RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.04□□□□□ -0.48
CASC19-230ENST00000641421 RMND1Q9NWS8 449 aa12.04□□□□□ -0.48
CASC19-230ENST00000641421 PIM2Q9P1W9 311 aa12.04□□□□□ -0.48
CASC19-230ENST00000641421 R3HCC1Q9Y3T6 440 aaKnown RBP12.04□□□□□ -0.48
CASC19-230ENST00000641421 NFE2L3Q9Y4A8 694 aa12.04□□□□□ -0.48
CASC19-230ENST00000641421 COL4A5P29400 1685 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 PPP1R3GB7ZBB8 358 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 F5H6K3 240 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 RPN1P04843 607 aaKnown RBP12.03□□□□□ -0.48
CASC19-230ENST00000641421 CD44P16070 742 aaKnown RBP12.03□□□□□ -0.48
CASC19-230ENST00000641421 ZNF18P17022 549 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 TNNI2P48788 182 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 KLRC3Q07444 240 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 UBE2SQ16763 222 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 QRICH1Q2TAL8 776 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 SPATA1Q5VX52 437 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 CCDC150Q8NCX0 1101 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 AGBL3Q8NEM8 1001 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 DPF2Q92785 391 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 GMCL1Q96IK5 515 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 MTRQ99707 1265 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 CUEDC2Q9H467 287 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 PSTPIP2Q9H939 334 aa12.03□□□□□ -0.48
CASC19-230ENST00000641421 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
CASC19-230ENST00000641421 NDUFB10O96000 172 aa12.02□□□□□ -0.48
CASC19-230ENST00000641421 CLK2P49760 499 aaKnown RBP12.02□□□□□ -0.48
CASC19-230ENST00000641421 JAG1P78504 1218 aa12.02□□□□□ -0.48
CASC19-230ENST00000641421 RRP1BQ14684 758 aaKnown RBP12.02□□□□□ -0.48
CASC19-230ENST00000641421 CDC37Q16543 378 aaPredicted RBP12.02□□□□□ -0.48
CASC19-230ENST00000641421 CALCRLQ16602 461 aa12.02□□□□□ -0.48
CASC19-230ENST00000641421 NAALADL2Q58DX5 795 aa12.02□□□□□ -0.48
CASC19-230ENST00000641421 KLHL10Q6JEL2 608 aa12.02□□□□□ -0.48
CASC19-230ENST00000641421 MTMR14Q8NCE2 650 aa12.02□□□□□ -0.48
CASC19-230ENST00000641421 MED15Q96RN5 788 aa12.02□□□□□ -0.48
CASC19-230ENST00000641421 MAGEF1Q9HAY2 307 aa12.02□□□□□ -0.48
CASC19-230ENST00000641421 SYNPO2Q9UMS6 1093 aa12.02□□□□□ -0.48
CASC19-230ENST00000641421 KIF13BQ9NQT8 1826 aa12.02□□□□□ -0.49
CASC19-230ENST00000641421 SYNRGQ9UMZ2 1314 aa12.02□□□□□ -0.49
CASC19-230ENST00000641421 CNTNAP1P78357 1384 aa12.02□□□□□ -0.49
CASC19-230ENST00000641421 ZBTB7AO95365 584 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 MYL1P05976 194 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 BMP3P12645 472 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 SKILP12757 684 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 POLD1P28340 1107 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 TECP42680 631 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 TXKP42681 527 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 TERF1P54274 439 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 CCZ1BP86790 482 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 CCZ1P86791 482 aaPredicted RBP12.01□□□□□ -0.49
CASC19-230ENST00000641421 IKQ13123 557 aaPredicted RBP12.01□□□□□ -0.49
CASC19-230ENST00000641421 TMEM266Q2M3C6 531 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 DALRD3Q5D0E6 543 aaKnown RBP12.01□□□□□ -0.49
CASC19-230ENST00000641421 SYDE2Q5VT97 1194 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 FKBP1CQ5VVH2 108 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 VSTM4Q8IW00 320 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 SMYD4Q8IYR2 804 aaPredicted RBP12.01□□□□□ -0.49
CASC19-230ENST00000641421 MTMR9Q96QG7 549 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 PLIN2Q99541 437 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 NUP88Q99567 741 aaPredicted RBP12.01□□□□□ -0.49
CASC19-230ENST00000641421 NAP1L4Q99733 375 aaKnown RBP12.01□□□□□ -0.49
CASC19-230ENST00000641421 VEZTQ9HBM0 779 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 ARHGEF10LQ9HCE6 1279 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 PCDHA1Q9Y5I3 950 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 SLC37A4O43826 429 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 EDIL3O43854 480 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 TDP2O95551 362 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 GCFC2P16383 781 aaKnown RBP12.01□□□□□ -0.49
CASC19-230ENST00000641421 PLCG1P19174 1290 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 SFPQP23246 707 aaKnown RBP eCLIP12.01□□□□□ -0.49
CASC19-230ENST00000641421 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.49
CASC19-230ENST00000641421 STX17P56962 302 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 CXCL9Q07325 125 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 SEMA3FQ13275 785 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 HSP90AA4PQ58FG1 418 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 ZNF658Q5TYW1 1059 aaPredicted RBP12.01□□□□□ -0.49
CASC19-230ENST00000641421 CIAPIN1Q6FI81 312 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 PPP4R3AQ6IN85 833 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 IGSF22Q8N9C0 903 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 CALML4Q96GE6 196 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 SAMSN1Q9NSI8 373 aaKnown RBP12.01□□□□□ -0.49
CASC19-230ENST00000641421 KBTBD4Q9NVX7 518 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 CTNND2Q9UQB3 1225 aa12.01□□□□□ -0.49
CASC19-230ENST00000641421 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
CASC19-230ENST00000641421 TMEM232C9JQI7 657 aa12□□□□□ -0.49
CASC19-230ENST00000641421 NRDCO43847 1150 aa12□□□□□ -0.49
CASC19-230ENST00000641421 KCNB1Q14721 858 aa12□□□□□ -0.49
CASC19-230ENST00000641421 TPD52L1Q16890 204 aaPredicted RBP12□□□□□ -0.49
CASC19-230ENST00000641421 ARMCX5Q6P1M9 558 aa12□□□□□ -0.49
CASC19-230ENST00000641421 BTNL9Q6UXG8 535 aa12□□□□□ -0.49
CASC19-230ENST00000641421 FBXO11Q86XK2 927 aa12□□□□□ -0.49
CASC19-230ENST00000641421 CCDC47Q96A33 483 aaKnown RBP12□□□□□ -0.49
CASC19-230ENST00000641421 ZBED3Q96IU2 234 aaPredicted RBP12□□□□□ -0.49
CASC19-230ENST00000641421 AMNQ9BXJ7 453 aa12□□□□□ -0.49
CASC19-230ENST00000641421 RAB34Q9BZG1 259 aa12□□□□□ -0.49
CASC19-230ENST00000641421 TAOK3Q9H2K8 898 aa12□□□□□ -0.49
CASC19-230ENST00000641421 LRWD1Q9UFC0 647 aa12□□□□□ -0.49
CASC19-230ENST00000641421 RWDD2AQ9UIY3 292 aa12□□□□□ -0.49
CASC19-230ENST00000641421 ARFGEF1Q9Y6D6 1849 aa12□□□□□ -0.49
CASC19-230ENST00000641421 A0A1W2PRG0 241 aa11.99□□□□□ -0.49
CASC19-230ENST00000641421 USP17L15C9J2P7 530 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms