RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	ABCB6	Q9NP58	842 aa		7.31	□□□□□ -1.24
CASC19-256	ENST00000641746	GSTP1	P09211	210 aa	Known RBP	7.3	□□□□□ -1.24
CASC19-256	ENST00000641746	IKZF1	Q13422	519 aa		7.3	□□□□□ -1.24
CASC19-256	ENST00000641746	PKN2	Q16513	984 aa	Known RBP	7.3	□□□□□ -1.24
CASC19-256	ENST00000641746	ECM1	Q16610	540 aa		7.3	□□□□□ -1.24
CASC19-256	ENST00000641746	ISL2	Q96A47	359 aa		7.3	□□□□□ -1.24
CASC19-256	ENST00000641746	RNF123	Q5XPI4	1314 aa		7.29	□□□□□ -1.24
CASC19-256	ENST00000641746	IGF2BP3	O00425	579 aa	Known RBP eCLIP	7.29	□□□□□ -1.24
CASC19-256	ENST00000641746	GLI1	P08151	1106 aa		7.29	□□□□□ -1.24
CASC19-256	ENST00000641746	C1QTNF9	P0C862	333 aa		7.29	□□□□□ -1.24
CASC19-256	ENST00000641746	NOG	Q13253	232 aa		7.29	□□□□□ -1.24
CASC19-256	ENST00000641746	SPACA3	Q8IXA5	215 aa		7.29	□□□□□ -1.24
CASC19-256	ENST00000641746	SYNE4	Q8N205	404 aa		7.29	□□□□□ -1.24
CASC19-256	ENST00000641746	RNF186	Q9NXI6	227 aa		7.29	□□□□□ -1.24
CASC19-256	ENST00000641746	SAGE1	Q9NXZ1	904 aa		7.29	□□□□□ -1.24
CASC19-256	ENST00000641746	LMCD1	Q9NZU5	365 aa		7.29	□□□□□ -1.24
CASC19-256	ENST00000641746	RAPGEFL1	Q9UHV5	662 aa		7.29	□□□□□ -1.24
CASC19-256	ENST00000641746	TAF1L	Q8IZX4	1826 aa		7.29	□□□□□ -1.24
CASC19-256	ENST00000641746	ADGRB1	O14514	1584 aa		7.29	□□□□□ -1.24
CASC19-256	ENST00000641746	SZT2	Q5T011	3432 aa		7.29	□□□□□ -1.24
CASC19-256	ENST00000641746	TTC21B	Q7Z4L5	1316 aa		7.28	□□□□□ -1.24
CASC19-256	ENST00000641746	TMEM238L	A0A1B0GVL6	79 aa		7.28	□□□□□ -1.24
CASC19-256	ENST00000641746	NEFL	P07196	543 aa		7.28	□□□□□ -1.24
CASC19-256	ENST00000641746	PLA2G5	P39877	138 aa		7.28	□□□□□ -1.24
CASC19-256	ENST00000641746	NKPD1	Q17RQ9	610 aa		7.28	□□□□□ -1.24
CASC19-256	ENST00000641746	PRPF40B	Q6NWY9	871 aa	Known RBP	7.28	□□□□□ -1.24
CASC19-256	ENST00000641746	PDZD3	Q86UT5	571 aa		7.28	□□□□□ -1.24
CASC19-256	ENST00000641746	C2CD5	Q86YS7	1000 aa		7.28	□□□□□ -1.24
CASC19-256	ENST00000641746	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	7.28	□□□□□ -1.24
CASC19-256	ENST00000641746	PIGB	Q92521	554 aa		7.28	□□□□□ -1.24
CASC19-256	ENST00000641746	FAM122A	Q96E09	287 aa		7.28	□□□□□ -1.24
CASC19-256	ENST00000641746	HHIPL1	Q96JK4	782 aa		7.28	□□□□□ -1.24
CASC19-256	ENST00000641746	TAOK3	Q9H2K8	898 aa		7.28	□□□□□ -1.24
CASC19-256	ENST00000641746	NPHS2	Q9NP85	383 aa		7.28	□□□□□ -1.24
CASC19-256	ENST00000641746	ANO2	Q9NQ90	1003 aa		7.28	□□□□□ -1.24
CASC19-256	ENST00000641746	HDAC9	Q9UKV0	1011 aa		7.28	□□□□□ -1.24
CASC19-256	ENST00000641746		H0YGN5	161 aa		7.27	□□□□□ -1.25
CASC19-256	ENST00000641746		H0YIN7	160 aa		7.27	□□□□□ -1.25
CASC19-256	ENST00000641746	POLRMT	O00411	1230 aa	Known RBP	7.27	□□□□□ -1.25
CASC19-256	ENST00000641746	CELF2	O95319	508 aa	Known RBP	7.27	□□□□□ -1.25
CASC19-256	ENST00000641746	BUD31	P41223	144 aa	Predicted RBP	7.27	□□□□□ -1.25
CASC19-256	ENST00000641746	ZC3H12A	Q5D1E8	599 aa	Known RBP	7.27	□□□□□ -1.25
CASC19-256	ENST00000641746	PHLDB3	Q6NSJ2	640 aa		7.27	□□□□□ -1.25
CASC19-256	ENST00000641746	RNF214	Q8ND24	703 aa		7.27	□□□□□ -1.25
CASC19-256	ENST00000641746	RGS22	Q8NE09	1264 aa		7.27	□□□□□ -1.25
CASC19-256	ENST00000641746	SSU72	Q9NP77	194 aa	Known RBP	7.27	□□□□□ -1.25
CASC19-256	ENST00000641746	SRP68	Q9UHB9	627 aa	Known RBP	7.27	□□□□□ -1.25
CASC19-256	ENST00000641746	GTF2IRD1	Q9UHL9	959 aa		7.27	□□□□□ -1.25
CASC19-256	ENST00000641746	MTMR7	Q9Y216	660 aa		7.27	□□□□□ -1.25
CASC19-256	ENST00000641746	NFAT5	O94916	1531 aa		7.27	□□□□□ -1.25
CASC19-256	ENST00000641746	ZNF541	Q9H0D2	1346 aa		7.27	□□□□□ -1.25
CASC19-256	ENST00000641746	CUL9	Q8IWT3	2517 aa		7.26	□□□□□ -1.25
CASC19-256	ENST00000641746	COL6A3	P12111	3177 aa		7.26	□□□□□ -1.25
CASC19-256	ENST00000641746	TMEM67	Q5HYA8	995 aa		7.26	□□□□□ -1.25
CASC19-256	ENST00000641746	CYFIP1	Q7L576	1253 aa		7.26	□□□□□ -1.25
CASC19-256	ENST00000641746	ZNF622	Q969S3	477 aa	Known RBP eCLIP	7.26	□□□□□ -1.25
CASC19-256	ENST00000641746	KIRREL1	Q96J84	757 aa		7.26	□□□□□ -1.25
CASC19-256	ENST00000641746	ZNF408	Q9H9D4	720 aa		7.26	□□□□□ -1.25
CASC19-256	ENST00000641746	CPNE3	O75131	537 aa	Known RBP	7.25	□□□□□ -1.25
CASC19-256	ENST00000641746	RPS6KA4	O75676	772 aa		7.25	□□□□□ -1.25
CASC19-256	ENST00000641746	ABL1	P00519	1130 aa		7.25	□□□□□ -1.25
CASC19-256	ENST00000641746	ERVK-24	P63145	666 aa		7.25	□□□□□ -1.25
CASC19-256	ENST00000641746	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.25	□□□□□ -1.25
CASC19-256	ENST00000641746	KIF23	Q02241	960 aa	Predicted RBP	7.25	□□□□□ -1.25
CASC19-256	ENST00000641746	ORC1	Q13415	861 aa		7.25	□□□□□ -1.25
CASC19-256	ENST00000641746	FBXO46	Q6PJ61	603 aa	Predicted RBP	7.25	□□□□□ -1.25
CASC19-256	ENST00000641746	MPZL3	Q6UWV2	235 aa		7.25	□□□□□ -1.25
CASC19-256	ENST00000641746	KCNB2	Q92953	911 aa		7.25	□□□□□ -1.25
CASC19-256	ENST00000641746	SNX27	Q96L92	541 aa		7.25	□□□□□ -1.25
CASC19-256	ENST00000641746	KRTAP17-1	Q9BYP8	105 aa		7.25	□□□□□ -1.25
CASC19-256	ENST00000641746	ASAP1	Q9ULH1	1129 aa		7.25	□□□□□ -1.25
CASC19-256	ENST00000641746	ADAMTSL1	Q8N6G6	1762 aa		7.25	□□□□□ -1.25
CASC19-256	ENST00000641746	LTBP3	Q9NS15	1303 aa		7.25	□□□□□ -1.25
CASC19-256	ENST00000641746	NFIB	O00712	420 aa		7.24	□□□□□ -1.25
CASC19-256	ENST00000641746	EN2	P19622	333 aa	Predicted RBP	7.24	□□□□□ -1.25
CASC19-256	ENST00000641746	TM4SF1	P30408	202 aa		7.24	□□□□□ -1.25
CASC19-256	ENST00000641746	ZNF211	Q13398	564 aa	Predicted RBP	7.24	□□□□□ -1.25
CASC19-256	ENST00000641746	FBXO15	Q8NCQ5	510 aa	Predicted RBP	7.24	□□□□□ -1.25
CASC19-256	ENST00000641746	C19orf73	Q9NVV2	129 aa		7.24	□□□□□ -1.25
CASC19-256	ENST00000641746	SCN4A	P35499	1836 aa		7.23	□□□□□ -1.25
CASC19-256	ENST00000641746	RAPGEF4	Q8WZA2	1011 aa		7.23	□□□□□ -1.25
CASC19-256	ENST00000641746	CCDC74A	Q96AQ1	378 aa		7.23	□□□□□ -1.25
CASC19-256	ENST00000641746	BRPF3	Q9ULD4	1205 aa		7.23	□□□□□ -1.25
CASC19-256	ENST00000641746	CCDC88A	Q3V6T2	1871 aa		7.23	□□□□□ -1.25
CASC19-256	ENST00000641746	TTC21A	Q8NDW8	1320 aa		7.23	□□□□□ -1.25
CASC19-256	ENST00000641746	CLCN7	P51798	805 aa		7.22	□□□□□ -1.25
CASC19-256	ENST00000641746	HUNK	P57058	714 aa		7.22	□□□□□ -1.25
CASC19-256	ENST00000641746	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	7.22	□□□□□ -1.25	2e-7	■■■□□ 16
CASC19-256	ENST00000641746	STK35	Q8TDR2	534 aa		7.22	□□□□□ -1.25
CASC19-256	ENST00000641746	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.22	□□□□□ -1.25
CASC19-256	ENST00000641746	IP6K1	Q92551	441 aa		7.22	□□□□□ -1.25
CASC19-256	ENST00000641746	ZNF428	Q96B54	188 aa		7.22	□□□□□ -1.25
CASC19-256	ENST00000641746	TMEM39A	Q9NV64	488 aa		7.22	□□□□□ -1.25
CASC19-256	ENST00000641746	PCDH11X	Q9BZA7	1347 aa		7.22	□□□□□ -1.25
CASC19-256	ENST00000641746	PCDH11Y	Q9BZA8	1340 aa		7.22	□□□□□ -1.25
CASC19-256	ENST00000641746	USP42	Q9H9J4	1324 aa	Known RBP	7.22	□□□□□ -1.25
CASC19-256	ENST00000641746	USP31	Q70CQ4	1352 aa		7.21	□□□□□ -1.25
CASC19-256	ENST00000641746	FAM155A	B1AL88	458 aa	Predicted RBP	7.21	□□□□□ -1.26
CASC19-256	ENST00000641746	NPIPB6	E9PJ23	425 aa		7.21	□□□□□ -1.26
CASC19-256	ENST00000641746	CYP27B1	O15528	508 aa		7.21	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms