RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 SAMSN1Q9NSI8 373 aaKnown RBP13.86□□□□□ -0.19
SPIN3-236ENST00000640131 LAMB1P07942 1786 aa13.86□□□□□ -0.19
SPIN3-236ENST00000640131 KIAA1551Q9HCM1 1747 aa13.86□□□□□ -0.19
SPIN3-236ENST00000640131 THSD7AQ9UPZ6 1657 aa13.86□□□□□ -0.19
SPIN3-236ENST00000640131 ACTN4O43707 911 aaKnown RBP13.86□□□□□ -0.19
SPIN3-236ENST00000640131 FGRP09769 529 aa13.86□□□□□ -0.19
SPIN3-236ENST00000640131 CALM1P0DP23 149 aa13.86□□□□□ -0.19
SPIN3-236ENST00000640131 CALM2P0DP24 149 aa13.86□□□□□ -0.19
SPIN3-236ENST00000640131 CALM3P0DP25 149 aa13.86□□□□□ -0.19
SPIN3-236ENST00000640131 MDM2Q00987 491 aaPredicted RBP13.86□□□□□ -0.19
SPIN3-236ENST00000640131 RBBP5Q15291 538 aaKnown RBP13.86□□□□□ -0.19
SPIN3-236ENST00000640131 UIMC1Q96RL1 719 aa13.86□□□□□ -0.19
SPIN3-236ENST00000640131 PDE11AQ9HCR9 933 aa13.86□□□□□ -0.19
SPIN3-236ENST00000640131 TRPC5Q9UL62 973 aaPredicted RBP13.86□□□□□ -0.19
SPIN3-236ENST00000640131 NFE2L3Q9Y4A8 694 aa13.86□□□□□ -0.19
SPIN3-236ENST00000640131 SPATA31A6Q5VVP1 1343 aa13.85□□□□□ -0.19
SPIN3-236ENST00000640131 EFCAB8A8MWE9 144 aa13.85□□□□□ -0.19
SPIN3-236ENST00000640131 GCKP35557 465 aa13.85□□□□□ -0.19
SPIN3-236ENST00000640131 RPS6KA3P51812 740 aa13.85□□□□□ -0.19
SPIN3-236ENST00000640131 TBC1D16Q8TBP0 767 aa13.85□□□□□ -0.19
SPIN3-236ENST00000640131 UBA5Q9GZZ9 404 aa13.85□□□□□ -0.19
SPIN3-236ENST00000640131 CEP131Q9UPN4 1083 aa13.85□□□□□ -0.19
SPIN3-236ENST00000640131 FAN1Q9Y2M0 1017 aa13.85□□□□□ -0.19
SPIN3-236ENST00000640131 FRMPD2Q68DX3 1309 aaPredicted RBP13.85□□□□□ -0.19
SPIN3-236ENST00000640131 CYTH3O43739 400 aa13.85□□□□□ -0.19
SPIN3-236ENST00000640131 AMOTL1Q8IY63 956 aa13.85□□□□□ -0.19
SPIN3-236ENST00000640131 MICAL1Q8TDZ2 1067 aa13.85□□□□□ -0.19
SPIN3-236ENST00000640131 RBM17Q96I25 401 aaKnown RBP13.85□□□□□ -0.19
SPIN3-236ENST00000640131 TMEM47Q9BQJ4 181 aa13.85□□□□□ -0.19
SPIN3-236ENST00000640131 CARD6Q9BX69 1037 aa13.85□□□□□ -0.19
SPIN3-236ENST00000640131 SUDS3Q9H7L9 328 aaPredicted RBP13.85□□□□□ -0.19
SPIN3-236ENST00000640131 LY75O60449 1722 aa13.85□□□□□ -0.19
SPIN3-236ENST00000640131 RTN2O75298 545 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 SFPQP23246 707 aaKnown RBP eCLIP13.84□□□□□ -0.19
SPIN3-236ENST00000640131 ATP2B2Q01814 1243 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 IL17AQ16552 155 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 INF2Q27J81 1249 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 RASSF8Q8NHQ8 419 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 ZKSCAN4Q969J2 545 aaPredicted RBP13.84□□□□□ -0.19
SPIN3-236ENST00000640131 CABS1Q96KC9 395 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 CD248Q9HCU0 757 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 SNUPNO95149 360 aaKnown RBP13.84□□□□□ -0.19
SPIN3-236ENST00000640131 RASA1P20936 1047 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 PFKFB3Q16875 520 aaPredicted RBP13.84□□□□□ -0.19
SPIN3-236ENST00000640131 SBK1Q52WX2 424 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 FAM177A1Q8N128 213 aaPredicted RBP13.84□□□□□ -0.19
SPIN3-236ENST00000640131 PROM2Q8N271 834 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 MED15Q96RN5 788 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 EYA3Q99504 573 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 CD44P16070 742 aaKnown RBP13.84□□□□□ -0.19
SPIN3-236ENST00000640131 CDK8P49336 464 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 CACNB3P54284 484 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 LONRF2Q1L5Z9 754 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 PREPLQ4J6C6 727 aaPredicted RBP13.84□□□□□ -0.19
SPIN3-236ENST00000640131 LRRC47Q8N1G4 583 aaKnown RBP13.84□□□□□ -0.19
SPIN3-236ENST00000640131 TNFRSF25Q93038 417 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 MTA3Q9BTC8 594 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 KIF9Q9HAQ2 790 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 KCNQ5Q9NR82 932 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 MAD2L2Q9UI95 211 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 PCDHAC2Q9Y5I4 1007 aa13.84□□□□□ -0.19
SPIN3-236ENST00000640131 ZNF831Q5JPB2 1677 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 FRMD3A2A2Y4 597 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 FAM196BA6NMK8 535 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 IBSPP21815 317 aaPredicted RBP13.83□□□□□ -0.2
SPIN3-236ENST00000640131 ICA1Q05084 483 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 MCM6Q14566 821 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 PARD3BQ8TEW8 1205 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 KCND1Q9NSA2 647 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 FLT1P17948 1338 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 FAM237AA0A1B0GTK4 181 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 A0A1B0GUA9 196 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 POLRMTO00411 1230 aaKnown RBP13.83□□□□□ -0.2
SPIN3-236ENST00000640131 CHUKO15111 745 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 KIF5BP33176 963 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 CLNS1AP54105 237 aaKnown RBP13.83□□□□□ -0.2
SPIN3-236ENST00000640131 SNX1Q13596 522 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 KARSQ15046 597 aaKnown RBP13.83□□□□□ -0.2
SPIN3-236ENST00000640131 TXNRD1Q16881 649 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 TBC1D25Q3MII6 688 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 KRT27Q7Z3Y8 459 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 RPUSD2Q8IZ73 545 aaKnown RBP13.83□□□□□ -0.2
SPIN3-236ENST00000640131 GPR161Q8N6U8 529 aaKnown RBP13.83□□□□□ -0.2
SPIN3-236ENST00000640131 EEF2KMTQ96G04 330 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 PAGE5Q96GU1 130 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 BPIFA3Q9BQP9 254 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 INTS13Q9NVM9 706 aa13.83□□□□□ -0.2
SPIN3-236ENST00000640131 UBR3Q6ZT12 1888 aa13.82□□□□□ -0.2
SPIN3-236ENST00000640131 FAM163BP0C2L3 166 aa13.82□□□□□ -0.2
SPIN3-236ENST00000640131 MRPL12P52815 198 aaKnown RBP13.82□□□□□ -0.2
SPIN3-236ENST00000640131 RCAN1P53805 252 aa13.82□□□□□ -0.2
SPIN3-236ENST00000640131 GSTO1P78417 241 aa13.82□□□□□ -0.2
SPIN3-236ENST00000640131 CC2D2BQ6DHV5 1058 aa13.82□□□□□ -0.2
SPIN3-236ENST00000640131 BLIDQ8IZY5 108 aa13.82□□□□□ -0.2
SPIN3-236ENST00000640131 CPLX3Q8WVH0 158 aa13.82□□□□□ -0.2
SPIN3-236ENST00000640131 CEP95Q96GE4 821 aa13.82□□□□□ -0.2
SPIN3-236ENST00000640131 PPP1R13BQ96KQ4 1090 aa13.82□□□□□ -0.2
SPIN3-236ENST00000640131 KDM4CQ9H3R0 1056 aa13.82□□□□□ -0.2
SPIN3-236ENST00000640131 NAV1Q8NEY1 1877 aa13.82□□□□□ -0.2
SPIN3-236ENST00000640131 KLRF2D3W0D1 207 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms