RNA–Protein interactions for RNA: YAR008W

SEN34, Transcript of Subunit of the tRNA splicing endonuclease, yeast

Gene SEN34, Length 828 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN34	YAR008W	HOS1	Q12214	470 aa		5.75	□□□□□ -1.49
SEN34	YAR008W	YOR114W	Q12219	294 aa		5.75	□□□□□ -1.49
SEN34	YAR008W	SWI5	P08153	709 aa		5.74	□□□□□ -1.49
SEN34	YAR008W	RPS4A	P0CX35	261 aa	Known RBP	5.74	□□□□□ -1.49
SEN34	YAR008W	RPS4B	P0CX36	261 aa	Known RBP	5.74	□□□□□ -1.49
SEN34	YAR008W	INO1	P11986	533 aa		5.74	□□□□□ -1.49
SEN34	YAR008W	KIN2	P13186	1147 aa	Known RBP	5.74	□□□□□ -1.49
SEN34	YAR008W	PRP2	P20095	876 aa	Predicted RBP	5.74	□□□□□ -1.49
SEN34	YAR008W	GRR1	P24814	1151 aa		5.74	□□□□□ -1.49
SEN34	YAR008W	CLB1	P24868	471 aa		5.74	□□□□□ -1.49
SEN34	YAR008W	BUD14	P27637	709 aa		5.74	□□□□□ -1.49
SEN34	YAR008W	SRB5	P32585	307 aa		5.74	□□□□□ -1.49
SEN34	YAR008W	KAP122	P32767	1081 aa		5.74	□□□□□ -1.49
SEN34	YAR008W	KES1	P35844	434 aa	Known RBP	5.74	□□□□□ -1.49
SEN34	YAR008W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
SEN34	YAR008W	HOS4	P40480	1083 aa		5.74	□□□□□ -1.49
SEN34	YAR008W	TFG2	P41896	400 aa	Predicted RBP	5.74	□□□□□ -1.49
SEN34	YAR008W	TPO4	Q12256	659 aa		5.74	□□□□□ -1.49
SEN34	YAR008W	YDL177C	Q12257	170 aa		5.74	□□□□□ -1.49
SEN34	YAR008W	NSP1	P14907	823 aa	Known RBP	5.73	□□□□□ -1.49
SEN34	YAR008W	BAS1	P22035	811 aa		5.73	□□□□□ -1.49
SEN34	YAR008W	SBA1	P28707	216 aa	Known RBP	5.73	□□□□□ -1.49
SEN34	YAR008W	MKK1	P32490	508 aa		5.73	□□□□□ -1.49
SEN34	YAR008W	MRP21	P38175	177 aa		5.73	□□□□□ -1.49
SEN34	YAR008W	YSW1	P38280	609 aa		5.73	□□□□□ -1.49
SEN34	YAR008W	SMF2	P38778	549 aa		5.73	□□□□□ -1.49
SEN34	YAR008W	MNL1	P38888	796 aa		5.73	□□□□□ -1.49
SEN34	YAR008W	SET5	P38890	526 aa	Known RBP	5.73	□□□□□ -1.49
SEN34	YAR008W	PXA1	P41909	870 aa		5.73	□□□□□ -1.49
SEN34	YAR008W	LYS5	P50113	272 aa		5.73	□□□□□ -1.49
SEN34	YAR008W	YDL121C	Q07541	149 aa		5.73	□□□□□ -1.49
SEN34	YAR008W	YOR097C	Q12274	175 aa	Predicted RBP	5.73	□□□□□ -1.49
SEN34	YAR008W	NSI1	Q12457	570 aa		5.73	□□□□□ -1.49
SEN34	YAR008W	ERG20	P08524	352 aa	Known RBP	5.72	□□□□□ -1.49
SEN34	YAR008W	YCR099C	P25657	155 aa		5.72	□□□□□ -1.49
SEN34	YAR008W	MKK2	P32491	506 aa		5.72	□□□□□ -1.49
SEN34	YAR008W	RPN12	P32496	274 aa		5.72	□□□□□ -1.49
SEN34	YAR008W	UGP1	P32861	499 aa	Known RBP	5.72	□□□□□ -1.49
SEN34	YAR008W	ATO2	P32907	282 aa		5.72	□□□□□ -1.49
SEN34	YAR008W	TIP20	P33891	701 aa		5.72	□□□□□ -1.49
SEN34	YAR008W	YPT52	P36018	234 aa	Known RBP	5.72	□□□□□ -1.49
SEN34	YAR008W	VPS24	P36095	224 aa	Known RBP	5.72	□□□□□ -1.49
SEN34	YAR008W	AHP1	P38013	176 aa	Known RBP	5.72	□□□□□ -1.49
SEN34	YAR008W	YHR020W	P38708	688 aa	Known RBP	5.72	□□□□□ -1.49
SEN34	YAR008W	SPF1	P39986	1215 aa	Known RBP	5.72	□□□□□ -1.49
SEN34	YAR008W	SSL2	Q00578	843 aa		5.72	□□□□□ -1.49
SEN34	YAR008W	AAT1	Q01802	451 aa		5.72	□□□□□ -1.49
SEN34	YAR008W	YLR462W	O13556	202 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	QCR6	P00127	147 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	SSA3	P09435	649 aa	Known RBP	5.71	□□□□□ -1.5
SEN34	YAR008W	ERR1	P0CX10	437 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	ERR2	P0CX11	437 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	ERG11	P10614	530 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	MET8	P15807	274 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	PRP16	P15938	1071 aa	Predicted RBP	5.71	□□□□□ -1.5
SEN34	YAR008W	PHO13	P19881	312 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	AGP1	P25376	633 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	GID7	P25569	745 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	PEX5	P35056	612 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	LHS1	P36016	881 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	MCM7	P38132	845 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	YHL049C	P38722	271 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	YHR127W	P38833	243 aa	Known RBP	5.71	□□□□□ -1.5
SEN34	YAR008W	CUP9	P41817	306 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	ERR3	P42222	437 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	YFL064C	P43540	174 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	VPS75	P53853	264 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	UTP5	Q04177	643 aa	Known RBP	5.71	□□□□□ -1.5
SEN34	YAR008W	YDR109C	Q04585	715 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	BSC2	Q05611	235 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	YRA1	Q12159	226 aa	Known RBP	5.71	□□□□□ -1.5
SEN34	YAR008W	YBL111C	Q3E7Y5	667 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	TY4A-H	Q6Q5P6	413 aa		5.71	□□□□□ -1.5
SEN34	YAR008W	YCL068C	P25593	260 aa		5.7	□□□□□ -1.5
SEN34	YAR008W	MF(ALPHA)2	P32435	120 aa		5.7	□□□□□ -1.5
SEN34	YAR008W	SOL2	P37262	315 aa		5.7	□□□□□ -1.5
SEN34	YAR008W	SEO1	P39709	593 aa		5.7	□□□□□ -1.5
SEN34	YAR008W	DPH1	P40487	425 aa	Known RBP	5.7	□□□□□ -1.5
SEN34	YAR008W	BNA3	P47039	444 aa	Known RBP	5.7	□□□□□ -1.5
SEN34	YAR008W	OCA1	P50946	238 aa	Predicted RBP	5.7	□□□□□ -1.5
SEN34	YAR008W	PEX8	P53248	589 aa		5.7	□□□□□ -1.5
SEN34	YAR008W	YGR250C	P53316	781 aa	Known RBP	5.7	□□□□□ -1.5
SEN34	YAR008W	MEH1	Q02205	184 aa		5.7	□□□□□ -1.5
SEN34	YAR008W	NOP6	Q07623	225 aa	Known RBP	5.7	□□□□□ -1.5
SEN34	YAR008W	PHO5	P00635	467 aa		5.69	□□□□□ -1.5
SEN34	YAR008W	YAR066W	P0CX18	203 aa		5.69	□□□□□ -1.5
SEN34	YAR008W	YHR214W	P0CX19	203 aa		5.69	□□□□□ -1.5
SEN34	YAR008W	CLN2	P20438	545 aa		5.69	□□□□□ -1.5
SEN34	YAR008W	YJU2	P28320	278 aa	Predicted RBP	5.69	□□□□□ -1.5
SEN34	YAR008W	HRR25	P29295	494 aa	Known RBP	5.69	□□□□□ -1.5
SEN34	YAR008W	SRP101	P32916	621 aa		5.69	□□□□□ -1.5
SEN34	YAR008W	MFT1	P33441	392 aa	Known RBP	5.69	□□□□□ -1.5
SEN34	YAR008W	RRP1	P35178	278 aa	Predicted RBP	5.69	□□□□□ -1.5
SEN34	YAR008W	MMS21	P38632	267 aa		5.69	□□□□□ -1.5
SEN34	YAR008W	HSE1	P38753	452 aa		5.69	□□□□□ -1.5
SEN34	YAR008W	DSS1	P39112	969 aa		5.69	□□□□□ -1.5
SEN34	YAR008W	RPS26A	P39938	119 aa	Known RBP	5.69	□□□□□ -1.5
SEN34	YAR008W	RPS26B	P39939	119 aa	Known RBP	5.69	□□□□□ -1.5
SEN34	YAR008W	SAP1	P39955	897 aa	Known RBP	5.69	□□□□□ -1.5
SEN34	YAR008W	YEL020C	P39994	560 aa		5.69	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 103.7 ms