RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	CWH43	P25618	953 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	PTC6	P25646	442 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	CCR4	P31384	837 aa	Known RBP	6.09	□□□□□ -1.43
RSA4	YCR072C	TYE7	P33122	291 aa	Predicted RBP	6.09	□□□□□ -1.43
RSA4	YCR072C	YKL100C	P34248	587 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	IRS4	P36115	615 aa	Known RBP	6.09	□□□□□ -1.43
RSA4	YCR072C	YBP1	P38315	674 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	EMP65	P40085	556 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	RET2	P43621	546 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	LYS4	P49367	693 aa	Predicted RBP	6.09	□□□□□ -1.43
RSA4	YCR072C	YPT32	P51996	222 aa	Known RBP	6.09	□□□□□ -1.43
RSA4	YCR072C	NUT1	P53114	1132 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	GOR1	P53839	350 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	PET117	Q02771	107 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	YMR010W	Q03687	405 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	SSY1	Q03770	852 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	PRP42	Q03776	544 aa	Known RBP	6.09	□□□□□ -1.43
RSA4	YCR072C	BNA7	Q04066	261 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	YMR027W	Q04371	470 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	NGL1	Q08213	363 aa	Known RBP	6.09	□□□□□ -1.43
RSA4	YCR072C	YTM1	Q12024	460 aa	Predicted RBP	6.09	□□□□□ -1.43
RSA4	YCR072C	YPR022C	Q12139	1133 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	TAH18	Q12181	623 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	HRT3	Q12347	344 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	YHR213W-A	Q8TGT4	77 aa		6.09	□□□□□ -1.43
RSA4	YCR072C	BI4	P03879	638 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	INO1	P11986	533 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	MET8	P15807	274 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	PHO81	P17442	1178 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	APN1	P22936	367 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	CYM1	P32898	989 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	GDH2	P33327	1092 aa	Known RBP	6.09	□□□□□ -1.44
RSA4	YCR072C	MSG5	P38590	489 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	IMD2	P38697	523 aa	Known RBP	6.09	□□□□□ -1.44
RSA4	YCR072C	YHR078W	P38799	552 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	END3	P39013	349 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	EDC3	P39998	551 aa	Known RBP	6.09	□□□□□ -1.44
RSA4	YCR072C	TPA1	P40032	644 aa	Known RBP	6.09	□□□□□ -1.44
RSA4	YCR072C	COS4	P43542	379 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	RSM26	P47141	266 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	MRK1	P50873	501 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	COS1	P53822	381 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	TIM10	P87108	93 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	EGD1	Q02642	157 aa	Known RBP	6.09	□□□□□ -1.44
RSA4	YCR072C	RSC9	Q03124	581 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	YDR249C	Q03787	373 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	TAF11	Q04226	346 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	YPL216W	Q08964	1102 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	FEX2	Q08991	375 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	YLR053C	Q12026	108 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	TY3A-G	Q12173	290 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	RRP36	Q12481	300 aa	Predicted RBP	6.09	□□□□□ -1.44
RSA4	YCR072C	AVL9	Q12500	764 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	TY3A-I	Q99219	290 aa		6.09	□□□□□ -1.44
RSA4	YCR072C	ADE5,7	P07244	802 aa	Known RBP	6.08	□□□□□ -1.44
RSA4	YCR072C	GLK1	P17709	500 aa	Known RBP	6.08	□□□□□ -1.44
RSA4	YCR072C	SGV1	P23293	657 aa	Known RBP	6.08	□□□□□ -1.44
RSA4	YCR072C	SNT1	P25357	1226 aa		6.08	□□□□□ -1.44
RSA4	YCR072C	ASF2	P32448	525 aa	Predicted RBP	6.08	□□□□□ -1.44
RSA4	YCR072C	BIT2	P38346	545 aa		6.08	□□□□□ -1.44
RSA4	YCR072C	SBE22	P38814	852 aa		6.08	□□□□□ -1.44
RSA4	YCR072C	YDR089W	P38966	869 aa		6.08	□□□□□ -1.44
RSA4	YCR072C	FAA2	P39518	744 aa		6.08	□□□□□ -1.44
RSA4	YCR072C	YMR147W	P40218	223 aa	Known RBP	6.08	□□□□□ -1.44
RSA4	YCR072C	YJR061W	P40355	935 aa		6.08	□□□□□ -1.44
RSA4	YCR072C	YJL107C	P42947	387 aa		6.08	□□□□□ -1.44
RSA4	YCR072C	CWC23	P52868	283 aa	Predicted RBP	6.08	□□□□□ -1.44
RSA4	YCR072C	TWF1	P53250	332 aa		6.08	□□□□□ -1.44
RSA4	YCR072C	YGR111W	P53265	400 aa		6.08	□□□□□ -1.44
RSA4	YCR072C	SOL4	P53315	255 aa		6.08	□□□□□ -1.44
RSA4	YCR072C	COG5	P53951	403 aa		6.08	□□□□□ -1.44
RSA4	YCR072C	RRP17	Q04031	235 aa	Predicted RBP	6.08	□□□□□ -1.44
RSA4	YCR072C	IWR1	Q07532	353 aa	Predicted RBP	6.08	□□□□□ -1.44
RSA4	YCR072C	YPL066W	Q12194	479 aa		6.08	□□□□□ -1.44
RSA4	YCR072C	SPE4	Q12455	300 aa		6.08	□□□□□ -1.44
RSA4	YCR072C	DCP1	Q12517	231 aa	Predicted RBP	6.08	□□□□□ -1.44
RSA4	YCR072C	PUT2	P07275	575 aa		6.07	□□□□□ -1.44
RSA4	YCR072C	GRX2	P17695	143 aa	Known RBP	6.07	□□□□□ -1.44
RSA4	YCR072C	SAR1	P20606	190 aa	Known RBP	6.07	□□□□□ -1.44
RSA4	YCR072C	DBP2	P24783	546 aa	Known RBP	6.07	□□□□□ -1.44
RSA4	YCR072C	RER1	P25560	188 aa		6.07	□□□□□ -1.44
RSA4	YCR072C	CYS4	P32582	507 aa	Known RBP	6.07	□□□□□ -1.44
RSA4	YCR072C	ORC2	P32833	620 aa		6.07	□□□□□ -1.44
RSA4	YCR072C	PPQ1	P32945	549 aa		6.07	□□□□□ -1.44
RSA4	YCR072C	YKL023W	P36103	277 aa	Known RBP	6.07	□□□□□ -1.44
RSA4	YCR072C	SRP72	P38688	640 aa	Known RBP	6.07	□□□□□ -1.44
RSA4	YCR072C	YHR045W	P38775	560 aa		6.07	□□□□□ -1.44
RSA4	YCR072C	CKB2	P38930	258 aa		6.07	□□□□□ -1.44
RSA4	YCR072C	SEN34	P39707	275 aa		6.07	□□□□□ -1.44
RSA4	YCR072C	AIM2	P39721	246 aa		6.07	□□□□□ -1.44
RSA4	YCR072C	KRE29	P40026	464 aa		6.07	□□□□□ -1.44
RSA4	YCR072C	IRC24	P40580	263 aa		6.07	□□□□□ -1.44
RSA4	YCR072C	THI6	P41835	540 aa		6.07	□□□□□ -1.44
RSA4	YCR072C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	not detected
RSA4	YCR072C	MAD3	P47074	515 aa		6.07	□□□□□ -1.44
RSA4	YCR072C	YJR124C	P47159	448 aa		6.07	□□□□□ -1.44
RSA4	YCR072C	YML6	P51998	286 aa		6.07	□□□□□ -1.44
RSA4	YCR072C	DAM1	P53267	343 aa		6.07	□□□□□ -1.44
RSA4	YCR072C	NOP19	P53317	196 aa	Predicted RBP	6.07	□□□□□ -1.44
RSA4	YCR072C	MRPL19	P53875	158 aa		6.07	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms