RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 ADGRG1Q9Y653 693 aa17.49■□□□□ 0.39
CLN5-218ENST00000637397 SNAP23O00161 211 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 IFT88Q13099 833 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 EFCAB13Q8IY85 973 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 TTLL11Q8NHH1 800 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 GGA1Q9UJY5 639 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 NEDD4P46934 1319 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 PLEKHA8P1O95397 391 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 BIRC3Q13489 604 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 MTF1Q14872 753 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 OXER1Q8TDS5 423 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 SMC6Q96SB8 1091 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 TADA3O75528 432 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 CCDC169A6NNP5 214 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 EIF4A3P38919 411 aaKnown RBP17.48■□□□□ 0.39
CLN5-218ENST00000637397 UAP1Q16222 522 aaPredicted RBP17.48■□□□□ 0.39
CLN5-218ENST00000637397 ANKRD42Q8N9B4 389 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 CCDC63Q8NA47 563 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 KIFAP3Q92845 792 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 ATP8A2Q9NTI2 1148 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 ABHD10Q9NUJ1 306 aa17.48■□□□□ 0.39
CLN5-218ENST00000637397 A2ML1A8K2U0 1454 aa17.47■□□□□ 0.39
CLN5-218ENST00000637397 CUL4BQ13620 913 aa17.47■□□□□ 0.39
CLN5-218ENST00000637397 CCDC170Q8IYT3 715 aa17.47■□□□□ 0.39
CLN5-218ENST00000637397 LARP4BQ92615 738 aaKnown RBP17.47■□□□□ 0.39
CLN5-218ENST00000637397 CUEDC2Q9H467 287 aa17.47■□□□□ 0.39
CLN5-218ENST00000637397 STIM2Q9P246 746 aa17.47■□□□□ 0.39
CLN5-218ENST00000637397 SPATS2Q86XZ4 545 aaKnown RBP17.47■□□□□ 0.39
CLN5-218ENST00000637397 LRRC47Q8N1G4 583 aaKnown RBP17.47■□□□□ 0.39
CLN5-218ENST00000637397 SMCR8Q8TEV9 937 aaPredicted RBP17.47■□□□□ 0.39
CLN5-218ENST00000637397 PLCB1Q9NQ66 1216 aa17.47■□□□□ 0.39
CLN5-218ENST00000637397 CYP27B1O15528 508 aa17.47■□□□□ 0.39
CLN5-218ENST00000637397 BCRP11274 1271 aa17.47■□□□□ 0.39
CLN5-218ENST00000637397 CCNE1P24864 410 aa17.47■□□□□ 0.39
CLN5-218ENST00000637397 APBA1Q02410 837 aa17.47■□□□□ 0.39
CLN5-218ENST00000637397 MB21D1Q8N884 522 aa17.47■□□□□ 0.39
CLN5-218ENST00000637397 A0A087WUV0 522 aaPredicted RBP17.47■□□□□ 0.39
CLN5-218ENST00000637397 FTCDO95954 541 aa17.47■□□□□ 0.39
CLN5-218ENST00000637397 MAGEF1Q9HAY2 307 aa17.47■□□□□ 0.39
CLN5-218ENST00000637397 AXIN2Q9Y2T1 843 aa17.47■□□□□ 0.39
CLN5-218ENST00000637397 ABCC12Q96J65 1359 aa17.47■□□□□ 0.39
CLN5-218ENST00000637397 KDM3AQ9Y4C1 1321 aa17.46■□□□□ 0.39
CLN5-218ENST00000637397 MAN2A1Q16706 1144 aa17.46■□□□□ 0.39
CLN5-218ENST00000637397 FNBP4Q8N3X1 1017 aaPredicted RBP17.46■□□□□ 0.39
CLN5-218ENST00000637397 VEZTQ9HBM0 779 aa17.46■□□□□ 0.39
CLN5-218ENST00000637397 DDX39AO00148 427 aaKnown RBP17.46■□□□□ 0.39
CLN5-218ENST00000637397 PCK1P35558 622 aa17.46■□□□□ 0.39
CLN5-218ENST00000637397 TRAPPC3LQ5T215 181 aa17.46■□□□□ 0.39
CLN5-218ENST00000637397 USPL1Q5W0Q7 1092 aa17.46■□□□□ 0.39
CLN5-218ENST00000637397 CERS3Q8IU89 383 aa17.46■□□□□ 0.39
CLN5-218ENST00000637397 OGFOD1Q8N543 542 aa17.46■□□□□ 0.39
CLN5-218ENST00000637397 PSTPIP2Q9H939 334 aa17.46■□□□□ 0.39
CLN5-218ENST00000637397 MRFAP1Q9Y605 127 aa17.46■□□□□ 0.39
CLN5-218ENST00000637397 CYP2J2P51589 502 aa17.46■□□□□ 0.39
CLN5-218ENST00000637397 DPH6Q7L8W6 267 aa17.46■□□□□ 0.39
CLN5-218ENST00000637397 TPH2Q8IWU9 490 aa17.46■□□□□ 0.39
CLN5-218ENST00000637397 UBN2Q6ZU65 1347 aa17.46■□□□□ 0.39
CLN5-218ENST00000637397 METTL16Q86W50 562 aaKnown RBP17.46■□□□□ 0.38
CLN5-218ENST00000637397 ZNF579Q8NAF0 562 aaKnown RBP17.46■□□□□ 0.38
CLN5-218ENST00000637397 TRIM49BA6NDI0 452 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 SYNE4Q8N205 404 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.45■□□□□ 0.38
CLN5-218ENST00000637397 AK9Q5TCS8 1911 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 RFX7Q2KHR2 1363 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 CFBP00751 764 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 HMGB2P26583 209 aaKnown RBP17.45■□□□□ 0.38
CLN5-218ENST00000637397 FNBP1Q96RU3 617 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 LAD1O00515 517 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 SEMA3EO15041 775 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 AP5Z1O43299 807 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 TCP10Q12799 353 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 NNTQ13423 1086 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 PRR16Q569H4 304 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 THAP9Q9H5L6 903 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 LY9Q9HBG7 655 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 DDX25Q9UHL0 483 aaKnown RBP17.45■□□□□ 0.38
CLN5-218ENST00000637397 FAM184BQ9ULE4 1060 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 STK38LQ9Y2H1 464 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 ARHGEF40Q8TER5 1519 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 ZNF609O15014 1411 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 STAMBPO95630 424 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 PLCG1P19174 1290 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 SCARF1Q14162 830 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 MFSD14BQ5SR56 506 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 AK8Q96MA6 479 aa17.45■□□□□ 0.38
CLN5-218ENST00000637397 KIF11P52732 1056 aa17.44■□□□□ 0.38
CLN5-218ENST00000637397 C8orf37Q96NL8 207 aa17.44■□□□□ 0.38
CLN5-218ENST00000637397 TACO1Q9BSH4 297 aaKnown RBP17.44■□□□□ 0.38
CLN5-218ENST00000637397 HDAC9Q9UKV0 1011 aa17.44■□□□□ 0.38
CLN5-218ENST00000637397 FKBP3Q00688 224 aaKnown RBP17.44■□□□□ 0.38
CLN5-218ENST00000637397 E2F4Q16254 413 aa17.44■□□□□ 0.38
CLN5-218ENST00000637397 EXOC3L4Q17RC7 722 aa17.44■□□□□ 0.38
CLN5-218ENST00000637397 WDR44Q5JSH3 913 aa17.44■□□□□ 0.38
CLN5-218ENST00000637397 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.44■□□□□ 0.38
CLN5-218ENST00000637397 KIAA1024Q9UPX6 916 aa17.44■□□□□ 0.38
CLN5-218ENST00000637397 ATP2A2P16615 1042 aaKnown RBP17.44■□□□□ 0.38
CLN5-218ENST00000637397 TBCKQ8TEA7 893 aa17.44■□□□□ 0.38
CLN5-218ENST00000637397 GJA10Q969M2 543 aa17.44■□□□□ 0.38
CLN5-218ENST00000637397 DISC1Q9NRI5 854 aa17.44■□□□□ 0.38
CLN5-218ENST00000637397 PCDHA13Q9Y5I0 950 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms