RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 DIS3Q9Y2L1 958 aaKnown RBP11.32□□□□□ -0.6
LINC00339-210ENST00000635675 KLF18A0A0U1RQI7 1052 aa11.31□□□□□ -0.6
LINC00339-210ENST00000635675 ZBTB5O15062 677 aa11.31□□□□□ -0.6
LINC00339-210ENST00000635675 PPP1R11O60927 126 aaPredicted RBP11.31□□□□□ -0.6
LINC00339-210ENST00000635675 GNAQP50148 359 aa11.31□□□□□ -0.6
LINC00339-210ENST00000635675 RCAN1P53805 252 aa11.31□□□□□ -0.6
LINC00339-210ENST00000635675 FGD1P98174 961 aa11.31□□□□□ -0.6
LINC00339-210ENST00000635675 APOBRQ0VD83 1088 aa11.31□□□□□ -0.6
LINC00339-210ENST00000635675 MICU3Q86XE3 530 aa11.31□□□□□ -0.6
LINC00339-210ENST00000635675 CCDC144CPQ8IYA2 1237 aa11.31□□□□□ -0.6
LINC00339-210ENST00000635675 SRBD1Q8N5C6 995 aaKnown RBP11.31□□□□□ -0.6
LINC00339-210ENST00000635675 MAML3Q96JK9 1138 aa11.31□□□□□ -0.6
LINC00339-210ENST00000635675 PIGSQ96S52 555 aa11.31□□□□□ -0.6
LINC00339-210ENST00000635675 SPZ1Q9BXG8 430 aa11.31□□□□□ -0.6
LINC00339-210ENST00000635675 UPF3BQ9BZI7 483 aaKnown RBP11.31□□□□□ -0.6
LINC00339-210ENST00000635675 A1CFQ9NQ94 594 aaKnown RBP11.31□□□□□ -0.6
LINC00339-210ENST00000635675 KIAA0100Q14667 2235 aaKnown RBP11.31□□□□□ -0.6
LINC00339-210ENST00000635675 PLXNA1Q9UIW2 1896 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 CENPFP49454 3210 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 MYH6P13533 1939 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 PNMA6FA0A0J9YX94 578 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 NFIBO00712 420 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 ZBTB43O43298 467 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 PLEKHA8P1O95397 391 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 MYCP01106 439 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-210ENST00000635675 CCL5P13501 91 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 CACNB2Q08289 660 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-210ENST00000635675 TOB2Q14106 344 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-210ENST00000635675 USH1GQ495M9 461 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 MFSD14CQ5VZR4 134 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 TMTC3Q6ZXV5 915 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 FBXO11Q86XK2 927 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 FAM133AQ8N9E0 248 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 RGS22Q8NE09 1264 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 FGD4Q96M96 766 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 AMNQ9BXJ7 453 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 UNC93B1Q9H1C4 597 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 FAM217BQ9NTX9 383 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-210ENST00000635675 CYP39A1Q9NYL5 469 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 PFASO15067 1338 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 ABCB11O95342 1321 aa11.3□□□□□ -0.6
LINC00339-210ENST00000635675 POTEB2H3BUK9 544 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 PRKAR2AP13861 404 aaKnown RBP11.29□□□□□ -0.6
LINC00339-210ENST00000635675 CYP2C19P33261 490 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 CNTN2Q02246 1040 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 FUT2Q10981 343 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 PPP2R5BQ15173 497 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 RTN1Q16799 776 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 IFFO2Q5TF58 517 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 MAMDC4Q6UXC1 1216 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 NSMFQ6X4W1 530 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 ZNF467Q7Z7K2 595 aaPredicted RBP11.29□□□□□ -0.6
LINC00339-210ENST00000635675 HOMER1Q86YM7 354 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 CMTR1Q8N1G2 835 aaKnown RBP11.29□□□□□ -0.6
LINC00339-210ENST00000635675 TINF2Q9BSI4 451 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 TMEM106CQ9BVX2 250 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 MAF1Q9H063 256 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 RNF208Q9H0X6 261 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 ALDH8A1Q9H2A2 487 aaPredicted RBP11.29□□□□□ -0.6
LINC00339-210ENST00000635675 PAK6Q9NQU5 681 aaPredicted RBP11.29□□□□□ -0.6
LINC00339-210ENST00000635675 PDRG1Q9NUG6 133 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 RBM28Q9NW13 759 aaKnown RBP11.29□□□□□ -0.6
LINC00339-210ENST00000635675 PCDHA1Q9Y5I3 950 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 RPTORQ8N122 1335 aa11.29□□□□□ -0.6
LINC00339-210ENST00000635675 POTEFA5A3E0 1075 aa11.28□□□□□ -0.6
LINC00339-210ENST00000635675 SOWAHBA6NEL2 793 aa11.28□□□□□ -0.6
LINC00339-210ENST00000635675 OPLAHO14841 1288 aa11.28□□□□□ -0.6
LINC00339-210ENST00000635675 CAPN15O75808 1086 aa11.28□□□□□ -0.6
LINC00339-210ENST00000635675 GJB1P08034 283 aa11.28□□□□□ -0.6
LINC00339-210ENST00000635675 PDIA3P30101 505 aaKnown RBP11.28□□□□□ -0.6
LINC00339-210ENST00000635675 CDC27P30260 824 aa11.28□□□□□ -0.6
LINC00339-210ENST00000635675 SOX10P56693 466 aa11.28□□□□□ -0.6
LINC00339-210ENST00000635675 TRAF1Q13077 416 aa11.28□□□□□ -0.6
LINC00339-210ENST00000635675 BAATQ14032 418 aaPredicted RBP11.28□□□□□ -0.6
LINC00339-210ENST00000635675 MSL3Q8N5Y2 521 aaKnown RBP11.28□□□□□ -0.6
LINC00339-210ENST00000635675 TBC1D5Q92609 795 aa11.28□□□□□ -0.6
LINC00339-210ENST00000635675 RRP36Q96EU6 259 aaKnown RBP11.28□□□□□ -0.6
LINC00339-210ENST00000635675 HMX1Q9NP08 348 aaPredicted RBP11.28□□□□□ -0.6
LINC00339-210ENST00000635675 MRPL11Q9Y3B7 192 aaKnown RBP11.28□□□□□ -0.6
LINC00339-210ENST00000635675 RBBP6Q7Z6E9 1792 aaKnown RBP11.28□□□□□ -0.6
LINC00339-210ENST00000635675 ASTN1O14525 1302 aa11.28□□□□□ -0.6
LINC00339-210ENST00000635675 NID2Q14112 1375 aa11.28□□□□□ -0.6
LINC00339-210ENST00000635675 CCDC196A0A1B0GTZ2 297 aa11.27□□□□□ -0.6
LINC00339-210ENST00000635675 PTPDC1A2A3K4 754 aa11.27□□□□□ -0.6
LINC00339-210ENST00000635675 GOLGA8AA7E2F4 631 aa11.27□□□□□ -0.6
LINC00339-210ENST00000635675 GOLGA8BA8MQT2 603 aa11.27□□□□□ -0.6
LINC00339-210ENST00000635675 SNAI1O95863 264 aaPredicted RBP11.27□□□□□ -0.6
LINC00339-210ENST00000635675 CCND3P30281 292 aaPredicted RBP11.27□□□□□ -0.6
LINC00339-210ENST00000635675 ADD1P35611 737 aaKnown RBP11.27□□□□□ -0.6
LINC00339-210ENST00000635675 METAP2P50579 478 aaKnown RBP eCLIP11.27□□□□□ -0.6
LINC00339-210ENST00000635675 RPS6P62753 249 aaKnown RBP11.27□□□□□ -0.6
LINC00339-210ENST00000635675 SLC30A10Q6XR72 485 aa11.27□□□□□ -0.6
LINC00339-210ENST00000635675 RNF207Q6ZRF8 634 aa11.27□□□□□ -0.6
LINC00339-210ENST00000635675 CCDC82Q8N4S0 544 aa11.27□□□□□ -0.6
LINC00339-210ENST00000635675 TRPV1Q8NER1 839 aa11.27□□□□□ -0.6
LINC00339-210ENST00000635675 PIBF1Q8WXW3 757 aa11.27□□□□□ -0.6
LINC00339-210ENST00000635675 ZNF274Q96GC6 653 aaPredicted RBP11.27□□□□□ -0.6
LINC00339-210ENST00000635675 PURBQ96QR8 312 aaKnown RBP11.27□□□□□ -0.6
LINC00339-210ENST00000635675 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.27□□□□□ -0.6
LINC00339-210ENST00000635675 NAP1L2Q9ULW6 460 aaPredicted RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms