RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 TRIM47Q96LD4 638 aa17.94■□□□□ 0.46
CTSD-207ENST00000636571 TRERF1Q96PN7 1200 aa17.94■□□□□ 0.46
CTSD-207ENST00000636571 RNF146Q9NTX7 359 aa17.94■□□□□ 0.46
CTSD-207ENST00000636571 SEC63Q9UGP8 760 aaKnown RBP17.94■□□□□ 0.46
CTSD-207ENST00000636571 NFIBO00712 420 aa17.93■□□□□ 0.46
CTSD-207ENST00000636571 FKTNO75072 461 aa17.93■□□□□ 0.46
CTSD-207ENST00000636571 PSMC4P43686 418 aa17.93■□□□□ 0.46
CTSD-207ENST00000636571 WWC2Q6AWC2 1192 aa17.93■□□□□ 0.46
CTSD-207ENST00000636571 AMNQ9BXJ7 453 aa17.93■□□□□ 0.46
CTSD-207ENST00000636571 PCDHA1Q9Y5I3 950 aa17.93■□□□□ 0.46
CTSD-207ENST00000636571 PTPDC1A2A3K4 754 aa17.92■□□□□ 0.46
CTSD-207ENST00000636571 PRPF3O43395 683 aaKnown RBP17.92■□□□□ 0.46
CTSD-207ENST00000636571 FMNL1O95466 1100 aaPredicted RBP17.92■□□□□ 0.46
CTSD-207ENST00000636571 FDPSP14324 419 aaKnown RBP17.92■□□□□ 0.46
CTSD-207ENST00000636571 SSRP1Q08945 709 aaKnown RBP17.92■□□□□ 0.46
CTSD-207ENST00000636571 HEATR3Q7Z4Q2 680 aa17.92■□□□□ 0.46
CTSD-207ENST00000636571 GPR142Q7Z601 462 aa17.92■□□□□ 0.46
CTSD-207ENST00000636571 CLEC4DQ8WXI8 215 aa17.92■□□□□ 0.46
CTSD-207ENST00000636571 TBC1D5Q92609 795 aa17.92■□□□□ 0.46
CTSD-207ENST00000636571 RNF26Q9BY78 433 aaPredicted RBP17.92■□□□□ 0.46
CTSD-207ENST00000636571 GJB4Q9NTQ9 266 aa17.92■□□□□ 0.46
CTSD-207ENST00000636571 OPLAHO14841 1288 aa17.91■□□□□ 0.46
CTSD-207ENST00000636571 CCNA1P78396 465 aa17.91■□□□□ 0.46
CTSD-207ENST00000636571 LCTP09848 1927 aa17.91■□□□□ 0.46
CTSD-207ENST00000636571 ADAMTS3O15072 1205 aa17.91■□□□□ 0.46
CTSD-207ENST00000636571 FOSBP53539 338 aa17.91■□□□□ 0.46
CTSD-207ENST00000636571 PFKFB3Q16875 520 aaPredicted RBP17.91■□□□□ 0.46
CTSD-207ENST00000636571 CPLX2Q6PUV4 134 aaKnown RBP17.91■□□□□ 0.46
CTSD-207ENST00000636571 CCAR1Q8IX12 1150 aaKnown RBP17.91■□□□□ 0.46
CTSD-207ENST00000636571 RBBP6Q7Z6E9 1792 aaKnown RBP17.9■□□□□ 0.46
CTSD-207ENST00000636571 STXBP3O00186 592 aa17.9■□□□□ 0.46
CTSD-207ENST00000636571 TNPO2O14787 897 aaKnown RBP17.9■□□□□ 0.46
CTSD-207ENST00000636571 SLC25A27O95847 323 aa17.9■□□□□ 0.46
CTSD-207ENST00000636571 SCG2P13521 617 aa17.9■□□□□ 0.46
CTSD-207ENST00000636571 NOM1Q5C9Z4 860 aaKnown RBP17.9■□□□□ 0.46
CTSD-207ENST00000636571 SHCBP1Q8NEM2 672 aa17.9■□□□□ 0.46
CTSD-207ENST00000636571 PURBQ96QR8 312 aaKnown RBP17.9■□□□□ 0.46
CTSD-207ENST00000636571 ORC3Q9UBD5 711 aaPredicted RBP17.9■□□□□ 0.46
CTSD-207ENST00000636571 SMC3Q9UQE7 1217 aa17.9■□□□□ 0.46
CTSD-207ENST00000636571 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.9■□□□□ 0.46
CTSD-207ENST00000636571 CDKL5O76039 1030 aa17.89■□□□□ 0.45
CTSD-207ENST00000636571 PGK2P07205 417 aa17.89■□□□□ 0.45
CTSD-207ENST00000636571 MAPK4P31152 587 aa17.89■□□□□ 0.45
CTSD-207ENST00000636571 CTCFP49711 727 aaPredicted RBP17.89■□□□□ 0.45
CTSD-207ENST00000636571 AKAP17AQ02040 695 aaKnown RBP17.89■□□□□ 0.45
CTSD-207ENST00000636571 NSMFQ6X4W1 530 aa17.89■□□□□ 0.45
CTSD-207ENST00000636571 TRIM22Q8IYM9 498 aa17.89■□□□□ 0.45
CTSD-207ENST00000636571 MROH8Q9H579 483 aa17.89■□□□□ 0.45
CTSD-207ENST00000636571 ACAD9Q9H845 621 aa17.89■□□□□ 0.45
CTSD-207ENST00000636571 A1CFQ9NQ94 594 aaKnown RBP17.89■□□□□ 0.45
CTSD-207ENST00000636571 VPS54Q9P1Q0 977 aa17.89■□□□□ 0.45
CTSD-207ENST00000636571 GABRQQ9UN88 632 aa17.89■□□□□ 0.45
CTSD-207ENST00000636571 GJB2P29033 226 aa17.89■□□□□ 0.45
CTSD-207ENST00000636571 FCGRTP55899 365 aa17.89■□□□□ 0.45
CTSD-207ENST00000636571 SLC30A10Q6XR72 485 aa17.89■□□□□ 0.45
CTSD-207ENST00000636571 PLEKHH3Q7Z736 793 aa17.89■□□□□ 0.45
CTSD-207ENST00000636571 SMARCC2Q8TAQ2 1214 aa17.89■□□□□ 0.45
CTSD-207ENST00000636571 INTS4Q96HW7 963 aaKnown RBP17.89■□□□□ 0.45
CTSD-207ENST00000636571 CWC22Q9HCG8 908 aaKnown RBP17.89■□□□□ 0.45
CTSD-207ENST00000636571 PLXNA1Q9UIW2 1896 aa17.88■□□□□ 0.45
CTSD-207ENST00000636571 ABCB11O95342 1321 aa17.88■□□□□ 0.45
CTSD-207ENST00000636571 DEXIO95424 95 aa17.88■□□□□ 0.45
CTSD-207ENST00000636571 PTPREP23469 700 aa17.88■□□□□ 0.45
CTSD-207ENST00000636571 CHST13Q8NET6 341 aa17.88■□□□□ 0.45
CTSD-207ENST00000636571 ERO1AQ96HE7 468 aa17.88■□□□□ 0.45
CTSD-207ENST00000636571 MMP19Q99542 508 aa17.88■□□□□ 0.45
CTSD-207ENST00000636571 BARHL2Q9NY43 387 aa17.88■□□□□ 0.45
CTSD-207ENST00000636571 DDX49Q9Y6V7 483 aaKnown RBP17.88■□□□□ 0.45
CTSD-207ENST00000636571 STK36Q9NRP7 1315 aa17.87■□□□□ 0.45
CTSD-207ENST00000636571 BRCA2P51587 3418 aa17.87■□□□□ 0.45
CTSD-207ENST00000636571 ADORA2AP29274 412 aa17.87■□□□□ 0.45
CTSD-207ENST00000636571 HOXA13P31271 388 aaPredicted RBP17.87■□□□□ 0.45
CTSD-207ENST00000636571 NAPAP54920 295 aa17.87■□□□□ 0.45
CTSD-207ENST00000636571 PRKCZQ05513 592 aa17.87■□□□□ 0.45
CTSD-207ENST00000636571 KIF22Q14807 665 aa17.87■□□□□ 0.45
CTSD-207ENST00000636571 TKFCQ3LXA3 575 aa17.87■□□□□ 0.45
CTSD-207ENST00000636571 GJD2Q9UKL4 321 aa17.87■□□□□ 0.45
CTSD-207ENST00000636571 COBLO75128 1261 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 CFBP00751 764 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 FCER1AP12319 257 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 CNTN2Q02246 1040 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 BAATQ14032 418 aaPredicted RBP17.86■□□□□ 0.45
CTSD-207ENST00000636571 GRB14Q14449 540 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 MORN1Q5T089 497 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 ANKRD35Q8N283 1001 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 LLPHQ9BRT6 129 aaKnown RBP17.86■□□□□ 0.45
CTSD-207ENST00000636571 CYP39A1Q9NYL5 469 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 COL20A1Q9P218 1284 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 MRPL11Q9Y3B7 192 aaKnown RBP17.86■□□□□ 0.45
CTSD-207ENST00000636571 IVNS1ABPQ9Y6Y0 642 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 CALML3P27482 149 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 RPS6P62753 249 aaKnown RBP17.86■□□□□ 0.45
CTSD-207ENST00000636571 KCTD2Q14681 263 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 UBE2SQ16763 222 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 USP17L6PQ6QN14 398 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 OTOP1Q7RTM1 612 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 ALG1Q9BT22 464 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 FBXO40Q9UH90 709 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 KCNJ14Q9UNX9 436 aa17.86■□□□□ 0.45
CTSD-207ENST00000636571 TRIM17Q9Y577 477 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms