RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W CLC1P17891 233 aa3.28□□□□□ -1.88
DPB3YBR278W SNT1P25357 1226 aa3.28□□□□□ -1.88
DPB3YBR278W MTR2P34232 184 aaKnown RBP3.28□□□□□ -1.88
DPB3YBR278W STV1P37296 890 aa3.28□□□□□ -1.88
DPB3YBR278W JEM1P40358 645 aa3.28□□□□□ -1.88
DPB3YBR278W ULP2P40537 1034 aaPredicted RBP3.28□□□□□ -1.88
DPB3YBR278W ZIM17P42844 174 aa3.28□□□□□ -1.88
DPB3YBR278W ART5P53244 586 aaKnown RBP3.28□□□□□ -1.88
DPB3YBR278W YGR126WP53274 230 aa3.28□□□□□ -1.88
DPB3YBR278W YMR160WQ03823 816 aa3.28□□□□□ -1.88
DPB3YBR278W GAL4P04386 881 aa3.27□□□□□ -1.89
DPB3YBR278W CBP1P07252 654 aa3.27□□□□□ -1.89
DPB3YBR278W PEP4P07267 405 aaKnown RBP3.27□□□□□ -1.89
DPB3YBR278W RPL31BP0C2H9 113 aaKnown RBP3.27□□□□□ -1.89
DPB3YBR278W HOM2P13663 365 aaKnown RBP3.27□□□□□ -1.89
DPB3YBR278W CNA1P23287 553 aa3.27□□□□□ -1.89
DPB3YBR278W TUL1P36096 758 aa3.27□□□□□ -1.89
DPB3YBR278W APE3P37302 537 aaKnown RBP3.27□□□□□ -1.89
DPB3YBR278W THI2P38141 450 aa3.27□□□□□ -1.89
DPB3YBR278W UBA4P38820 440 aa3.27□□□□□ -1.89
DPB3YBR278W LCB2P40970 561 aa3.27□□□□□ -1.89
DPB3YBR278W VMA13P41807 478 aaKnown RBP3.27□□□□□ -1.89
DPB3YBR278W SNO3P43544 222 aa3.27□□□□□ -1.89
DPB3YBR278W ALK1P43633 760 aaKnown RBP3.27□□□□□ -1.89
DPB3YBR278W NET1P47035 1189 aa3.27□□□□□ -1.89
DPB3YBR278W TCB2P48231 1178 aa3.27□□□□□ -1.89
DPB3YBR278W YNL144CP53907 740 aa3.27□□□□□ -1.89
DPB3YBR278W VPS9P54787 451 aa3.27□□□□□ -1.89
DPB3YBR278W TOF2Q02208 771 aa3.27□□□□□ -1.89
DPB3YBR278W KAP120Q02932 1032 aa3.27□□□□□ -1.89
DPB3YBR278W RSC9Q03124 581 aa3.27□□□□□ -1.89
DPB3YBR278W CAC2Q04199 468 aa3.27□□□□□ -1.89
DPB3YBR278W TAP42Q04372 366 aa3.27□□□□□ -1.89
DPB3YBR278W SOV1Q04748 898 aa3.27□□□□□ -1.89
DPB3YBR278W FMP45Q07651 309 aa3.27□□□□□ -1.89
DPB3YBR278W CDC45Q08032 650 aa3.27□□□□□ -1.89
DPB3YBR278W RRI1Q12468 440 aa3.27□□□□□ -1.89
DPB3YBR278W EDE1P34216 1381 aa3.26□□□□□ -1.89
DPB3YBR278W RAV1P47104 1357 aa3.26□□□□□ -1.89
DPB3YBR278W COR1P07256 457 aa3.26□□□□□ -1.89
DPB3YBR278W YMR085WP0CF18 432 aa3.26□□□□□ -1.89
DPB3YBR278W SNF3P10870 884 aa3.26□□□□□ -1.89
DPB3YBR278W PRP2P20095 876 aaPredicted RBP3.26□□□□□ -1.89
DPB3YBR278W PPH22P23595 377 aa3.26□□□□□ -1.89
DPB3YBR278W RML2P32611 393 aa3.26□□□□□ -1.89
DPB3YBR278W TFB1P32776 642 aa3.26□□□□□ -1.89
DPB3YBR278W YME2P32843 850 aa3.26□□□□□ -1.89
DPB3YBR278W HCS1P34243 683 aa3.26□□□□□ -1.89
DPB3YBR278W YKL023WP36103 277 aaKnown RBP3.26□□□□□ -1.89
DPB3YBR278W YHR210CP38893 341 aa3.26□□□□□ -1.89
DPB3YBR278W PHO90P39535 881 aa3.26□□□□□ -1.89
DPB3YBR278W YIL060WP40519 144 aa3.26□□□□□ -1.89
DPB3YBR278W CAK1P43568 368 aaPredicted RBP3.26□□□□□ -1.89
DPB3YBR278W SNG1P46950 547 aa3.26□□□□□ -1.89
DPB3YBR278W NMD5P46970 1048 aa3.26□□□□□ -1.89
DPB3YBR278W PKP2P53170 491 aa3.26□□□□□ -1.89
DPB3YBR278W IDP3P53982 420 aaKnown RBP3.26□□□□□ -1.89
DPB3YBR278W VTC3Q02725 835 aa3.26□□□□□ -1.89
DPB3YBR278W MCP2Q06567 569 aa3.26□□□□□ -1.89
DPB3YBR278W YDL057WQ07379 328 aa3.26□□□□□ -1.89
DPB3YBR278W YDL218WQ07629 317 aa3.26□□□□□ -1.89
DPB3YBR278W NCE102Q12207 173 aaRIP-Chip data3.26□□□□□ -1.89not detected
DPB3YBR278W PDH1Q12428 516 aaKnown RBP3.26□□□□□ -1.89
DPB3YBR278W PAR32Q12515 295 aaKnown RBP3.26□□□□□ -1.89
DPB3YBR278W SPT7P35177 1332 aa3.25□□□□□ -1.89
DPB3YBR278W SPS4P09937 338 aa3.25□□□□□ -1.89
DPB3YBR278W CPR2P23285 205 aa3.25□□□□□ -1.89
DPB3YBR278W SPB1P25582 841 aaPredicted RBP3.25□□□□□ -1.89
DPB3YBR278W ERV1P27882 189 aa3.25□□□□□ -1.89
DPB3YBR278W IDH2P28241 369 aaKnown RBP3.25□□□□□ -1.89
DPB3YBR278W YIM1P28625 365 aa3.25□□□□□ -1.89
DPB3YBR278W RXT2P38255 430 aa3.25□□□□□ -1.89
DPB3YBR278W RRT2P38332 387 aa3.25□□□□□ -1.89
DPB3YBR278W HXT9P40885 567 aa3.25□□□□□ -1.89
DPB3YBR278W ATG27P46989 271 aa3.25□□□□□ -1.89
DPB3YBR278W YJL055WP47044 245 aa3.25□□□□□ -1.89
DPB3YBR278W YGL108CP53139 140 aa3.25□□□□□ -1.89
DPB3YBR278W DRN1P53255 507 aaKnown RBP3.25□□□□□ -1.89
DPB3YBR278W COP1P53622 1201 aaKnown RBP3.25□□□□□ -1.89
DPB3YBR278W DUG3P53871 357 aa3.25□□□□□ -1.89
DPB3YBR278W SLG1P54867 378 aa3.25□□□□□ -1.89
DPB3YBR278W YVH1Q02256 364 aaKnown RBP3.25□□□□□ -1.89
DPB3YBR278W CTL1Q03220 320 aaKnown RBP3.25□□□□□ -1.89
DPB3YBR278W ARP10Q04549 284 aa3.25□□□□□ -1.89
DPB3YBR278W DON1Q05610 365 aa3.25□□□□□ -1.89
DPB3YBR278W SIL1Q08199 421 aa3.25□□□□□ -1.89
DPB3YBR278W THP1Q08231 455 aa3.25□□□□□ -1.89
DPB3YBR278W YOR365CQ08844 703 aa3.25□□□□□ -1.89
DPB3YBR278W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
DPB3YBR278W PGK1P00560 416 aaKnown RBP3.24□□□□□ -1.89
DPB3YBR278W YAP1P19880 650 aaKnown RBP3.24□□□□□ -1.89
DPB3YBR278W RPB8P20436 146 aa3.24□□□□□ -1.89
DPB3YBR278W VPH1P32563 840 aaKnown RBP3.24□□□□□ -1.89
DPB3YBR278W MDL1P33310 695 aa3.24□□□□□ -1.89
DPB3YBR278W SHP1P34223 423 aa3.24□□□□□ -1.89
DPB3YBR278W PIM1P36775 1133 aa3.24□□□□□ -1.89
DPB3YBR278W SLM4P38247 162 aa3.24□□□□□ -1.89
DPB3YBR278W LAG1P38703 411 aa3.24□□□□□ -1.89
DPB3YBR278W TOM71P38825 639 aaKnown RBP3.24□□□□□ -1.89
DPB3YBR278W TIF4631P39935 952 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms