDL140C	YLR036C	Q07986	203 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	FRT1	Q99332	602 aa		3.73	□□□□□ -1.81
RPO21	YDL140C	SUI3	P09064	285 aa	Known RBP	3.72	□□□□□ -1.81
RPO21	YDL140C	HBS1	P32769	611 aa	Known RBP	3.72	□□□□□ -1.81
RPO21	YDL140C	SRY1	P36007	326 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	ECM13	P38195	257 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	POA1	P38218	177 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	YBR071W	P38243	211 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	VHC1	P38329	1120 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	OTU1	P43558	301 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	SPT20	P50875	604 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	MDM34	P53083	459 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	UGO1	Q03327	502 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	YLR346C	Q06139	101 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	MCP2	Q06567	569 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	ADH7	P25377	361 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	NUP2	P32499	720 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	IMP3	P32899	183 aa	Predicted RBP	3.72	□□□□□ -1.81
RPO21	YDL140C	MTC2	P34246	357 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	CSG2	P35206	410 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	YHR210C	P38893	341 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	JEM1	P40358	645 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	RMD8	P43620	662 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	AIP1	P46680	615 aa	Known RBP	3.72	□□□□□ -1.81
RPO21	YDL140C	ATG36	P46983	293 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	ATP22	P50273	684 aa	Predicted RBP	3.72	□□□□□ -1.81
RPO21	YDL140C	DIP5	P53388	608 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	IDP3	P53982	420 aa	Known RBP	3.72	□□□□□ -1.81
RPO21	YDL140C	MUK1	Q02866	612 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	VIK1	Q12045	647 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	YPR027C	Q12079	277 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	ARG8	P18544	423 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	MRM1	P25270	412 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	DAL2	P25335	343 aa		3.72	□□□□□ -1.81
RPO21	YDL140C	MSN2	P33748	704 aa		3.72	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms