RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 CCDC69A6NI79 296 aa14.36□□□□□ -0.11
CBWD3-218ENST00000622755 KIF5BP33176 963 aa14.36□□□□□ -0.11
CBWD3-218ENST00000622755 ACVR2BQ13705 512 aa14.36□□□□□ -0.11
CBWD3-218ENST00000622755 KRT32Q14532 448 aa14.36□□□□□ -0.11
CBWD3-218ENST00000622755 PWP2Q15269 919 aaKnown RBP14.36□□□□□ -0.11
CBWD3-218ENST00000622755 SEC23AQ15436 765 aa14.36□□□□□ -0.11
CBWD3-218ENST00000622755 CDC37Q16543 378 aaPredicted RBP14.36□□□□□ -0.11
CBWD3-218ENST00000622755 USH1GQ495M9 461 aa14.36□□□□□ -0.11
CBWD3-218ENST00000622755 SYNE3Q6ZMZ3 975 aa14.36□□□□□ -0.11
CBWD3-218ENST00000622755 RNF207Q6ZRF8 634 aa14.36□□□□□ -0.11
CBWD3-218ENST00000622755 CYB5R4Q7L1T6 521 aa14.36□□□□□ -0.11
CBWD3-218ENST00000622755 ARMCX2Q7L311 632 aa14.36□□□□□ -0.11
CBWD3-218ENST00000622755 TRPV1Q8NER1 839 aa14.36□□□□□ -0.11
CBWD3-218ENST00000622755 CTCFLQ8NI51 663 aaPredicted RBP14.36□□□□□ -0.11
CBWD3-218ENST00000622755 DIS3LQ8TF46 1054 aaKnown RBP14.36□□□□□ -0.11
CBWD3-218ENST00000622755 SENP6Q9GZR1 1112 aaPredicted RBP14.36□□□□□ -0.11
CBWD3-218ENST00000622755 UBA5Q9GZZ9 404 aa14.36□□□□□ -0.11
CBWD3-218ENST00000622755 LSG1Q9H089 658 aaKnown RBP14.36□□□□□ -0.11
CBWD3-218ENST00000622755 CYP39A1Q9NYL5 469 aa14.36□□□□□ -0.11
CBWD3-218ENST00000622755 KLRF2D3W0D1 207 aa14.35□□□□□ -0.11
CBWD3-218ENST00000622755 REC8O95072 547 aa14.35□□□□□ -0.11
CBWD3-218ENST00000622755 CALM1P0DP23 149 aa14.35□□□□□ -0.11
CBWD3-218ENST00000622755 CALM2P0DP24 149 aa14.35□□□□□ -0.11
CBWD3-218ENST00000622755 CALM3P0DP25 149 aa14.35□□□□□ -0.11
CBWD3-218ENST00000622755 MUM1L1Q5H9M0 696 aa14.35□□□□□ -0.11
CBWD3-218ENST00000622755 ANO1Q5XXA6 986 aa14.35□□□□□ -0.11
CBWD3-218ENST00000622755 CREB3L3Q68CJ9 461 aa14.35□□□□□ -0.11
CBWD3-218ENST00000622755 NOL8Q76FK4 1167 aaKnown RBP14.35□□□□□ -0.11
CBWD3-218ENST00000622755 FBXO11Q86XK2 927 aa14.35□□□□□ -0.11
CBWD3-218ENST00000622755 ADGRF4Q8IZF3 695 aa14.35□□□□□ -0.11
CBWD3-218ENST00000622755 FAM133AQ8N9E0 248 aa14.35□□□□□ -0.11
CBWD3-218ENST00000622755 VAT1LQ9HCJ6 419 aa14.35□□□□□ -0.11
CBWD3-218ENST00000622755 PRKAG2Q9UGJ0 569 aa14.35□□□□□ -0.11
CBWD3-218ENST00000622755 MRPL11Q9Y3B7 192 aaKnown RBP14.35□□□□□ -0.11
CBWD3-218ENST00000622755 SLC27A2O14975 620 aa14.34□□□□□ -0.11
CBWD3-218ENST00000622755 PRC1O43663 620 aa14.34□□□□□ -0.11
CBWD3-218ENST00000622755 IGHA2P01877 340 aa14.34□□□□□ -0.11
CBWD3-218ENST00000622755 CALML3P27482 149 aa14.34□□□□□ -0.11
CBWD3-218ENST00000622755 GNAQP50148 359 aa14.34□□□□□ -0.11
CBWD3-218ENST00000622755 GJC2Q5T442 439 aaPredicted RBP14.34□□□□□ -0.11
CBWD3-218ENST00000622755 CCDC144CPQ8IYA2 1237 aa14.34□□□□□ -0.11
CBWD3-218ENST00000622755 C7orf61Q8IZ16 206 aa14.34□□□□□ -0.11
CBWD3-218ENST00000622755 NUP133Q8WUM0 1156 aa14.34□□□□□ -0.11
CBWD3-218ENST00000622755 AMNQ9BXJ7 453 aa14.34□□□□□ -0.11
CBWD3-218ENST00000622755 H0YGN5 161 aa14.33□□□□□ -0.11
CBWD3-218ENST00000622755 DDAH1O94760 285 aa14.33□□□□□ -0.11
CBWD3-218ENST00000622755 HMGB1P09429 215 aaKnown RBP14.33□□□□□ -0.11
CBWD3-218ENST00000622755 ZNF865P0CJ78 1059 aaPredicted RBP14.33□□□□□ -0.11
CBWD3-218ENST00000622755 FGD1P98174 961 aa14.33□□□□□ -0.11
CBWD3-218ENST00000622755 CNTN2Q02246 1040 aa14.33□□□□□ -0.11
CBWD3-218ENST00000622755 BAATQ14032 418 aaPredicted RBP14.33□□□□□ -0.11
CBWD3-218ENST00000622755 NECTIN1Q15223 517 aa14.33□□□□□ -0.11
CBWD3-218ENST00000622755 CHST3Q7LGC8 479 aa14.33□□□□□ -0.11
CBWD3-218ENST00000622755 MB21D2Q8IYB1 491 aaPredicted RBP14.33□□□□□ -0.11
CBWD3-218ENST00000622755 DNERQ8NFT8 737 aa14.33□□□□□ -0.11
CBWD3-218ENST00000622755 TNRC18O15417 2968 aaPredicted RBP14.33□□□□□ -0.12
CBWD3-218ENST00000622755 NFIBO00712 420 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 EIF5BO60841 1220 aaKnown RBP14.32□□□□□ -0.12
CBWD3-218ENST00000622755 DUSP11O75319 330 aaKnown RBP14.32□□□□□ -0.12
CBWD3-218ENST00000622755 SNAI1O95863 264 aaPredicted RBP14.32□□□□□ -0.12
CBWD3-218ENST00000622755 PDE4DQ08499 809 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 GRM4Q14833 912 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 LRRC41Q15345 812 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 CCDC144BQ3MJ40 725 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 PCSK9Q8NBP7 692 aaKnown RBP14.32□□□□□ -0.12
CBWD3-218ENST00000622755 RGS22Q8NE09 1264 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 NEK1Q96PY6 1258 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 MAP3K14Q99558 947 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 LZTS2Q9BRK4 669 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 AP5M1Q9H0R1 490 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 VTA1Q9NP79 307 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 SEC63Q9UGP8 760 aaKnown RBP14.32□□□□□ -0.12
CBWD3-218ENST00000622755 SLC12A7Q9Y666 1083 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 ZBTB5O15062 677 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 ZEB2O60315 1214 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 C6orf222P0C671 652 aaPredicted RBP14.32□□□□□ -0.12
CBWD3-218ENST00000622755 COL6A1P12109 1028 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 TAL1P17542 331 aaPredicted RBP14.32□□□□□ -0.12
CBWD3-218ENST00000622755 ALDH5A1P51649 535 aaPredicted RBP14.32□□□□□ -0.12
CBWD3-218ENST00000622755 TNFAIP2Q03169 654 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 QRICH1Q2TAL8 776 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 STOX1Q6ZVD7 989 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 SKAP1Q86WV1 359 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 HOMER1Q86YM7 354 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 ZNF654Q8IZM8 581 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 TSEN34Q9BSV6 310 aaKnown RBP14.32□□□□□ -0.12
CBWD3-218ENST00000622755 JMJD4Q9H9V9 463 aa14.32□□□□□ -0.12
CBWD3-218ENST00000622755 MCM3APO60318 1980 aa14.31□□□□□ -0.12
CBWD3-218ENST00000622755 PALM3A6NDB9 673 aaPredicted RBP14.31□□□□□ -0.12
CBWD3-218ENST00000622755 SOWAHBA6NEL2 793 aa14.31□□□□□ -0.12
CBWD3-218ENST00000622755 MOXD2PA6NHM9 499 aa14.31□□□□□ -0.12
CBWD3-218ENST00000622755 PGK1P00558 417 aa14.31□□□□□ -0.12
CBWD3-218ENST00000622755 LIFRP42702 1097 aa14.31□□□□□ -0.12
CBWD3-218ENST00000622755 RPS6P62753 249 aaKnown RBP14.31□□□□□ -0.12
CBWD3-218ENST00000622755 BRDTQ58F21 947 aaPredicted RBP14.31□□□□□ -0.12
CBWD3-218ENST00000622755 IQSEC1Q6DN90 963 aa14.31□□□□□ -0.12
CBWD3-218ENST00000622755 SAMD3Q8N6K7 520 aa14.31□□□□□ -0.12
CBWD3-218ENST00000622755 IGDCC4Q8TDY8 1250 aa14.31□□□□□ -0.12
CBWD3-218ENST00000622755 VTI1AQ96AJ9 217 aa14.31□□□□□ -0.12
CBWD3-218ENST00000622755 CPVLQ9H3G5 476 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms