RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.29■□□□□ 0.52
LINC00339-207ENST00000634712 EVI5O60447 810 aa18.28■□□□□ 0.52
LINC00339-207ENST00000634712 SNAI1O95863 264 aaPredicted RBP18.28■□□□□ 0.52
LINC00339-207ENST00000634712 AKR1A1P14550 325 aa18.28■□□□□ 0.52
LINC00339-207ENST00000634712 BAATQ14032 418 aaPredicted RBP18.28■□□□□ 0.52
LINC00339-207ENST00000634712 ARMCX2Q7L311 632 aa18.28■□□□□ 0.52
LINC00339-207ENST00000634712 NUP133Q8WUM0 1156 aa18.28■□□□□ 0.52
LINC00339-207ENST00000634712 ABHD16BQ9H3Z7 469 aa18.28■□□□□ 0.52
LINC00339-207ENST00000634712 SENP2Q9HC62 589 aa18.28■□□□□ 0.52
LINC00339-207ENST00000634712 MAD2L2Q9UI95 211 aa18.28■□□□□ 0.52
LINC00339-207ENST00000634712 FAM184BQ9ULE4 1060 aa18.28■□□□□ 0.52
LINC00339-207ENST00000634712 NR2E3Q9Y5X4 410 aa18.28■□□□□ 0.52
LINC00339-207ENST00000634712 PALM3A6NDB9 673 aaPredicted RBP18.27■□□□□ 0.51
LINC00339-207ENST00000634712 CCDC69A6NI79 296 aa18.27■□□□□ 0.51
LINC00339-207ENST00000634712 NFIBO00712 420 aa18.27■□□□□ 0.51
LINC00339-207ENST00000634712 ZNF865P0CJ78 1059 aaPredicted RBP18.27■□□□□ 0.51
LINC00339-207ENST00000634712 ACVR2BQ13705 512 aa18.27■□□□□ 0.51
LINC00339-207ENST00000634712 KRT32Q14532 448 aa18.27■□□□□ 0.51
LINC00339-207ENST00000634712 GRM4Q14833 912 aa18.27■□□□□ 0.51
LINC00339-207ENST00000634712 RNF207Q6ZRF8 634 aa18.27■□□□□ 0.51
LINC00339-207ENST00000634712 FBXO11Q86XK2 927 aa18.27■□□□□ 0.51
LINC00339-207ENST00000634712 CCDC144CPQ8IYA2 1237 aa18.27■□□□□ 0.51
LINC00339-207ENST00000634712 NEK1Q96PY6 1258 aa18.27■□□□□ 0.51
LINC00339-207ENST00000634712 JMJD4Q9H9V9 463 aa18.27■□□□□ 0.51
LINC00339-207ENST00000634712 ADD3Q9UEY8 706 aaKnown RBP18.27■□□□□ 0.51
LINC00339-207ENST00000634712 SOWAHBA6NEL2 793 aa18.26■□□□□ 0.51
LINC00339-207ENST00000634712 KBTBD13C9JR72 458 aa18.26■□□□□ 0.51
LINC00339-207ENST00000634712 DNM1LO00429 736 aa18.26■□□□□ 0.51
LINC00339-207ENST00000634712 REC8O95072 547 aa18.26■□□□□ 0.51
LINC00339-207ENST00000634712 CALML3P27482 149 aa18.26■□□□□ 0.51
LINC00339-207ENST00000634712 MNX1P50219 401 aaPredicted RBP18.26■□□□□ 0.51
LINC00339-207ENST00000634712 QRICH1Q2TAL8 776 aa18.26■□□□□ 0.51
LINC00339-207ENST00000634712 GJC2Q5T442 439 aaPredicted RBP18.26■□□□□ 0.51
LINC00339-207ENST00000634712 CTCFLQ8NI51 663 aaPredicted RBP18.26■□□□□ 0.51
LINC00339-207ENST00000634712 CLEC4DQ8WXI8 215 aa18.26■□□□□ 0.51
LINC00339-207ENST00000634712 FGD4Q96M96 766 aa18.26■□□□□ 0.51
LINC00339-207ENST00000634712 LY9Q9HBG7 655 aa18.26■□□□□ 0.51
LINC00339-207ENST00000634712 XPNPEP3Q9NQH7 507 aa18.26■□□□□ 0.51
LINC00339-207ENST00000634712 MRPL11Q9Y3B7 192 aaKnown RBP18.26■□□□□ 0.51
LINC00339-207ENST00000634712 ABCB11O95342 1321 aa18.26■□□□□ 0.51
LINC00339-207ENST00000634712 SMCHD1A6NHR9 2005 aa18.25■□□□□ 0.51
LINC00339-207ENST00000634712 KIF5BP33176 963 aa18.25■□□□□ 0.51
LINC00339-207ENST00000634712 TROAPQ12815 778 aa18.25■□□□□ 0.51
LINC00339-207ENST00000634712 MCF2L2Q86YR7 1114 aa18.25■□□□□ 0.51
LINC00339-207ENST00000634712 ZNF654Q8IZM8 581 aa18.25■□□□□ 0.51
LINC00339-207ENST00000634712 MPHOSPH6Q99547 160 aaKnown RBP18.25■□□□□ 0.51
LINC00339-207ENST00000634712 SENP6Q9GZR1 1112 aaPredicted RBP18.25■□□□□ 0.51
LINC00339-207ENST00000634712 SH2B2O14492 632 aaPredicted RBP18.24■□□□□ 0.51
LINC00339-207ENST00000634712 ZBTB5O15062 677 aa18.24■□□□□ 0.51
LINC00339-207ENST00000634712 DDAH1O94760 285 aa18.24■□□□□ 0.51
LINC00339-207ENST00000634712 TRAF1Q13077 416 aa18.24■□□□□ 0.51
LINC00339-207ENST00000634712 SYNE3Q6ZMZ3 975 aa18.24■□□□□ 0.51
LINC00339-207ENST00000634712 RNF180Q86T96 592 aa18.24■□□□□ 0.51
LINC00339-207ENST00000634712 HOMER1Q86YM7 354 aa18.24■□□□□ 0.51
LINC00339-207ENST00000634712 RGS22Q8NE09 1264 aa18.24■□□□□ 0.51
LINC00339-207ENST00000634712 AMNQ9BXJ7 453 aa18.24■□□□□ 0.51
LINC00339-207ENST00000634712 GPHNQ9NQX3 736 aaPredicted RBP18.24■□□□□ 0.51
LINC00339-207ENST00000634712 B4DLN1 442 aa18.23■□□□□ 0.51
LINC00339-207ENST00000634712 CALM1P0DP23 149 aa18.23■□□□□ 0.51
LINC00339-207ENST00000634712 CALM2P0DP24 149 aa18.23■□□□□ 0.51
LINC00339-207ENST00000634712 CALM3P0DP25 149 aa18.23■□□□□ 0.51
LINC00339-207ENST00000634712 COL6A1P12109 1028 aa18.23■□□□□ 0.51
LINC00339-207ENST00000634712 LIFRP42702 1097 aa18.23■□□□□ 0.51
LINC00339-207ENST00000634712 MRPL12P52815 198 aaKnown RBP18.23■□□□□ 0.51
LINC00339-207ENST00000634712 RPS6P62753 249 aaKnown RBP18.23■□□□□ 0.51
LINC00339-207ENST00000634712 CCDC144BQ3MJ40 725 aa18.23■□□□□ 0.51
LINC00339-207ENST00000634712 TSGA10IPQ3SY00 556 aa18.23■□□□□ 0.51
LINC00339-207ENST00000634712 NOL8Q76FK4 1167 aaKnown RBP18.23■□□□□ 0.51
LINC00339-207ENST00000634712 PURBQ96QR8 312 aaKnown RBP18.23■□□□□ 0.51
LINC00339-207ENST00000634712 MAP3K14Q99558 947 aa18.23■□□□□ 0.51
LINC00339-207ENST00000634712 LRRC2Q9BYS8 371 aa18.23■□□□□ 0.51
LINC00339-207ENST00000634712 MAF1Q9H063 256 aa18.23■□□□□ 0.51
LINC00339-207ENST00000634712 SPC25Q9HBM1 224 aa18.23■□□□□ 0.51
LINC00339-207ENST00000634712 SLC12A7Q9Y666 1083 aa18.23■□□□□ 0.51
LINC00339-207ENST00000634712 H0YGN5 161 aa18.22■□□□□ 0.51
LINC00339-207ENST00000634712 PGK1P00558 417 aa18.22■□□□□ 0.51
LINC00339-207ENST00000634712 HMGB1P09429 215 aaKnown RBP18.22■□□□□ 0.51
LINC00339-207ENST00000634712 GNAQP50148 359 aa18.22■□□□□ 0.51
LINC00339-207ENST00000634712 ALDH5A1P51649 535 aaPredicted RBP18.22■□□□□ 0.51
LINC00339-207ENST00000634712 FGD1P98174 961 aa18.22■□□□□ 0.51
LINC00339-207ENST00000634712 LRRC41Q15345 812 aa18.22■□□□□ 0.51
LINC00339-207ENST00000634712 SLC30A10Q6XR72 485 aa18.22■□□□□ 0.51
LINC00339-207ENST00000634712 DHX32Q7L7V1 743 aaKnown RBP18.22■□□□□ 0.51
LINC00339-207ENST00000634712 RASEFQ8IZ41 740 aa18.22■□□□□ 0.51
LINC00339-207ENST00000634712 MYL10Q9BUA6 226 aa18.22■□□□□ 0.51
LINC00339-207ENST00000634712 RIOX1Q9H6W3 641 aa18.22■□□□□ 0.51
LINC00339-207ENST00000634712 LOC102724159A0A0B4J2E5 919 aa18.21■□□□□ 0.51
LINC00339-207ENST00000634712 DUSP11O75319 330 aaKnown RBP18.21■□□□□ 0.51
LINC00339-207ENST00000634712 PWP2Q15269 919 aaKnown RBP18.21■□□□□ 0.51
LINC00339-207ENST00000634712 EEPD1Q7L9B9 569 aa18.21■□□□□ 0.51
LINC00339-207ENST00000634712 C7orf61Q8IZ16 206 aa18.21■□□□□ 0.51
LINC00339-207ENST00000634712 DNERQ8NFT8 737 aa18.21■□□□□ 0.51
LINC00339-207ENST00000634712 MTMR8Q96EF0 704 aa18.21■□□□□ 0.51
LINC00339-207ENST00000634712 PIGSQ96S52 555 aa18.21■□□□□ 0.51
LINC00339-207ENST00000634712 LZTS2Q9BRK4 669 aa18.21■□□□□ 0.51
LINC00339-207ENST00000634712 PCDHA1Q9Y5I3 950 aa18.21■□□□□ 0.51
LINC00339-207ENST00000634712 FRMPD3Q5JV73 1810 aa18.21■□□□□ 0.51
LINC00339-207ENST00000634712 MCM3APO60318 1980 aa18.2■□□□□ 0.5
LINC00339-207ENST00000634712 MYH6P13533 1939 aa18.2■□□□□ 0.5
LINC00339-207ENST00000634712 PNMA6FA0A0J9YX94 578 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms