RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 SREBF2Q12772 1141 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 NR5A1Q13285 461 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 MUM1L1Q5H9M0 696 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 MB21D1Q8N884 522 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 CCDC148Q8NFR7 591 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 RASGRP4Q8TDF6 673 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 SMCR8Q8TEV9 937 aaPredicted RBP16.98■□□□□ 0.31
LIMS4-203ENST00000632758 CCDC12Q8WUD4 166 aaPredicted RBP16.98■□□□□ 0.31
LIMS4-203ENST00000632758 CLEC4DQ8WXI8 215 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 R3HDMLQ9H3Y0 253 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 HOMER2Q9NSB8 354 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 PCDHA4Q9UN74 947 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 WDR33Q9C0J8 1336 aaKnown RBP16.98■□□□□ 0.31
LIMS4-203ENST00000632758 NOM1Q5C9Z4 860 aaKnown RBP16.98■□□□□ 0.31
LIMS4-203ENST00000632758 PPP1R18Q6NYC8 613 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 BLIDQ8IZY5 108 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 RGS22Q8NE09 1264 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 TRERF1Q96PN7 1200 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 TEX13BQ9BXU2 312 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 PSTPIP2Q9H939 334 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 C6orf50Q9HD87 102 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 MRPL11Q9Y3B7 192 aaKnown RBP16.98■□□□□ 0.31
LIMS4-203ENST00000632758 RABGAP1Q9Y3P9 1069 aa16.98■□□□□ 0.31
LIMS4-203ENST00000632758 ABCB11O95342 1321 aa16.97■□□□□ 0.31
LIMS4-203ENST00000632758 ESYT2A0FGR8 921 aa16.97■□□□□ 0.31
LIMS4-203ENST00000632758 NFIBO00712 420 aa16.97■□□□□ 0.31
LIMS4-203ENST00000632758 F13A1P00488 732 aa16.97■□□□□ 0.31
LIMS4-203ENST00000632758 KRT2P35908 639 aa16.97■□□□□ 0.31
LIMS4-203ENST00000632758 RESTQ13127 1097 aa16.97■□□□□ 0.31
LIMS4-203ENST00000632758 SAFBQ15424 915 aaKnown RBP eCLIP16.97■□□□□ 0.31
LIMS4-203ENST00000632758 TAF1CQ15572 869 aaPredicted RBP16.97■□□□□ 0.31
LIMS4-203ENST00000632758 UBE2SQ16763 222 aa16.97■□□□□ 0.31
LIMS4-203ENST00000632758 FAM173BQ6P4H8 233 aa16.97■□□□□ 0.31
LIMS4-203ENST00000632758 USP17L6PQ6QN14 398 aa16.97■□□□□ 0.31
LIMS4-203ENST00000632758 ANKRD13CQ8N6S4 541 aa16.97■□□□□ 0.31
LIMS4-203ENST00000632758 PARK7Q99497 189 aaKnown RBP16.97■□□□□ 0.31
LIMS4-203ENST00000632758 SPATC1LQ9H0A9 340 aa16.97■□□□□ 0.31
LIMS4-203ENST00000632758 RIC8AQ9NPQ8 531 aa16.97■□□□□ 0.31
LIMS4-203ENST00000632758 TMEM260Q9NX78 707 aa16.97■□□□□ 0.31
LIMS4-203ENST00000632758 BIN2Q9UBW5 565 aaPredicted RBP16.97■□□□□ 0.31
LIMS4-203ENST00000632758 PARP14Q460N5 1801 aa16.97■□□□□ 0.31
LIMS4-203ENST00000632758 M0R2N6 131 aa16.96■□□□□ 0.31
LIMS4-203ENST00000632758 PDIA4P13667 645 aaKnown RBP16.96■□□□□ 0.31
LIMS4-203ENST00000632758 CALML3P27482 149 aa16.96■□□□□ 0.31
LIMS4-203ENST00000632758 GNA11P29992 359 aa16.96■□□□□ 0.31
LIMS4-203ENST00000632758 ADCY7P51828 1080 aa16.96■□□□□ 0.31
LIMS4-203ENST00000632758 C1QTNF8P60827 252 aa16.96■□□□□ 0.31
LIMS4-203ENST00000632758 TRAF1Q13077 416 aa16.96■□□□□ 0.31
LIMS4-203ENST00000632758 FOXD4L6Q3SYB3 417 aaPredicted RBP16.96■□□□□ 0.31
LIMS4-203ENST00000632758 EARS2Q5JPH6 523 aaKnown RBP16.96■□□□□ 0.31
LIMS4-203ENST00000632758 FOXD4L3Q6VB84 417 aaPredicted RBP16.96■□□□□ 0.31
LIMS4-203ENST00000632758 DAGLBQ8NCG7 672 aa16.96■□□□□ 0.31
LIMS4-203ENST00000632758 CHAMP1Q96JM3 812 aa16.96■□□□□ 0.31
LIMS4-203ENST00000632758 MOV10L1Q9BXT6 1211 aaKnown RBP16.96■□□□□ 0.31
LIMS4-203ENST00000632758 ZCCHC17Q9NP64 241 aaKnown RBP16.96■□□□□ 0.31
LIMS4-203ENST00000632758 RNF146Q9NTX7 359 aa16.96■□□□□ 0.31
LIMS4-203ENST00000632758 PCDHA6Q9UN73 950 aa16.96■□□□□ 0.31
LIMS4-203ENST00000632758 PCDHA8Q9Y5H6 950 aa16.96■□□□□ 0.31
LIMS4-203ENST00000632758 MYH6P13533 1939 aa16.96■□□□□ 0.31
LIMS4-203ENST00000632758 MEIS2O14770 477 aa16.95■□□□□ 0.3
LIMS4-203ENST00000632758 U2AF2P26368 475 aaKnown RBP eCLIP16.95■□□□□ 0.3
LIMS4-203ENST00000632758 MRPL12P52815 198 aaKnown RBP16.95■□□□□ 0.3
LIMS4-203ENST00000632758 ERVK-9P63128 1117 aa16.95■□□□□ 0.3
LIMS4-203ENST00000632758 ERVK-24P63145 666 aa16.95■□□□□ 0.3
LIMS4-203ENST00000632758 JAKMIP3Q5VZ66 844 aa16.95■□□□□ 0.3
LIMS4-203ENST00000632758 GALNT17Q6IS24 598 aa16.95■□□□□ 0.3
LIMS4-203ENST00000632758 RIOX2Q8IUF8 465 aa16.95■□□□□ 0.3
LIMS4-203ENST00000632758 FAM177A1Q8N128 213 aaPredicted RBP16.95■□□□□ 0.3
LIMS4-203ENST00000632758 CUL5Q93034 780 aa16.95■□□□□ 0.3
LIMS4-203ENST00000632758 TNFRSF25Q93038 417 aa16.95■□□□□ 0.3
LIMS4-203ENST00000632758 FOXP1Q9H334 677 aaPredicted RBP16.95■□□□□ 0.3
LIMS4-203ENST00000632758 CPA4Q9UI42 421 aa16.95■□□□□ 0.3
LIMS4-203ENST00000632758 SMCHD1A6NHR9 2005 aa16.95■□□□□ 0.3
LIMS4-203ENST00000632758 FAM205CA6NFA0 338 aa16.94■□□□□ 0.3
LIMS4-203ENST00000632758 CFBP00751 764 aa16.94■□□□□ 0.3
LIMS4-203ENST00000632758 HOXA13P31271 388 aaPredicted RBP16.94■□□□□ 0.3
LIMS4-203ENST00000632758 GCLCP48506 637 aaPredicted RBP16.94■□□□□ 0.3
LIMS4-203ENST00000632758 GNL2Q13823 731 aaKnown RBP16.94■□□□□ 0.3
LIMS4-203ENST00000632758 GTF3C2Q8WUA4 911 aaPredicted RBP16.94■□□□□ 0.3
LIMS4-203ENST00000632758 PGBD1Q96JS3 809 aa16.94■□□□□ 0.3
LIMS4-203ENST00000632758 BRMS1Q9HCU9 246 aa16.94■□□□□ 0.3
LIMS4-203ENST00000632758 PNMA2Q9UL42 364 aa16.94■□□□□ 0.3
LIMS4-203ENST00000632758 HSPA6P17066 643 aa16.94■□□□□ 0.3
LIMS4-203ENST00000632758 ERCC3P19447 782 aa16.94■□□□□ 0.3
LIMS4-203ENST00000632758 CLK2P49760 499 aaKnown RBP16.94■□□□□ 0.3
LIMS4-203ENST00000632758 CRHR2Q13324 411 aa16.94■□□□□ 0.3
LIMS4-203ENST00000632758 NCAPG2Q86XI2 1143 aa16.94■□□□□ 0.3
LIMS4-203ENST00000632758 GPRC5AQ8NFJ5 357 aa16.94■□□□□ 0.3
LIMS4-203ENST00000632758 TNPO1Q92973 898 aaKnown RBP16.94■□□□□ 0.3
LIMS4-203ENST00000632758 PORCNQ9H237 461 aa16.94■□□□□ 0.3
LIMS4-203ENST00000632758 MORF4L1Q9UBU8 362 aa16.94■□□□□ 0.3
LIMS4-203ENST00000632758 ADGRA2Q96PE1 1338 aa16.93■□□□□ 0.3
LIMS4-203ENST00000632758 MAP2K2P36507 400 aa16.93■□□□□ 0.3
LIMS4-203ENST00000632758 TKFCQ3LXA3 575 aa16.93■□□□□ 0.3
LIMS4-203ENST00000632758 PIK3AP1Q6ZUJ8 805 aa16.93■□□□□ 0.3
LIMS4-203ENST00000632758 NOSTRINQ8IVI9 506 aa16.93■□□□□ 0.3
LIMS4-203ENST00000632758 REXO1Q8N1G1 1221 aaKnown RBP16.93■□□□□ 0.3
LIMS4-203ENST00000632758 BICD2Q8TD16 824 aa16.93■□□□□ 0.3
LIMS4-203ENST00000632758 ZSCAN16Q9H4T2 348 aaPredicted RBP16.93■□□□□ 0.3
LIMS4-203ENST00000632758 ZFYVE28Q9HCC9 887 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms