RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 RALYLQ86SE5 291 aaKnown RBP19.6■□□□□ 0.73
CACNA1A-259ENST00000638114 SKAP1Q86WV1 359 aa19.6■□□□□ 0.73
CACNA1A-259ENST00000638114 ATP11BQ9Y2G3 1177 aa19.6■□□□□ 0.73
CACNA1A-259ENST00000638114 RANBP2P49792 3224 aaKnown RBP19.59■□□□□ 0.73
CACNA1A-259ENST00000638114 ASTN1O14525 1302 aa19.59■□□□□ 0.73
CACNA1A-259ENST00000638114 PTPDC1A2A3K4 754 aa19.59■□□□□ 0.73
CACNA1A-259ENST00000638114 ADAMTS4O75173 837 aa19.59■□□□□ 0.73
CACNA1A-259ENST00000638114 DUSP11O75319 330 aaKnown RBP19.59■□□□□ 0.73
CACNA1A-259ENST00000638114 PARP1P09874 1014 aaKnown RBP19.59■□□□□ 0.73
CACNA1A-259ENST00000638114 FXR1P51114 621 aaKnown RBP eCLIP19.59■□□□□ 0.73
CACNA1A-259ENST00000638114 BAATQ14032 418 aaPredicted RBP19.59■□□□□ 0.73
CACNA1A-259ENST00000638114 KIAA1211Q6ZU35 1233 aa19.59■□□□□ 0.73
CACNA1A-259ENST00000638114 MAP4K1Q92918 833 aa19.59■□□□□ 0.73
CACNA1A-259ENST00000638114 PCDH10Q9P2E7 1040 aa19.59■□□□□ 0.73
CACNA1A-259ENST00000638114 PHF24Q9UPV7 400 aa19.59■□□□□ 0.73
CACNA1A-259ENST00000638114 TAF6LQ9Y6J9 622 aa19.59■□□□□ 0.73
CACNA1A-259ENST00000638114 LCTP09848 1927 aa19.59■□□□□ 0.73
CACNA1A-259ENST00000638114 E7EWF7 191 aa19.58■□□□□ 0.72
CACNA1A-259ENST00000638114 DHX16O60231 1041 aaKnown RBP19.58■□□□□ 0.72
CACNA1A-259ENST00000638114 MAGEA10P43363 369 aaPredicted RBP19.58■□□□□ 0.72
CACNA1A-259ENST00000638114 SEC23AQ15436 765 aa19.58■□□□□ 0.72
CACNA1A-259ENST00000638114 CDC37Q16543 378 aaPredicted RBP19.58■□□□□ 0.72
CACNA1A-259ENST00000638114 USH1GQ495M9 461 aa19.58■□□□□ 0.72
CACNA1A-259ENST00000638114 ADGRF4Q8IZF3 695 aa19.58■□□□□ 0.72
CACNA1A-259ENST00000638114 NCOA7Q8NI08 942 aa19.58■□□□□ 0.72
CACNA1A-259ENST00000638114 CLEC4DQ8WXI8 215 aa19.58■□□□□ 0.72
CACNA1A-259ENST00000638114 PURBQ96QR8 312 aaKnown RBP19.58■□□□□ 0.72
CACNA1A-259ENST00000638114 GDF15Q99988 308 aa19.58■□□□□ 0.72
CACNA1A-259ENST00000638114 KATNBL1Q9H079 304 aa19.58■□□□□ 0.72
CACNA1A-259ENST00000638114 RBM8AQ9Y5S9 174 aaKnown RBP19.58■□□□□ 0.72
CACNA1A-259ENST00000638114 DDX49Q9Y6V7 483 aaKnown RBP19.58■□□□□ 0.72
CACNA1A-259ENST00000638114 LRRC37A2A6NM11 1700 aa19.57■□□□□ 0.72
CACNA1A-259ENST00000638114 ERICH2A1L162 156 aa19.57■□□□□ 0.72
CACNA1A-259ENST00000638114 IFIT3O14879 490 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-259ENST00000638114 ADCY6O43306 1168 aa19.57■□□□□ 0.72
CACNA1A-259ENST00000638114 CALML3P27482 149 aa19.57■□□□□ 0.72
CACNA1A-259ENST00000638114 TRIM60Q495X7 471 aa19.57■□□□□ 0.72
CACNA1A-259ENST00000638114 SLC30A10Q6XR72 485 aa19.57■□□□□ 0.72
CACNA1A-259ENST00000638114 STOX1Q6ZVD7 989 aa19.57■□□□□ 0.72
CACNA1A-259ENST00000638114 ESYT1Q9BSJ8 1104 aa19.57■□□□□ 0.72
CACNA1A-259ENST00000638114 SPC25Q9HBM1 224 aa19.57■□□□□ 0.72
CACNA1A-259ENST00000638114 ADD3Q9UEY8 706 aaKnown RBP19.57■□□□□ 0.72
CACNA1A-259ENST00000638114 A0A1W2PQ45 241 aaPredicted RBP19.56■□□□□ 0.72
CACNA1A-259ENST00000638114 A0A1W2PQY0 241 aa19.56■□□□□ 0.72
CACNA1A-259ENST00000638114 C6orf222P0C671 652 aaPredicted RBP19.56■□□□□ 0.72
CACNA1A-259ENST00000638114 SNX17Q15036 470 aa19.56■□□□□ 0.72
CACNA1A-259ENST00000638114 BMP2KLQ5H9B9 411 aa19.56■□□□□ 0.72
CACNA1A-259ENST00000638114 RNF207Q6ZRF8 634 aa19.56■□□□□ 0.72
CACNA1A-259ENST00000638114 NOL8Q76FK4 1167 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-259ENST00000638114 EEPD1Q7L9B9 569 aa19.56■□□□□ 0.72
CACNA1A-259ENST00000638114 FBXO16Q8IX29 292 aaPredicted RBP19.56■□□□□ 0.72
CACNA1A-259ENST00000638114 TSEN34Q9BSV6 310 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-259ENST00000638114 VAT1LQ9HCJ6 419 aa19.56■□□□□ 0.72
CACNA1A-259ENST00000638114 PRKAG2Q9UGJ0 569 aa19.56■□□□□ 0.72
CACNA1A-259ENST00000638114 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-259ENST00000638114 A0A1W2PPC1 479 aa19.55■□□□□ 0.72
CACNA1A-259ENST00000638114 MYADML2A6NDP7 307 aa19.55■□□□□ 0.72
CACNA1A-259ENST00000638114 BMP8BP34820 402 aa19.55■□□□□ 0.72
CACNA1A-259ENST00000638114 ALDH5A1P51649 535 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-259ENST00000638114 ACLYP53396 1101 aa19.55■□□□□ 0.72
CACNA1A-259ENST00000638114 RPS6P62753 249 aaKnown RBP19.55■□□□□ 0.72
CACNA1A-259ENST00000638114 IRX5P78411 483 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-259ENST00000638114 TNFAIP2Q03169 654 aa19.55■□□□□ 0.72
CACNA1A-259ENST00000638114 SART3Q15020 963 aaKnown RBP19.55■□□□□ 0.72
CACNA1A-259ENST00000638114 KCNA10Q16322 511 aa19.55■□□□□ 0.72
CACNA1A-259ENST00000638114 CHST3Q7LGC8 479 aa19.55■□□□□ 0.72
CACNA1A-259ENST00000638114 KLHDC9Q8NEP7 349 aa19.55■□□□□ 0.72
CACNA1A-259ENST00000638114 LSG1Q9H089 658 aaKnown RBP19.55■□□□□ 0.72
CACNA1A-259ENST00000638114 MOXD2PA6NHM9 499 aa19.54■□□□□ 0.72
CACNA1A-259ENST00000638114 GJA9P57773 515 aa19.54■□□□□ 0.72
CACNA1A-259ENST00000638114 MDM2Q00987 491 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-259ENST00000638114 WTAPQ15007 396 aa19.54■□□□□ 0.72
CACNA1A-259ENST00000638114 QRICH1Q2TAL8 776 aa19.54■□□□□ 0.72
CACNA1A-259ENST00000638114 STAG2Q8N3U4 1231 aa19.54■□□□□ 0.72
CACNA1A-259ENST00000638114 CCDC136Q96JN2 1154 aa19.54■□□□□ 0.72
CACNA1A-259ENST00000638114 LBHD1Q9BQE6 289 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-259ENST00000638114 UBE2OQ9C0C9 1292 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-259ENST00000638114 UPF3AQ9H1J1 476 aaKnown RBP19.54■□□□□ 0.72
CACNA1A-259ENST00000638114 VTA1Q9NP79 307 aa19.54■□□□□ 0.72
CACNA1A-259ENST00000638114 PRDM5Q9NQX1 630 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-259ENST00000638114 MYH6P13533 1939 aa19.54■□□□□ 0.72
CACNA1A-259ENST00000638114 ABCB11O95342 1321 aa19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 KLRF2D3W0D1 207 aa19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 CST5P28325 142 aaPredicted RBP19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 TMEM67Q5HYA8 995 aa19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 GNASQ5JWF2 1037 aa19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 C1orf53Q5VUE5 145 aa19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 CCSAPQ6IQ19 270 aaPredicted RBP19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 FBXO11Q86XK2 927 aa19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 PCSK9Q8NBP7 692 aaKnown RBP19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 MORC4Q8TE76 937 aa19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 NUP133Q8WUM0 1156 aa19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 JMJD4Q9H9V9 463 aa19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 ANO2Q9NQ90 1003 aa19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 STARD7Q9NQZ5 370 aa19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 PDGFCQ9NRA1 345 aa19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 MAD2L2Q9UI95 211 aa19.53■□□□□ 0.72
CACNA1A-259ENST00000638114 LOC102724159A0A0B4J2E5 919 aa19.52■□□□□ 0.72
CACNA1A-259ENST00000638114 ANTXR2P58335 489 aa19.52■□□□□ 0.72
CACNA1A-259ENST00000638114 TLE2Q04725 743 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms