RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 MSL3Q8N5Y2 521 aaKnown RBP23.27■■□□□ 1.32
PNKP-219ENST00000626274 TINF2Q9BSI4 451 aa23.27■■□□□ 1.32
PNKP-219ENST00000626274 POTEB2H3BUK9 544 aa23.26■■□□□ 1.31
PNKP-219ENST00000626274 EIF5BO60841 1220 aaKnown RBP23.26■■□□□ 1.31
PNKP-219ENST00000626274 PSMA5P28066 241 aa23.26■■□□□ 1.31
PNKP-219ENST00000626274 MLLT1Q03111 559 aaPredicted RBP23.26■■□□□ 1.31
PNKP-219ENST00000626274 USH1GQ495M9 461 aa23.26■■□□□ 1.31
PNKP-219ENST00000626274 BLOC1S2Q6QNY1 142 aa23.26■■□□□ 1.31
PNKP-219ENST00000626274 NSMFQ6X4W1 530 aa23.26■■□□□ 1.31
PNKP-219ENST00000626274 FAM133AQ8N9E0 248 aa23.26■■□□□ 1.31
PNKP-219ENST00000626274 SHISA4Q96DD7 197 aa23.26■■□□□ 1.31
PNKP-219ENST00000626274 MTMR8Q96EF0 704 aa23.26■■□□□ 1.31
PNKP-219ENST00000626274 RIOX1Q9H6W3 641 aa23.26■■□□□ 1.31
PNKP-219ENST00000626274 CYP39A1Q9NYL5 469 aa23.26■■□□□ 1.31
PNKP-219ENST00000626274 TFRCP02786 760 aaKnown RBP23.25■■□□□ 1.31
PNKP-219ENST00000626274 CYBAP13498 195 aa23.25■■□□□ 1.31
PNKP-219ENST00000626274 SYNE3Q6ZMZ3 975 aa23.25■■□□□ 1.31
PNKP-219ENST00000626274 FBXO11Q86XK2 927 aa23.25■■□□□ 1.31
PNKP-219ENST00000626274 CLEC4DQ8WXI8 215 aa23.25■■□□□ 1.31
PNKP-219ENST00000626274 CRISPLD2Q9H0B8 497 aa23.25■■□□□ 1.31
PNKP-219ENST00000626274 ABCB11O95342 1321 aa23.25■■□□□ 1.31
PNKP-219ENST00000626274 LCTP09848 1927 aa23.24■■□□□ 1.31
PNKP-219ENST00000626274 NFIBO00712 420 aa23.24■■□□□ 1.31
PNKP-219ENST00000626274 CPA1P15085 419 aa23.24■■□□□ 1.31
PNKP-219ENST00000626274 CNGA1P29973 690 aa23.24■■□□□ 1.31
PNKP-219ENST00000626274 GNAQP50148 359 aa23.24■■□□□ 1.31
PNKP-219ENST00000626274 FGD1P98174 961 aa23.24■■□□□ 1.31
PNKP-219ENST00000626274 CNTN2Q02246 1040 aa23.24■■□□□ 1.31
PNKP-219ENST00000626274 SLC35G1Q2M3R5 365 aa23.24■■□□□ 1.31
PNKP-219ENST00000626274 MAMDC4Q6UXC1 1216 aa23.24■■□□□ 1.31
PNKP-219ENST00000626274 TRPV1Q8NER1 839 aa23.24■■□□□ 1.31
PNKP-219ENST00000626274 NRBP1Q9UHY1 535 aa23.24■■□□□ 1.31
PNKP-219ENST00000626274 FRMPD3Q5JV73 1810 aa23.24■■□□□ 1.31
PNKP-219ENST00000626274 ZBTB5O15062 677 aa23.23■■□□□ 1.31
PNKP-219ENST00000626274 CYTH3O43739 400 aa23.23■■□□□ 1.31
PNKP-219ENST00000626274 RXRAP19793 462 aa23.23■■□□□ 1.31
PNKP-219ENST00000626274 CASTP20810 708 aaKnown RBP23.23■■□□□ 1.31
PNKP-219ENST00000626274 SMARCA1P28370 1054 aa23.23■■□□□ 1.31
PNKP-219ENST00000626274 BAATQ14032 418 aaPredicted RBP23.23■■□□□ 1.31
PNKP-219ENST00000626274 PRAMEF19Q5SWL8 479 aa23.23■■□□□ 1.31
PNKP-219ENST00000626274 FGD4Q96M96 766 aa23.23■■□□□ 1.31
PNKP-219ENST00000626274 LZTS2Q9BRK4 669 aa23.23■■□□□ 1.31
PNKP-219ENST00000626274 AMNQ9BXJ7 453 aa23.23■■□□□ 1.31
PNKP-219ENST00000626274 SYNGAP1Q96PV0 1343 aa23.23■■□□□ 1.31
PNKP-219ENST00000626274 MSCO60682 206 aa23.22■■□□□ 1.31
PNKP-219ENST00000626274 RPS6KB1P23443 525 aa23.22■■□□□ 1.31
PNKP-219ENST00000626274 APOA5Q6Q788 366 aa23.22■■□□□ 1.31
PNKP-219ENST00000626274 RNF207Q6ZRF8 634 aa23.22■■□□□ 1.31
PNKP-219ENST00000626274 MICU3Q86XE3 530 aa23.22■■□□□ 1.31
PNKP-219ENST00000626274 HOMER1Q86YM7 354 aa23.22■■□□□ 1.31
PNKP-219ENST00000626274 FANCBQ8NB91 859 aa23.22■■□□□ 1.31
PNKP-219ENST00000626274 PIGSQ96S52 555 aa23.22■■□□□ 1.31
PNKP-219ENST00000626274 SPZ1Q9BXG8 430 aa23.22■■□□□ 1.31
PNKP-219ENST00000626274 DDX20Q9UHI6 824 aaKnown RBP23.22■■□□□ 1.31
PNKP-219ENST00000626274 CNPY2Q9Y2B0 182 aa23.22■■□□□ 1.31
PNKP-219ENST00000626274 PTPDC1A2A3K4 754 aa23.21■■□□□ 1.31
PNKP-219ENST00000626274 SOWAHBA6NEL2 793 aa23.21■■□□□ 1.31
PNKP-219ENST00000626274 TRAF1Q13077 416 aa23.21■■□□□ 1.31
PNKP-219ENST00000626274 RAB11FIP4Q86YS3 637 aa23.21■■□□□ 1.31
PNKP-219ENST00000626274 CCDC144CPQ8IYA2 1237 aa23.21■■□□□ 1.31
PNKP-219ENST00000626274 RGS22Q8NE09 1264 aa23.21■■□□□ 1.31
PNKP-219ENST00000626274 MAF1Q9H063 256 aa23.21■■□□□ 1.31
PNKP-219ENST00000626274 BRPF3Q9ULD4 1205 aa23.21■■□□□ 1.31
PNKP-219ENST00000626274 MRPL11Q9Y3B7 192 aaKnown RBP23.21■■□□□ 1.31
PNKP-219ENST00000626274 PNMA6FA0A0J9YX94 578 aa23.2■■□□□ 1.3
PNKP-219ENST00000626274 SEPT4O43236 478 aa23.2■■□□□ 1.3
PNKP-219ENST00000626274 ZBTB43O43298 467 aa23.2■■□□□ 1.3
PNKP-219ENST00000626274 SNAI1O95863 264 aaPredicted RBP23.2■■□□□ 1.3
PNKP-219ENST00000626274 LHX8Q68G74 356 aa23.2■■□□□ 1.3
PNKP-219ENST00000626274 Q6ZUG5 572 aa23.2■■□□□ 1.3
PNKP-219ENST00000626274 TM6SF1Q9BZW5 370 aa23.2■■□□□ 1.3
PNKP-219ENST00000626274 ZSWIM6Q9HCJ5 1215 aa23.2■■□□□ 1.3
PNKP-219ENST00000626274 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.2■■□□□ 1.3
PNKP-219ENST00000626274 ADD3Q9UEY8 706 aaKnown RBP23.2■■□□□ 1.3
PNKP-219ENST00000626274 OGDHLQ9ULD0 1010 aa23.2■■□□□ 1.3
PNKP-219ENST00000626274 KLF18A0A0U1RQI7 1052 aa23.19■■□□□ 1.3
PNKP-219ENST00000626274 ASB14A6NK59 587 aa23.19■■□□□ 1.3
PNKP-219ENST00000626274 PPP1R11O60927 126 aaPredicted RBP23.19■■□□□ 1.3
PNKP-219ENST00000626274 PLEKHA8P1O95397 391 aa23.19■■□□□ 1.3
PNKP-219ENST00000626274 CALML3P27482 149 aa23.19■■□□□ 1.3
PNKP-219ENST00000626274 RPS6P62753 249 aaKnown RBP23.19■■□□□ 1.3
PNKP-219ENST00000626274 SLC30A10Q6XR72 485 aa23.19■■□□□ 1.3
PNKP-219ENST00000626274 RUFY3Q7L099 469 aa23.19■■□□□ 1.3
PNKP-219ENST00000626274 ARMCX2Q7L311 632 aa23.19■■□□□ 1.3
PNKP-219ENST00000626274 MCF2L2Q86YR7 1114 aa23.19■■□□□ 1.3
PNKP-219ENST00000626274 FBXL16Q8N461 479 aa23.19■■□□□ 1.3
PNKP-219ENST00000626274 ANKLE1Q8NAG6 615 aa23.19■■□□□ 1.3
PNKP-219ENST00000626274 RRP36Q96EU6 259 aaKnown RBP23.19■■□□□ 1.3
PNKP-219ENST00000626274 PCDHA1Q9Y5I3 950 aa23.19■■□□□ 1.3
PNKP-219ENST00000626274 FARP2O94887 1054 aaPredicted RBP23.18■■□□□ 1.3
PNKP-219ENST00000626274 RCAN1P53805 252 aa23.18■■□□□ 1.3
PNKP-219ENST00000626274 SRBD1Q8N5C6 995 aaKnown RBP23.18■■□□□ 1.3
PNKP-219ENST00000626274 BRF1Q92994 677 aa23.18■■□□□ 1.3
PNKP-219ENST00000626274 AGXT2Q9BYV1 514 aa23.18■■□□□ 1.3
PNKP-219ENST00000626274 ABHD16BQ9H3Z7 469 aa23.18■■□□□ 1.3
PNKP-219ENST00000626274 RBM28Q9NW13 759 aaKnown RBP23.18■■□□□ 1.3
PNKP-219ENST00000626274 CYP46A1Q9Y6A2 500 aa23.18■■□□□ 1.3
PNKP-219ENST00000626274 ASTN1O14525 1302 aa23.17■■□□□ 1.3
PNKP-219ENST00000626274 ZNF865P0CJ78 1059 aaPredicted RBP23.17■■□□□ 1.3
PNKP-219ENST00000626274 RTN1Q16799 776 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms