RNA–Protein interactions for RNA: YBR073W

RDH54, Transcript of DNA-dependent ATPase, yeast

Gene RDH54, Length 2,877 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RDH54	YBR073W	SLX9	P53251	210 aa	Predicted RBP	4.08	□□□□□ -1.76
RDH54	YBR073W	YGR111W	P53265	400 aa		4.08	□□□□□ -1.76
RDH54	YBR073W	DBP6	P53734	629 aa	Known RBP	4.08	□□□□□ -1.76
RDH54	YBR073W	MTQ1	P53944	314 aa		4.08	□□□□□ -1.76
RDH54	YBR073W	HRQ1	Q05549	1077 aa		4.08	□□□□□ -1.76
RDH54	YBR073W	YPR089W	O13585	888 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	TDH2	P00358	332 aa	Known RBP	4.07	□□□□□ -1.76
RDH54	YBR073W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
RDH54	YBR073W	ARG4	P04076	463 aa	Predicted RBP	4.07	□□□□□ -1.76
RDH54	YBR073W	LEU4	P06208	619 aa	Known RBP	4.07	□□□□□ -1.76
RDH54	YBR073W	CBP1	P07252	654 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	SAG1	P20840	650 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	NAM9	P27929	486 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	PRP45	P28004	379 aa	Predicted RBP	4.07	□□□□□ -1.76
RDH54	YBR073W	LHS1	P36016	881 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	AIM29	P36154	155 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	BMT2	P38278	337 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	URA8	P38627	578 aa	Predicted RBP	4.07	□□□□□ -1.76
RDH54	YBR073W	SAP1	P39955	897 aa	Known RBP	4.07	□□□□□ -1.76
RDH54	YBR073W	SAD1	P43589	448 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	NET1	P47035	1189 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	PXR1	P53335	271 aa	Predicted RBP	4.07	□□□□□ -1.76
RDH54	YBR073W	RCF2	P53721	224 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	ADE12	P80210	433 aa	Known RBP	4.07	□□□□□ -1.76
RDH54	YBR073W	GIS4	Q04233	774 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	YFT2	Q06676	274 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	AAD4	Q07747	329 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	HRK1	Q08732	759 aa	Known RBP	4.07	□□□□□ -1.76
RDH54	YBR073W	SUL2	Q12325	893 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	YPT6	Q99260	215 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	SPE1	P08432	466 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	RIT1	P23796	513 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	PET18	P25362	215 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	SIN4	P32259	974 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	AAR2	P32357	355 aa	Predicted RBP	4.07	□□□□□ -1.76
RDH54	YBR073W	REC104	P33323	182 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	YBL055C	P34220	418 aa	Predicted RBP	4.07	□□□□□ -1.76
RDH54	YBR073W	VID24	P38263	362 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	FHL1	P39521	936 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	YFR018C	P43599	363 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	IRC7	P43623	340 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	YJL181W	P46987	611 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	YPS7	Q06325	596 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	YDR262W	Q12331	272 aa		4.07	□□□□□ -1.76
RDH54	YBR073W	COX2	P00410	251 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	OSM1	P21375	501 aa	Known RBP	4.06	□□□□□ -1.76
RDH54	YBR073W	YCL002C	P25565	263 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	ARP2	P32381	391 aa	Known RBP	4.06	□□□□□ -1.76
RDH54	YBR073W	RML2	P32611	393 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	SLM4	P38247	162 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	PPE1	P38796	400 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	SUR2	P38992	349 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	STB2	P46679	850 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	ACS1	Q01574	713 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	ATC1	Q04005	294 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	ICL2	Q12031	575 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	YLR149C	Q99296	730 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	PMA1	P05030	918 aa	Known RBP	4.06	□□□□□ -1.76
RDH54	YBR073W	CWP1	P28319	239 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	HXT3	P32466	567 aa	Known RBP	4.06	□□□□□ -1.76
RDH54	YBR073W	MRPL4	P36517	319 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	HMT1	P38074	348 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	POP7	P38291	140 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	YFL054C	P43549	646 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	YAT1	P80235	687 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	YDR222W	Q04925	415 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	DUS3	Q06053	668 aa	Known RBP	4.06	□□□□□ -1.76
RDH54	YBR073W	STP4	Q07351	490 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	NOP12	Q08208	459 aa	Known RBP	4.06	□□□□□ -1.76
RDH54	YBR073W	GPR1	Q12361	961 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.06	□□□□□ -1.76
RDH54	YBR073W	MTR10	Q99189	972 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	Q0142	Q9ZZW4	58 aa		4.06	□□□□□ -1.76
RDH54	YBR073W	RPO26	P20435	155 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	KGD1	P20967	1014 aa	Known RBP	4.05	□□□□□ -1.76
RDH54	YBR073W	MGR1	P25573	417 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	WBP1	P33767	430 aa	Known RBP	4.05	□□□□□ -1.76
RDH54	YBR073W	TAF14	P35189	244 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	RPC25	P35718	212 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	FES1	P38260	290 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	FRT2	P39734	528 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	AFG3	P39925	761 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	SSP120	P39931	234 aa	Known RBP	4.05	□□□□□ -1.76
RDH54	YBR073W	GCV1	P48015	400 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	PEF1	P53238	335 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	DAM1	P53267	343 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	YGR126W	P53274	230 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	ORC4	P54791	529 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	KAP120	Q02932	1032 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	GCN5	Q03330	439 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	RCR2	Q03446	210 aa	Known RBP	4.05	□□□□□ -1.76
RDH54	YBR073W	LRS4	Q04087	347 aa	Known RBP	4.05	□□□□□ -1.76
RDH54	YBR073W	ARG7	Q04728	441 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	TRI1	Q05024	226 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	YOR059C	Q08448	450 aa	Known RBP	4.05	□□□□□ -1.76
RDH54	YBR073W	NOT5	Q12514	560 aa	Predicted RBP	4.05	□□□□□ -1.76
RDH54	YBR073W	NBL1	Q3E7Y6	73 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	TY2A-LR1	P0C2J4	438 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	TY2A-F	P0CX61	438 aa		4.05	□□□□□ -1.76
RDH54	YBR073W	TY2A-GR2	P0CX62	438 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms