RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 POLR2BP30876 1174 aaKnown RBP12.17□□□□□ -0.46
SCN1B-208ENST00000640135 MAGEA1P43355 309 aa12.17□□□□□ -0.46
SCN1B-208ENST00000640135 FAM173BQ6P4H8 233 aa12.17□□□□□ -0.46
SCN1B-208ENST00000640135 PNMA6FA0A0J9YX94 578 aa12.17□□□□□ -0.46
SCN1B-208ENST00000640135 PRPF3O43395 683 aaKnown RBP12.17□□□□□ -0.46
SCN1B-208ENST00000640135 ALDH3A1P30838 453 aa12.17□□□□□ -0.46
SCN1B-208ENST00000640135 BPIFB4P59827 614 aa12.17□□□□□ -0.46
SCN1B-208ENST00000640135 RAD51AP2Q09MP3 1159 aa12.17□□□□□ -0.46
SCN1B-208ENST00000640135 KMT5BQ4FZB7 885 aa12.17□□□□□ -0.46
SCN1B-208ENST00000640135 ARMCX5Q6P1M9 558 aa12.17□□□□□ -0.46
SCN1B-208ENST00000640135 GIMAP8Q8ND71 665 aaPredicted RBP12.17□□□□□ -0.46
SCN1B-208ENST00000640135 PPP1R9BQ96SB3 815 aa12.17□□□□□ -0.46
SCN1B-208ENST00000640135 LZTFL1Q9NQ48 299 aa12.17□□□□□ -0.46
SCN1B-208ENST00000640135 TRPM1Q7Z4N2 1603 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 A0A1W2PQ27 194 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 A0A1W2PQ64 194 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 A0A1W2PQD8 194 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 USP17L5A8MUK1 530 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 AP3B2Q13367 1082 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 ELMSAN1Q6PJG2 1045 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 GBP6Q6ZN66 633 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 CROCCP2Q86T23 111 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 RNF169Q8NCN4 708 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 STK17AQ9UEE5 414 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 CEP152O94986 1710 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 IGKV5-2P06315 115 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 EN1Q05925 392 aaPredicted RBP12.16□□□□□ -0.46
SCN1B-208ENST00000640135 PTGDRQ13258 359 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 NFIXQ14938 502 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 PPP1R2P3Q6NXS1 205 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 OSBP2Q969R2 916 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 ANTXR1Q9H6X2 564 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 RFX7Q2KHR2 1363 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 PFKFB1P16118 471 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 RCAN1P53805 252 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 RNF216Q9NWF9 866 aaPredicted RBP12.16□□□□□ -0.46
SCN1B-208ENST00000640135 KIAA1468Q9P260 1216 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 M0R2C6 588 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 PPP6R2O75170 966 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 SEPT2Q15019 361 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 KCTD1Q719H9 257 aa12.16□□□□□ -0.46
SCN1B-208ENST00000640135 PDZD4Q76G19 769 aaPredicted RBP12.16□□□□□ -0.46
SCN1B-208ENST00000640135 TLR3O15455 904 aaKnown RBP12.15□□□□□ -0.46
SCN1B-208ENST00000640135 ARHGAP6O43182 974 aa12.15□□□□□ -0.46
SCN1B-208ENST00000640135 RAB3IL1Q8TBN0 382 aa12.15□□□□□ -0.46
SCN1B-208ENST00000640135 STRBPQ96SI9 672 aaKnown RBP12.15□□□□□ -0.46
SCN1B-208ENST00000640135 HERC5Q9UII4 1024 aaKnown RBP12.15□□□□□ -0.46
SCN1B-208ENST00000640135 SH2B2O14492 632 aaPredicted RBP12.15□□□□□ -0.46
SCN1B-208ENST00000640135 PSAPP07602 524 aa12.15□□□□□ -0.46
SCN1B-208ENST00000640135 ATP5DP30049 168 aa12.15□□□□□ -0.46
SCN1B-208ENST00000640135 SH3GLB2Q9NR46 395 aa12.15□□□□□ -0.46
SCN1B-208ENST00000640135 FEM1BQ9UK73 627 aa12.15□□□□□ -0.46
SCN1B-208ENST00000640135 ZHX1Q9UKY1 873 aaPredicted RBP12.15□□□□□ -0.46
SCN1B-208ENST00000640135 RIPOR2Q9Y4F9 1068 aa12.15□□□□□ -0.46
SCN1B-208ENST00000640135 PNPLA6Q8IY17 1366 aa12.15□□□□□ -0.46
SCN1B-208ENST00000640135 CYP2J2P51589 502 aa12.15□□□□□ -0.46
SCN1B-208ENST00000640135 ALCAMQ13740 583 aa12.15□□□□□ -0.46
SCN1B-208ENST00000640135 CMTR1Q8N1G2 835 aaKnown RBP12.15□□□□□ -0.46
SCN1B-208ENST00000640135 PLCD3Q8N3E9 789 aa12.15□□□□□ -0.46
SCN1B-208ENST00000640135 PUS7LQ9H0K6 701 aaKnown RBP12.15□□□□□ -0.46
SCN1B-208ENST00000640135 TMEM206Q9H813 350 aa12.15□□□□□ -0.46
SCN1B-208ENST00000640135 NUB1Q9Y5A7 615 aa12.15□□□□□ -0.46
SCN1B-208ENST00000640135 ZSCAN20P17040 1043 aaPredicted RBP12.14□□□□□ -0.47
SCN1B-208ENST00000640135 COA7Q96BR5 231 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 USP28Q96RU2 1077 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 PIH1D3Q9NQM4 214 aaKnown RBP12.14□□□□□ -0.47
SCN1B-208ENST00000640135 ZNF277Q9NRM2 450 aaPredicted RBP12.14□□□□□ -0.47
SCN1B-208ENST00000640135 TAB2Q9NYJ8 693 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 LRFN2Q9ULH4 789 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 GNAT1P11488 350 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 SND1Q7KZF4 910 aaKnown RBP eCLIP12.14□□□□□ -0.47
SCN1B-208ENST00000640135 ZNF526Q8TF50 670 aaPredicted RBP12.14□□□□□ -0.47
SCN1B-208ENST00000640135 CACTINQ8WUQ7 758 aaKnown RBP12.14□□□□□ -0.47
SCN1B-208ENST00000640135 SECISBP2LQ93073 1101 aaKnown RBP12.14□□□□□ -0.47
SCN1B-208ENST00000640135 GSDMAQ96QA5 445 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 PLA2G12BQ9BX93 195 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 SEPT9Q9UHD8 586 aaPredicted RBP12.14□□□□□ -0.47
SCN1B-208ENST00000640135 CEP170BQ9Y4F5 1589 aaPredicted RBP12.14□□□□□ -0.47
SCN1B-208ENST00000640135 KARSQ15046 597 aaKnown RBP12.14□□□□□ -0.47
SCN1B-208ENST00000640135 SURF1Q15526 300 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 KRBA2Q6ZNG9 492 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 CCDC63Q8NA47 563 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 FAM167AQ96KS9 214 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 MTMR6Q9Y217 621 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 DYNC1I1O14576 645 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 SLC39A14Q15043 492 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 PPP2R5EQ16537 467 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 CDC37Q16543 378 aaPredicted RBP12.14□□□□□ -0.47
SCN1B-208ENST00000640135 MIGA2Q7L4E1 593 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 LARP4BQ92615 738 aaKnown RBP12.14□□□□□ -0.47
SCN1B-208ENST00000640135 PIGSQ96S52 555 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 NAPGQ99747 312 aaPredicted RBP12.14□□□□□ -0.47
SCN1B-208ENST00000640135 BLZF1Q9H2G9 400 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 ZNRF3Q9ULT6 936 aa12.14□□□□□ -0.47
SCN1B-208ENST00000640135 IVLP07476 585 aa12.13□□□□□ -0.47
SCN1B-208ENST00000640135 SCRN1Q12765 414 aa12.13□□□□□ -0.47
SCN1B-208ENST00000640135 HADHQ16836 314 aaKnown RBP12.13□□□□□ -0.47
SCN1B-208ENST00000640135 STAG1Q8WVM7 1258 aa12.13□□□□□ -0.47
SCN1B-208ENST00000640135 CELF1Q92879 486 aaKnown RBP12.13□□□□□ -0.47
SCN1B-208ENST00000640135 IFT122Q9HBG6 1241 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms