RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 E7EWF7 191 aa16.13■□□□□ 0.17
PNKP-228ENST00000637325 IFIT3O14879 490 aaKnown RBP16.13■□□□□ 0.17
PNKP-228ENST00000637325 PGK1P00558 417 aa16.13■□□□□ 0.17
PNKP-228ENST00000637325 SART3Q15020 963 aaKnown RBP16.13■□□□□ 0.17
PNKP-228ENST00000637325 BMP2KLQ5H9B9 411 aa16.13■□□□□ 0.17
PNKP-228ENST00000637325 ESYT1Q9BSJ8 1104 aa16.13■□□□□ 0.17
PNKP-228ENST00000637325 CPVLQ9H3G5 476 aa16.13■□□□□ 0.17
PNKP-228ENST00000637325 SYN1P17600 705 aa16.12■□□□□ 0.17
PNKP-228ENST00000637325 ADCYAP1R1P41586 468 aa16.12■□□□□ 0.17
PNKP-228ENST00000637325 BAATQ14032 418 aaPredicted RBP16.12■□□□□ 0.17
PNKP-228ENST00000637325 SEC23AQ15436 765 aa16.12■□□□□ 0.17
PNKP-228ENST00000637325 CCDC144BQ3MJ40 725 aa16.12■□□□□ 0.17
PNKP-228ENST00000637325 USH1GQ495M9 461 aa16.12■□□□□ 0.17
PNKP-228ENST00000637325 CASC1Q6TDU7 716 aa16.12■□□□□ 0.17
PNKP-228ENST00000637325 FERMT2Q96AC1 680 aa16.12■□□□□ 0.17
PNKP-228ENST00000637325 LENG1Q96BZ8 264 aaPredicted RBP16.12■□□□□ 0.17
PNKP-228ENST00000637325 SPC25Q9HBM1 224 aa16.12■□□□□ 0.17
PNKP-228ENST00000637325 VAT1LQ9HCJ6 419 aa16.12■□□□□ 0.17
PNKP-228ENST00000637325 ADD3Q9UEY8 706 aaKnown RBP16.12■□□□□ 0.17
PNKP-228ENST00000637325 WDR19Q8NEZ3 1342 aa16.12■□□□□ 0.17
PNKP-228ENST00000637325 NFIBO00712 420 aa16.11■□□□□ 0.17
PNKP-228ENST00000637325 DUSP11O75319 330 aaKnown RBP16.11■□□□□ 0.17
PNKP-228ENST00000637325 CALML3P27482 149 aa16.11■□□□□ 0.17
PNKP-228ENST00000637325 RTP1P59025 263 aa16.11■□□□□ 0.17
PNKP-228ENST00000637325 WTAPQ15007 396 aa16.11■□□□□ 0.17
PNKP-228ENST00000637325 CDC37Q16543 378 aaPredicted RBP16.11■□□□□ 0.17
PNKP-228ENST00000637325 SLC39A5Q6ZMH5 540 aa16.11■□□□□ 0.17
PNKP-228ENST00000637325 RNF207Q6ZRF8 634 aa16.11■□□□□ 0.17
PNKP-228ENST00000637325 NOL8Q76FK4 1167 aaKnown RBP16.11■□□□□ 0.17
PNKP-228ENST00000637325 CHST3Q7LGC8 479 aa16.11■□□□□ 0.17
PNKP-228ENST00000637325 ADGRF4Q8IZF3 695 aa16.11■□□□□ 0.17
PNKP-228ENST00000637325 ANO2Q9NQ90 1003 aa16.11■□□□□ 0.17
PNKP-228ENST00000637325 RBM27Q9P2N5 1060 aaKnown RBP16.11■□□□□ 0.17
PNKP-228ENST00000637325 TMEM67Q5HYA8 995 aa16.1■□□□□ 0.17
PNKP-228ENST00000637325 STOX1Q6ZVD7 989 aa16.1■□□□□ 0.17
PNKP-228ENST00000637325 CLEC4DQ8WXI8 215 aa16.1■□□□□ 0.17
PNKP-228ENST00000637325 MPHOSPH6Q99547 160 aaKnown RBP16.1■□□□□ 0.17
PNKP-228ENST00000637325 LSG1Q9H089 658 aaKnown RBP16.1■□□□□ 0.17
PNKP-228ENST00000637325 PRKAG2Q9UGJ0 569 aa16.1■□□□□ 0.17
PNKP-228ENST00000637325 ATP11BQ9Y2G3 1177 aa16.1■□□□□ 0.17
PNKP-228ENST00000637325 TAF6LQ9Y6J9 622 aa16.1■□□□□ 0.17
PNKP-228ENST00000637325 LRRC37A2A6NM11 1700 aa16.09■□□□□ 0.17
PNKP-228ENST00000637325 KLRF2D3W0D1 207 aa16.09■□□□□ 0.17
PNKP-228ENST00000637325 C6orf222P0C671 652 aaPredicted RBP16.09■□□□□ 0.17
PNKP-228ENST00000637325 TNFAIP2Q03169 654 aa16.09■□□□□ 0.17
PNKP-228ENST00000637325 EEPD1Q7L9B9 569 aa16.09■□□□□ 0.17
PNKP-228ENST00000637325 CATIPQ7Z7H3 387 aa16.09■□□□□ 0.17
PNKP-228ENST00000637325 PURBQ96QR8 312 aaKnown RBP16.09■□□□□ 0.17
PNKP-228ENST00000637325 TSEN34Q9BSV6 310 aaKnown RBP16.09■□□□□ 0.17
PNKP-228ENST00000637325 PHF24Q9UPV7 400 aa16.09■□□□□ 0.17
PNKP-228ENST00000637325 ABCB11O95342 1321 aa16.09■□□□□ 0.17
PNKP-228ENST00000637325 SYNRGQ9UMZ2 1314 aa16.09■□□□□ 0.17
PNKP-228ENST00000637325 ADAMTS4O75173 837 aa16.08■□□□□ 0.16
PNKP-228ENST00000637325 ALDH5A1P51649 535 aaPredicted RBP16.08■□□□□ 0.16
PNKP-228ENST00000637325 QRICH1Q2TAL8 776 aa16.08■□□□□ 0.16
PNKP-228ENST00000637325 SLC30A10Q6XR72 485 aa16.08■□□□□ 0.16
PNKP-228ENST00000637325 FBXO11Q86XK2 927 aa16.08■□□□□ 0.16
PNKP-228ENST00000637325 STAG2Q8N3U4 1231 aa16.08■□□□□ 0.16
PNKP-228ENST00000637325 PCSK9Q8NBP7 692 aaKnown RBP16.08■□□□□ 0.16
PNKP-228ENST00000637325 NUP133Q8WUM0 1156 aa16.08■□□□□ 0.16
PNKP-228ENST00000637325 KATNBL1Q9H079 304 aa16.08■□□□□ 0.16
PNKP-228ENST00000637325 JMJD4Q9H9V9 463 aa16.08■□□□□ 0.16
PNKP-228ENST00000637325 KIAA1217Q5T5P2 1943 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 LOC102724159A0A0B4J2E5 919 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 B4DLN1 442 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 SLC27A2O14975 620 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 CDC45O75419 566 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 MAGEA10P43363 369 aaPredicted RBP16.07■□□□□ 0.16
PNKP-228ENST00000637325 MRPL12P52815 198 aaKnown RBP16.07■□□□□ 0.16
PNKP-228ENST00000637325 ACLYP53396 1101 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 RPS6P62753 249 aaKnown RBP16.07■□□□□ 0.16
PNKP-228ENST00000637325 GRM4Q14833 912 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 PWP2Q15269 919 aaKnown RBP16.07■□□□□ 0.16
PNKP-228ENST00000637325 KCNA10Q16322 511 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 TRIM60Q495X7 471 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 GNASQ5JWF2 1037 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 CREB3L3Q68CJ9 461 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 IQSEC1Q6DN90 963 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 MCF2L2Q86YR7 1114 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 FBXO16Q8IX29 292 aaPredicted RBP16.07■□□□□ 0.16
PNKP-228ENST00000637325 MB21D2Q8IYB1 491 aaPredicted RBP16.07■□□□□ 0.16
PNKP-228ENST00000637325 RGS22Q8NE09 1264 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 KLHDC9Q8NEP7 349 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 VTI1AQ96AJ9 217 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 AP5M1Q9H0R1 490 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 VTA1Q9NP79 307 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 STARD7Q9NQZ5 370 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 MAD2L2Q9UI95 211 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 MRPL11Q9Y3B7 192 aaKnown RBP16.07■□□□□ 0.16
PNKP-228ENST00000637325 DDX49Q9Y6V7 483 aaKnown RBP16.07■□□□□ 0.16
PNKP-228ENST00000637325 ASTN1O14525 1302 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 MYH7BA7E2Y1 1941 aa16.07■□□□□ 0.16
PNKP-228ENST00000637325 A0A1W2PQ45 241 aaPredicted RBP16.06■□□□□ 0.16
PNKP-228ENST00000637325 A0A1W2PQY0 241 aa16.06■□□□□ 0.16
PNKP-228ENST00000637325 PALM3A6NDB9 673 aaPredicted RBP16.06■□□□□ 0.16
PNKP-228ENST00000637325 MOXD2PA6NHM9 499 aa16.06■□□□□ 0.16
PNKP-228ENST00000637325 SLC34A2O95436 690 aa16.06■□□□□ 0.16
PNKP-228ENST00000637325 MCM5P33992 734 aa16.06■□□□□ 0.16
PNKP-228ENST00000637325 GJA9P57773 515 aa16.06■□□□□ 0.16
PNKP-228ENST00000637325 PDE4DQ08499 809 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms