RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SNX12Q9UMY4 172 aa21.86■■□□□ 1.09
PDLIM3-212ENST00000620787 MIIPQ5JXC2 388 aa21.85■■□□□ 1.09
PDLIM3-212ENST00000620787 ZNF572Q7Z3I7 529 aaPredicted RBP21.85■■□□□ 1.09
PDLIM3-212ENST00000620787 EEF2KMTQ96G04 330 aa21.85■■□□□ 1.09
PDLIM3-212ENST00000620787 CNOT6LQ96LI5 555 aaKnown RBP21.85■■□□□ 1.09
PDLIM3-212ENST00000620787 TAF1P21675 1872 aa21.85■■□□□ 1.09
PDLIM3-212ENST00000620787 KIF5AQ12840 1032 aa21.85■■□□□ 1.09
PDLIM3-212ENST00000620787 P2RX5Q93086 422 aa21.85■■□□□ 1.09
PDLIM3-212ENST00000620787 TSGA10Q9BZW7 698 aa21.85■■□□□ 1.09
PDLIM3-212ENST00000620787 SH3GLB2Q9NR46 395 aa21.85■■□□□ 1.09
PDLIM3-212ENST00000620787 LRWD1Q9UFC0 647 aa21.85■■□□□ 1.09
PDLIM3-212ENST00000620787 A0A1W2PQJ5 194 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 GOLGA6CA6NDK9 693 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 NUTM2BA6NNL0 878 aaPredicted RBP21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 NUTM2EB1AL46 878 aaPredicted RBP21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 GOLGA6DP0CG33 693 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 CCNE1P24864 410 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 UBA7P41226 1012 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 EZH2Q15910 746 aaKnown RBP21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 FIGNQ5HY92 759 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 RCSD1Q6JBY9 416 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 AMOTL1Q8IY63 956 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 EFCAB13Q8IY85 973 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 SMCR8Q8TEV9 937 aaPredicted RBP21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 GOLGA6AQ9NYA3 693 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 CASZ1Q86V15 1759 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 NTSR2O95665 410 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 ANKRD40Q6AI12 368 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 TYW1BQ6NUM6 668 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 KRT26Q7Z3Y9 468 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 ERGIC2Q96RQ1 377 aa21.84■■□□□ 1.09
PDLIM3-212ENST00000620787 CPP00450 1065 aa21.83■■□□□ 1.09
PDLIM3-212ENST00000620787 ITIH3Q06033 890 aa21.83■■□□□ 1.09
PDLIM3-212ENST00000620787 ZSCAN29Q8IWY8 852 aaPredicted RBP21.83■■□□□ 1.09
PDLIM3-212ENST00000620787 HDAC7Q8WUI4 952 aa21.83■■□□□ 1.09
PDLIM3-212ENST00000620787 HINFPQ9BQA5 517 aa21.83■■□□□ 1.09
PDLIM3-212ENST00000620787 JRKLQ9Y4A0 524 aa21.83■■□□□ 1.09
PDLIM3-212ENST00000620787 CAPN6Q9Y6Q1 641 aa21.83■■□□□ 1.09
PDLIM3-212ENST00000620787 PLEKP08567 350 aaPredicted RBP21.83■■□□□ 1.08
PDLIM3-212ENST00000620787 KIF5BP33176 963 aa21.83■■□□□ 1.08
PDLIM3-212ENST00000620787 IRAK1P51617 712 aa21.83■■□□□ 1.08
PDLIM3-212ENST00000620787 CCDC70Q6NSX1 233 aa21.83■■□□□ 1.08
PDLIM3-212ENST00000620787 TRIM58Q8NG06 486 aa21.83■■□□□ 1.08
PDLIM3-212ENST00000620787 RUBCNQ92622 972 aa21.83■■□□□ 1.08
PDLIM3-212ENST00000620787 RRP36Q96EU6 259 aaKnown RBP21.83■■□□□ 1.08
PDLIM3-212ENST00000620787 PCMTD1Q96MG8 357 aaPredicted RBP21.83■■□□□ 1.08
PDLIM3-212ENST00000620787 DCP1AQ9NPI6 582 aaPredicted RBP21.83■■□□□ 1.08
PDLIM3-212ENST00000620787 DMGDHQ9UI17 866 aaKnown RBP21.83■■□□□ 1.08
PDLIM3-212ENST00000620787 FLT1P17948 1338 aa21.83■■□□□ 1.08
PDLIM3-212ENST00000620787 CCDC194A0A1B0GVG4 234 aa21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 NKRFO15226 690 aaKnown RBP eCLIP21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 CYP2D6P10635 497 aa21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 MTIF2P46199 727 aaKnown RBP21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 PARP10Q53GL7 1025 aa21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 SND1Q7KZF4 910 aaKnown RBP eCLIP21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 FAM114A1Q8IWE2 563 aa21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 SH3GL2Q99962 352 aa21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 LRRC1Q9BTT6 524 aa21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 NOC4LQ9BVI4 516 aaKnown RBP21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 SH2D4AQ9H788 454 aa21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 PCDHA6Q9UN73 950 aa21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 PCDHA8Q9Y5H6 950 aa21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 BICDL2A1A5D9 508 aa21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 PPFIA1Q13136 1202 aa21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 CCDC96Q2M329 555 aa21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 ICE2Q659A1 982 aa21.82■■□□□ 1.08
PDLIM3-212ENST00000620787 SPA17Q15506 151 aa21.81■■□□□ 1.08
PDLIM3-212ENST00000620787 INF2Q27J81 1249 aa21.81■■□□□ 1.08
PDLIM3-212ENST00000620787 PLCD3Q8N3E9 789 aa21.81■■□□□ 1.08
PDLIM3-212ENST00000620787 CCDC42Q96M95 316 aa21.81■■□□□ 1.08
PDLIM3-212ENST00000620787 MLXIPQ9HAP2 919 aa21.81■■□□□ 1.08
PDLIM3-212ENST00000620787 TACC1O75410 805 aa21.81■■□□□ 1.08
PDLIM3-212ENST00000620787 CAMTA2O94983 1202 aa21.81■■□□□ 1.08
PDLIM3-212ENST00000620787 PRLRP16471 622 aa21.81■■□□□ 1.08
PDLIM3-212ENST00000620787 HNRNPH3P31942 346 aaKnown RBP21.81■■□□□ 1.08
PDLIM3-212ENST00000620787 STK4Q13043 487 aa21.81■■□□□ 1.08
PDLIM3-212ENST00000620787 UBE4AQ14139 1066 aa21.81■■□□□ 1.08
PDLIM3-212ENST00000620787 INTS5Q6P9B9 1019 aaKnown RBP21.81■■□□□ 1.08
PDLIM3-212ENST00000620787 TADA2BQ86TJ2 420 aa21.81■■□□□ 1.08
PDLIM3-212ENST00000620787 A0A087WUV0 522 aaPredicted RBP21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 PLCG1P19174 1290 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 PDE4DQ08499 809 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 SKIDA1Q1XH10 827 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 STAG2Q8N3U4 1231 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 SPATA4Q8NEY3 305 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 NSUN4Q96CB9 384 aaKnown RBP21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 IFIH1Q9BYX4 1025 aaKnown RBP21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 TRIM9Q9C026 710 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 CUEDC2Q9H467 287 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 MAGEF1Q9HAY2 307 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 ARHGAP20Q9P2F6 1191 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 PCDHA13Q9Y5I0 950 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 GRIN2DO15399 1336 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 TSPY2A6NKD2 308 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 USO1O60763 962 aaKnown RBP21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 PRPHP41219 470 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 CCT5P48643 541 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 CCDC178Q5BJE1 867 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 DAGLBQ8NCG7 672 aa21.8■■□□□ 1.08
PDLIM3-212ENST00000620787 EHD4Q9H223 541 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms